RNA–Protein interactions for RNA: ENST00000424527.5

PCCA-205, Transcript of propionyl-CoA carboxylase subunit alpha, human

TSL 3

Gene PCCA, Length 447 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PCCA-205	ENST00000424527	SNX15	Q9NRS6	342 aa		4.88	□□□□□ -1.63
PCCA-205	ENST00000424527	SPATS2L	Q9NUQ6	558 aa	Known RBP	4.88	□□□□□ -1.63
PCCA-205	ENST00000424527	ZDHHC7	Q9NXF8	308 aa		4.88	□□□□□ -1.63
PCCA-205	ENST00000424527	AKAP7	Q9P0M2	348 aa	Predicted RBP	4.88	□□□□□ -1.63
PCCA-205	ENST00000424527	EXTL2	Q9UBQ6	330 aa		4.88	□□□□□ -1.63
PCCA-205	ENST00000424527	AMACR	Q9UHK6	382 aa		4.88	□□□□□ -1.63
PCCA-205	ENST00000424527	TUBE1	Q9UJT0	475 aa		4.88	□□□□□ -1.63
PCCA-205	ENST00000424527	CDYL	Q9Y232	598 aa		4.88	□□□□□ -1.63
PCCA-205	ENST00000424527	ATP11B	Q9Y2G3	1177 aa		4.88	□□□□□ -1.63
PCCA-205	ENST00000424527	TRIM17	Q9Y577	477 aa		4.88	□□□□□ -1.63
PCCA-205	ENST00000424527	COL15A1	P39059	1388 aa		4.88	□□□□□ -1.63
PCCA-205	ENST00000424527	PLA2R1	Q13018	1463 aa		4.88	□□□□□ -1.63
PCCA-205	ENST00000424527	SCAF11	Q99590	1463 aa	Known RBP	4.88	□□□□□ -1.63
PCCA-205	ENST00000424527	TRPM2	O94759	1503 aa		4.87	□□□□□ -1.63
PCCA-205	ENST00000424527	LTBP4	Q8N2S1	1624 aa		4.87	□□□□□ -1.63
PCCA-205	ENST00000424527		A0A0G2JNJ9	132 aa		4.87	□□□□□ -1.63
PCCA-205	ENST00000424527	FAM237B	A0A1B0GVD1	139 aa		4.87	□□□□□ -1.63
PCCA-205	ENST00000424527	TCRBV21S2A2	A0A5A6	115 aa		4.87	□□□□□ -1.63
PCCA-205	ENST00000424527	FRMD3	A2A2Y4	597 aa		4.87	□□□□□ -1.63
PCCA-205	ENST00000424527	PRSS29P	A6NIE9	313 aa		4.87	□□□□□ -1.63
PCCA-205	ENST00000424527	TEX22	C9J3V5	150 aa		4.87	□□□□□ -1.63
PCCA-205	ENST00000424527	OVOL3	O00110	214 aa		4.87	□□□□□ -1.63
PCCA-205	ENST00000424527	KIN	O60870	393 aa	Known RBP	4.87	□□□□□ -1.63
PCCA-205	ENST00000424527	PALM	O75781	387 aa		4.87	□□□□□ -1.63
PCCA-205	ENST00000424527	RB1	P06400	928 aa		4.87	□□□□□ -1.63
PCCA-205	ENST00000424527	ATXN1L	P0C7T5	689 aa	Known RBP	4.87	□□□□□ -1.63
PCCA-205	ENST00000424527	RARG	P13631	454 aa		4.87	□□□□□ -1.63
PCCA-205	ENST00000424527	TFEB	P19484	476 aa		4.87	□□□□□ -1.63
PCCA-205	ENST00000424527	CAST	P20810	708 aa	Known RBP	4.87	□□□□□ -1.63
PCCA-205	ENST00000424527	FPR1	P21462	350 aa		4.87	□□□□□ -1.63
PCCA-205	ENST00000424527	IGFBP6	P24592	240 aa	Predicted RBP	4.87	□□□□□ -1.63
PCCA-205	ENST00000424527	HOXC8	P31273	242 aa		4.87	□□□□□ -1.63
PCCA-205	ENST00000424527	SLC15A1	P46059	708 aa		4.87	□□□□□ -1.63
PCCA-205	ENST00000424527	PIP4K2A	P48426	406 aa	Predicted RBP	4.87	□□□□□ -1.63
PCCA-205	ENST00000424527	ANTXR2	P58335	489 aa		4.87	□□□□□ -1.63
PCCA-205	ENST00000424527	DDR1	Q08345	913 aa		4.87	□□□□□ -1.63
PCCA-205	ENST00000424527	TEF	Q10587	303 aa		4.87	□□□□□ -1.63
PCCA-205	ENST00000424527	MTA1	Q13330	715 aa		4.87	□□□□□ -1.63
PCCA-205	ENST00000424527	PTK6	Q13882	451 aa		4.87	□□□□□ -1.63
PCCA-205	ENST00000424527	SNTB1	Q13884	538 aa	Known RBP	4.87	□□□□□ -1.63
PCCA-205	ENST00000424527	NAA25	Q14CX7	972 aa		4.87	□□□□□ -1.63
PCCA-205	ENST00000424527	RAB3GAP1	Q15042	981 aa		4.87	□□□□□ -1.63
PCCA-205	ENST00000424527	ALG11	Q2TAA5	492 aa		4.87	□□□□□ -1.63
PCCA-205	ENST00000424527	DPCR1	Q3MIW9	517 aa		4.87	□□□□□ -1.63
PCCA-205	ENST00000424527	WDR72	Q3MJ13	1102 aa		4.87	□□□□□ -1.63
PCCA-205	ENST00000424527	TMEM200B	Q69YZ2	307 aa		4.87	□□□□□ -1.63
PCCA-205	ENST00000424527	TRAT1	Q6PIZ9	186 aa		4.87	□□□□□ -1.63
PCCA-205	ENST00000424527	PAQR3	Q6TCH7	311 aa		4.87	□□□□□ -1.63
PCCA-205	ENST00000424527	DENND5B	Q6ZUT9	1274 aa		4.87	□□□□□ -1.63
PCCA-205	ENST00000424527	MIGA1	Q8NAN2	632 aa		4.87	□□□□□ -1.63
PCCA-205	ENST00000424527	FAM46D	Q8NEK8	389 aa		4.87	□□□□□ -1.63
PCCA-205	ENST00000424527	FIBIN	Q8TAL6	211 aa		4.87	□□□□□ -1.63
PCCA-205	ENST00000424527	DUSP19	Q8WTR2	217 aa		4.87	□□□□□ -1.63
PCCA-205	ENST00000424527	NKD2	Q969F2	451 aa	Predicted RBP	4.87	□□□□□ -1.63
PCCA-205	ENST00000424527	INTS12	Q96CB8	462 aa	Known RBP	4.87	□□□□□ -1.63
PCCA-205	ENST00000424527	ELP4	Q96EB1	424 aa		4.87	□□□□□ -1.63
PCCA-205	ENST00000424527	RBM18	Q96H35	190 aa	Known RBP	4.87	□□□□□ -1.63
PCCA-205	ENST00000424527	ERO1A	Q96HE7	468 aa		4.87	□□□□□ -1.63
PCCA-205	ENST00000424527	FER1L6-AS2	Q96M78	137 aa		4.87	□□□□□ -1.63
PCCA-205	ENST00000424527	WRNIP1	Q96S55	665 aa		4.87	□□□□□ -1.63
PCCA-205	ENST00000424527	ABHD1	Q96SE0	405 aa		4.87	□□□□□ -1.63
PCCA-205	ENST00000424527	TMEM209	Q96SK2	561 aa		4.87	□□□□□ -1.63
PCCA-205	ENST00000424527	FIZ1	Q96SL8	496 aa		4.87	□□□□□ -1.63
PCCA-205	ENST00000424527	FERMT1	Q9BQL6	677 aa		4.87	□□□□□ -1.63
PCCA-205	ENST00000424527	SLC25A23	Q9BV35	468 aa		4.87	□□□□□ -1.63
PCCA-205	ENST00000424527	VPS33B	Q9H267	617 aa		4.87	□□□□□ -1.63
PCCA-205	ENST00000424527	MROH8	Q9H579	483 aa		4.87	□□□□□ -1.63
PCCA-205	ENST00000424527	RMI1	Q9H9A7	625 aa		4.87	□□□□□ -1.63
PCCA-205	ENST00000424527	ABCB8	Q9NUT2	735 aa		4.87	□□□□□ -1.63
PCCA-205	ENST00000424527	ACTR3B	Q9P1U1	418 aa		4.87	□□□□□ -1.63
PCCA-205	ENST00000424527	DNMT3B	Q9UBC3	853 aa	Known RBP	4.87	□□□□□ -1.63
PCCA-205	ENST00000424527		Q9UFV3	132 aa		4.87	□□□□□ -1.63
PCCA-205	ENST00000424527	IL19	Q9UHD0	177 aa		4.87	□□□□□ -1.63
PCCA-205	ENST00000424527	OSGIN1	Q9UJX0	560 aa		4.87	□□□□□ -1.63
PCCA-205	ENST00000424527	SIT1	Q9Y3P8	196 aa		4.87	□□□□□ -1.63
PCCA-205	ENST00000424527	NPHP4	O75161	1426 aa	Predicted RBP	4.87	□□□□□ -1.63
PCCA-205	ENST00000424527	SETD5	Q9C0A6	1442 aa		4.87	□□□□□ -1.63
PCCA-205	ENST00000424527	NRXN3	Q9Y4C0	1643 aa		4.86	□□□□□ -1.63
PCCA-205	ENST00000424527	PPL	O60437	1756 aa		4.86	□□□□□ -1.63
PCCA-205	ENST00000424527	SLC38A8	A6NNN8	435 aa		4.86	□□□□□ -1.63
PCCA-205	ENST00000424527	TMEM110-MUSTN1	A8MSY1	372 aa		4.86	□□□□□ -1.63
PCCA-205	ENST00000424527		A8MZ25	164 aa		4.86	□□□□□ -1.63
PCCA-205	ENST00000424527	EIF3CL	B5ME19	914 aa	Known RBP	4.86	□□□□□ -1.63
PCCA-205	ENST00000424527	DHH	O43323	396 aa		4.86	□□□□□ -1.63
PCCA-205	ENST00000424527	SOCS5	O75159	536 aa		4.86	□□□□□ -1.63
PCCA-205	ENST00000424527	RTN2	O75298	545 aa		4.86	□□□□□ -1.63
PCCA-205	ENST00000424527	CER1	O95813	267 aa		4.86	□□□□□ -1.63
PCCA-205	ENST00000424527	OLFM2	O95897	454 aa		4.86	□□□□□ -1.63
PCCA-205	ENST00000424527	FTCD	O95954	541 aa		4.86	□□□□□ -1.63
PCCA-205	ENST00000424527	AMH	P03971	560 aa		4.86	□□□□□ -1.63
PCCA-205	ENST00000424527	SNRPA1	P09661	255 aa	Known RBP	4.86	□□□□□ -1.63
PCCA-205	ENST00000424527	MSL3P1	P0C860	447 aa		4.86	□□□□□ -1.63
PCCA-205	ENST00000424527	C6	P13671	934 aa		4.86	□□□□□ -1.63
PCCA-205	ENST00000424527	ZNF8	P17098	575 aa	Predicted RBP	4.86	□□□□□ -1.63
PCCA-205	ENST00000424527	TCEA1	P23193	301 aa	Known RBP	4.86	□□□□□ -1.63
PCCA-205	ENST00000424527	HOXA11	P31270	313 aa	Predicted RBP	4.86	□□□□□ -1.63
PCCA-205	ENST00000424527	CIITA	P33076	1130 aa		4.86	□□□□□ -1.63
PCCA-205	ENST00000424527	UFM1	P61960	85 aa		4.86	□□□□□ -1.63
PCCA-205	ENST00000424527	HTD2	P86397	168 aa		4.86	□□□□□ -1.63
PCCA-205	ENST00000424527	KLHL30	Q0D2K2	578 aa		4.86	□□□□□ -1.63

Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms