RNA–Protein interactions for RNA: ENST00000423635.5

CHCHD3-202, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

TSL 1 (best)

Gene CHCHD3, Length 1,310 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-202ENST00000423635 MAPK15Q8TD08 544 aa17.21■□□□□ 0.35
CHCHD3-202ENST00000423635 BTN2A3PQ96KV6 586 aa17.21■□□□□ 0.35
CHCHD3-202ENST00000423635 PPP1R9BQ96SB3 815 aa17.21■□□□□ 0.35
CHCHD3-202ENST00000423635 PRMT1Q99873 361 aaKnown RBP17.21■□□□□ 0.35
CHCHD3-202ENST00000423635 MIS12Q9H081 205 aa17.21■□□□□ 0.35
CHCHD3-202ENST00000423635 TDRD6O60522 2096 aaKnown RBP17.21■□□□□ 0.35
CHCHD3-202ENST00000423635 A0A1W2PQU0 124 aa17.21■□□□□ 0.34
CHCHD3-202ENST00000423635 CDRT15L2A8MXV6 281 aa17.21■□□□□ 0.34
CHCHD3-202ENST00000423635 K7ELQ4 463 aaPredicted RBP17.21■□□□□ 0.34
CHCHD3-202ENST00000423635 RNF225M0QZC1 329 aaPredicted RBP17.21■□□□□ 0.34
CHCHD3-202ENST00000423635 RIOK3O14730 519 aaKnown RBP17.21■□□□□ 0.34
CHCHD3-202ENST00000423635 CETN3O15182 167 aa17.21■□□□□ 0.34
CHCHD3-202ENST00000423635 F13A1P00488 732 aa17.21■□□□□ 0.34
CHCHD3-202ENST00000423635 APOEP02649 317 aa17.21■□□□□ 0.34
CHCHD3-202ENST00000423635 ZSCAN22P10073 491 aaPredicted RBP17.21■□□□□ 0.34
CHCHD3-202ENST00000423635 TGM2P21980 687 aa17.21■□□□□ 0.34
CHCHD3-202ENST00000423635 NUCB2P80303 420 aa17.21■□□□□ 0.34
CHCHD3-202ENST00000423635 DLG2Q15700 870 aa17.21■□□□□ 0.34
CHCHD3-202ENST00000423635 ZNF284Q2VY69 593 aa17.21■□□□□ 0.34
CHCHD3-202ENST00000423635 PIP5KL1Q5T9C9 394 aa17.21■□□□□ 0.34
CHCHD3-202ENST00000423635 FOXD4L5Q5VV16 416 aaPredicted RBP17.21■□□□□ 0.34
CHCHD3-202ENST00000423635 SYPL2Q5VXT5 272 aa17.21■□□□□ 0.34
CHCHD3-202ENST00000423635 KIAA1614Q5VZ46 1190 aa17.21■□□□□ 0.34
CHCHD3-202ENST00000423635 CXorf57Q6NSI4 855 aaKnown RBP17.21■□□□□ 0.34
CHCHD3-202ENST00000423635 TMEM270Q6UE05 265 aa17.21■□□□□ 0.34
CHCHD3-202ENST00000423635 ABI3BPQ7Z7G0 1075 aa17.21■□□□□ 0.34
CHCHD3-202ENST00000423635 TAC4Q86UU9 113 aa17.21■□□□□ 0.34
CHCHD3-202ENST00000423635 HORMAD1Q86X24 394 aa17.21■□□□□ 0.34
CHCHD3-202ENST00000423635 CHSY1Q86X52 802 aa17.21■□□□□ 0.34
CHCHD3-202ENST00000423635 DCP2Q8IU60 420 aaKnown RBP17.21■□□□□ 0.34
CHCHD3-202ENST00000423635 OR13H1Q8NG92 308 aa17.21■□□□□ 0.34
CHCHD3-202ENST00000423635 IFI44Q8TCB0 444 aa17.21■□□□□ 0.34
CHCHD3-202ENST00000423635 FOXD4L4Q8WXT5 416 aaPredicted RBP17.21■□□□□ 0.34
CHCHD3-202ENST00000423635 CALN1Q9BXU9 219 aa17.21■□□□□ 0.34
CHCHD3-202ENST00000423635 CAAP1Q9H8G2 361 aa17.21■□□□□ 0.34
CHCHD3-202ENST00000423635 F5H5T6 163 aa17.2■□□□□ 0.34
CHCHD3-202ENST00000423635 M0QYV0 167 aa17.2■□□□□ 0.34
CHCHD3-202ENST00000423635 SART1O43290 800 aaKnown RBP17.2■□□□□ 0.34
CHCHD3-202ENST00000423635 IGLV3-25P01717 112 aa17.2■□□□□ 0.34
CHCHD3-202ENST00000423635 PRR29P0C7W0 189 aa17.2■□□□□ 0.34
CHCHD3-202ENST00000423635 PRLRP16471 622 aa17.2■□□□□ 0.34
CHCHD3-202ENST00000423635 ZNF18P17022 549 aa17.2■□□□□ 0.34
CHCHD3-202ENST00000423635 HNRNPA2B1P22626 353 aaKnown RBP17.2■□□□□ 0.34
CHCHD3-202ENST00000423635 AKT2P31751 481 aa17.2■□□□□ 0.34
CHCHD3-202ENST00000423635 HNRNPKP61978 463 aaKnown RBP eCLIP17.2■□□□□ 0.346e-7■■□□□ 13
CHCHD3-202ENST00000423635 CCDC15Q0P6D6 951 aa17.2■□□□□ 0.34
CHCHD3-202ENST00000423635 ARL13BQ3SXY8 428 aa17.2■□□□□ 0.34
CHCHD3-202ENST00000423635 ACCSLQ4AC99 568 aa17.2■□□□□ 0.34
CHCHD3-202ENST00000423635 ZC3H12AQ5D1E8 599 aaKnown RBP17.2■□□□□ 0.34
CHCHD3-202ENST00000423635 C3orf38Q5JPI3 329 aa17.2■□□□□ 0.34
CHCHD3-202ENST00000423635 TTC39BQ5VTQ0 682 aaPredicted RBP17.2■□□□□ 0.34
CHCHD3-202ENST00000423635 CCDC81Q6ZN84 652 aa17.2■□□□□ 0.34
CHCHD3-202ENST00000423635 SLC22A18ASQ8N1D0 253 aa17.2■□□□□ 0.34
CHCHD3-202ENST00000423635 KLK6Q92876 244 aa17.2■□□□□ 0.34
CHCHD3-202ENST00000423635 NOX5Q96PH1 765 aa17.2■□□□□ 0.34
CHCHD3-202ENST00000423635 GPR27Q9NS67 375 aa17.2■□□□□ 0.34
CHCHD3-202ENST00000423635 SLTMQ9NWH9 1034 aaKnown RBP eCLIP17.2■□□□□ 0.34
CHCHD3-202ENST00000423635 IL17BQ9UHF5 180 aa17.2■□□□□ 0.34
CHCHD3-202ENST00000423635 SLC25A13Q9UJS0 675 aa17.2■□□□□ 0.34
CHCHD3-202ENST00000423635 ENTPD2Q9Y5L3 495 aa17.2■□□□□ 0.34
CHCHD3-202ENST00000423635 HS3ST3A1Q9Y663 406 aa17.2■□□□□ 0.34
CHCHD3-202ENST00000423635 TCAF2A6NFQ2 919 aa17.19■□□□□ 0.34
CHCHD3-202ENST00000423635 KCNU1A8MYU2 1149 aa17.19■□□□□ 0.34
CHCHD3-202ENST00000423635 MLLT3P42568 568 aaPredicted RBP17.19■□□□□ 0.34
CHCHD3-202ENST00000423635 GPD2P43304 727 aa17.19■□□□□ 0.34
CHCHD3-202ENST00000423635 NUMBP49757 651 aa17.19■□□□□ 0.34
CHCHD3-202ENST00000423635 SRSF1Q07955 248 aaKnown RBP eCLIP17.19■□□□□ 0.34
CHCHD3-202ENST00000423635 TCERG1LQ5VWI1 586 aa17.19■□□□□ 0.34
CHCHD3-202ENST00000423635 ZCCHC8Q6NZY4 707 aaKnown RBP17.19■□□□□ 0.34
CHCHD3-202ENST00000423635 XKR5Q6UX68 686 aa17.19■□□□□ 0.34
CHCHD3-202ENST00000423635 GCNT7Q6ZNI0 430 aa17.19■□□□□ 0.34
CHCHD3-202ENST00000423635 ATP6V0D2Q8N8Y2 350 aa17.19■□□□□ 0.34
CHCHD3-202ENST00000423635 TPCN2Q8NHX9 752 aa17.19■□□□□ 0.34
CHCHD3-202ENST00000423635 FAM149B1Q96BN6 582 aa17.19■□□□□ 0.34
CHCHD3-202ENST00000423635 ATXN7L3BQ96GX2 97 aa17.19■□□□□ 0.34
CHCHD3-202ENST00000423635 MYOCQ99972 504 aa17.19■□□□□ 0.34
CHCHD3-202ENST00000423635 FEM1AQ9BSK4 669 aa17.19■□□□□ 0.34
CHCHD3-202ENST00000423635 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP17.19■□□□□ 0.34
CHCHD3-202ENST00000423635 TRIM62Q9BVG3 475 aa17.19■□□□□ 0.34
CHCHD3-202ENST00000423635 NCKIPSDQ9NZQ3 722 aa17.19■□□□□ 0.34
CHCHD3-202ENST00000423635 OR51B4Q9Y5P0 310 aa17.19■□□□□ 0.34
CHCHD3-202ENST00000423635 CSNK1G3Q9Y6M4 447 aa17.19■□□□□ 0.34
CHCHD3-202ENST00000423635 EME2A4GXA9 379 aaPredicted RBP17.18■□□□□ 0.34
CHCHD3-202ENST00000423635 TRUB2O95900 331 aaKnown RBP17.18■□□□□ 0.34
CHCHD3-202ENST00000423635 CSF2P04141 144 aa17.18■□□□□ 0.34
CHCHD3-202ENST00000423635 CTSLP07711 333 aa17.18■□□□□ 0.34
CHCHD3-202ENST00000423635 BRD2P25440 801 aaKnown RBP17.18■□□□□ 0.34
CHCHD3-202ENST00000423635 CLDN2P57739 230 aa17.18■□□□□ 0.34
CHCHD3-202ENST00000423635 DNM1Q05193 864 aaKnown RBP17.18■□□□□ 0.34
CHCHD3-202ENST00000423635 LRMPQ12912 555 aa17.18■□□□□ 0.34
CHCHD3-202ENST00000423635 CLN3Q13286 438 aa17.18■□□□□ 0.34
CHCHD3-202ENST00000423635 ZNF542PQ5EBM4 170 aa17.18■□□□□ 0.34
CHCHD3-202ENST00000423635 DCAF17Q5H9S7 520 aaPredicted RBP17.18■□□□□ 0.34
CHCHD3-202ENST00000423635 Q6ZSR6 202 aa17.18■□□□□ 0.34
CHCHD3-202ENST00000423635 Q6ZVU0 165 aa17.18■□□□□ 0.34
CHCHD3-202ENST00000423635 CLEC14AQ86T13 490 aa17.18■□□□□ 0.34
CHCHD3-202ENST00000423635 COL27A1Q8IZC6 1860 aaPredicted RBP17.18■□□□□ 0.34
CHCHD3-202ENST00000423635 SH2D3CQ8N5H7 860 aa17.18■□□□□ 0.34
CHCHD3-202ENST00000423635 EXD3Q8N9H8 876 aa17.18■□□□□ 0.34
CHCHD3-202ENST00000423635 TMIEQ8NEW7 156 aa17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 72.1 ms