RNA–Protein interactions for RNA: ENST00000423368.6

CNOT4-205, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CNOT4, Length 3,297 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-205ENST00000423368 C16orf46Q6P387 395 aa6.98□□□□□ -1.29
CNOT4-205ENST00000423368 POTEBQ6S5H4 581 aa6.98□□□□□ -1.29
CNOT4-205ENST00000423368 CRTC3Q6UUV7 619 aa6.98□□□□□ -1.29
CNOT4-205ENST00000423368 FAM83FQ8NEG4 500 aaPredicted RBP6.98□□□□□ -1.29
CNOT4-205ENST00000423368 OR6P1Q8NGX9 317 aa6.98□□□□□ -1.29
CNOT4-205ENST00000423368 SLC20A1Q8WUM9 679 aa6.98□□□□□ -1.29
CNOT4-205ENST00000423368 IPCEF1Q8WWN9 437 aaPredicted RBP6.98□□□□□ -1.29
CNOT4-205ENST00000423368 USP7Q93009 1102 aa6.98□□□□□ -1.29
CNOT4-205ENST00000423368 ACSF2Q96CM8 615 aaPredicted RBP6.98□□□□□ -1.29
CNOT4-205ENST00000423368 PAFAH2Q99487 392 aa6.98□□□□□ -1.29
CNOT4-205ENST00000423368 CLSTN3Q9BQT9 956 aa6.98□□□□□ -1.29
CNOT4-205ENST00000423368 IFT22Q9H7X7 185 aa6.98□□□□□ -1.29
CNOT4-205ENST00000423368 EPB41L4AQ9HCS5 686 aaPredicted RBP6.98□□□□□ -1.29
CNOT4-205ENST00000423368 DDX4Q9NQI0 724 aaKnown RBP6.98□□□□□ -1.29
CNOT4-205ENST00000423368 GCNT4Q9P109 453 aa6.98□□□□□ -1.29
CNOT4-205ENST00000423368 PSAT1Q9Y617 370 aa6.98□□□□□ -1.29
CNOT4-205ENST00000423368 A2ML1A8K2U0 1454 aa6.98□□□□□ -1.29
CNOT4-205ENST00000423368 KRT18P05783 430 aaKnown RBP6.97□□□□□ -1.29
CNOT4-205ENST00000423368 POLR2IP36954 125 aaKnown RBP6.97□□□□□ -1.29
CNOT4-205ENST00000423368 CLK1P49759 484 aaKnown RBP6.97□□□□□ -1.29
CNOT4-205ENST00000423368 KCNC4Q03721 635 aa6.97□□□□□ -1.29
CNOT4-205ENST00000423368 ABRQ12979 859 aa6.97□□□□□ -1.29
CNOT4-205ENST00000423368 GPS1Q13098 491 aa6.97□□□□□ -1.29
CNOT4-205ENST00000423368 COLEC12Q5KU26 742 aa6.97□□□□□ -1.29
CNOT4-205ENST00000423368 NXNL2Q5VZ03 156 aa6.97□□□□□ -1.29
CNOT4-205ENST00000423368 CES4AQ5XG92 561 aa6.97□□□□□ -1.29
CNOT4-205ENST00000423368 STYK1Q6J9G0 422 aa6.97□□□□□ -1.29
CNOT4-205ENST00000423368 C11orf63Q6NUN7 778 aa6.97□□□□□ -1.29
CNOT4-205ENST00000423368 USP17L6PQ6QN14 398 aa6.97□□□□□ -1.29
CNOT4-205ENST00000423368 CES3Q6UWW8 571 aa6.97□□□□□ -1.29
CNOT4-205ENST00000423368 ZNF438Q7Z4V0 828 aa6.97□□□□□ -1.29
CNOT4-205ENST00000423368 TRIM48Q8IWZ4 208 aa6.97□□□□□ -1.29
CNOT4-205ENST00000423368 LSMEM2Q8N112 164 aa6.97□□□□□ -1.29
CNOT4-205ENST00000423368 AGBL3Q8NEM8 1001 aa6.97□□□□□ -1.29
CNOT4-205ENST00000423368 SLC30A5Q8TAD4 765 aa6.97□□□□□ -1.29
CNOT4-205ENST00000423368 FANK1Q8TC84 345 aa6.97□□□□□ -1.29
CNOT4-205ENST00000423368 UBASH3BQ8TF42 649 aa6.97□□□□□ -1.29
CNOT4-205ENST00000423368 CA5BP1Q8WTZ4 195 aa6.97□□□□□ -1.29
CNOT4-205ENST00000423368 TFB1MQ8WVM0 346 aaKnown RBP6.97□□□□□ -1.29
CNOT4-205ENST00000423368 TRIM63Q969Q1 353 aa6.97□□□□□ -1.29
CNOT4-205ENST00000423368 TOE1Q96GM8 510 aaKnown RBP6.97□□□□□ -1.29
CNOT4-205ENST00000423368 NACC1Q96RE7 527 aa6.97□□□□□ -1.29
CNOT4-205ENST00000423368 ZNF347Q96SE7 839 aa6.97□□□□□ -1.29
CNOT4-205ENST00000423368 CSF3RQ99062 836 aa6.97□□□□□ -1.29
CNOT4-205ENST00000423368 CCDC106Q9BWC9 280 aa6.97□□□□□ -1.29
CNOT4-205ENST00000423368 C6orf62Q9GZU0 229 aaPredicted RBP6.97□□□□□ -1.29
CNOT4-205ENST00000423368 NYXQ9GZU5 481 aa6.97□□□□□ -1.29
CNOT4-205ENST00000423368 PARVAQ9NVD7 372 aa6.97□□□□□ -1.29
CNOT4-205ENST00000423368 PCYOX1Q9UHG3 505 aa6.97□□□□□ -1.29
CNOT4-205ENST00000423368 RAD54BQ9Y620 910 aa6.97□□□□□ -1.29
CNOT4-205ENST00000423368 FAM205AQ6ZU69 1335 aa6.97□□□□□ -1.29
CNOT4-205ENST00000423368 SYNGAP1Q96PV0 1343 aa6.97□□□□□ -1.29
CNOT4-205ENST00000423368 VWDEQ8N2E2 1590 aa6.97□□□□□ -1.29
CNOT4-205ENST00000423368 E5RI56 91 aa6.97□□□□□ -1.29
CNOT4-205ENST00000423368 SMLR1H3BR10 107 aa6.97□□□□□ -1.29
CNOT4-205ENST00000423368 CES2O00748 559 aa6.97□□□□□ -1.29
CNOT4-205ENST00000423368 RGS13O14921 159 aa6.97□□□□□ -1.29
CNOT4-205ENST00000423368 TM9SF1O15321 606 aa6.97□□□□□ -1.29
CNOT4-205ENST00000423368 SSX5O60225 188 aa6.97□□□□□ -1.29
CNOT4-205ENST00000423368 BEST1O76090 585 aa6.97□□□□□ -1.29
CNOT4-205ENST00000423368 MTA2O94776 668 aa6.97□□□□□ -1.29
CNOT4-205ENST00000423368 PRKD3O94806 890 aa6.97□□□□□ -1.29
CNOT4-205ENST00000423368 CYP2D6P10635 497 aa6.97□□□□□ -1.29
CNOT4-205ENST00000423368 PIM1P11309 404 aaPredicted RBP6.97□□□□□ -1.29
CNOT4-205ENST00000423368 BMP4P12644 408 aa6.97□□□□□ -1.29
CNOT4-205ENST00000423368 ATP2B4P23634 1241 aa6.97□□□□□ -1.29
CNOT4-205ENST00000423368 NR2F2P24468 414 aa6.97□□□□□ -1.29
CNOT4-205ENST00000423368 CCND2P30279 289 aa6.97□□□□□ -1.29
CNOT4-205ENST00000423368 GNL1P36915 607 aaPredicted RBP6.97□□□□□ -1.29
CNOT4-205ENST00000423368 BLVRAP53004 296 aa6.97□□□□□ -1.29
CNOT4-205ENST00000423368 XIAPP98170 497 aa6.97□□□□□ -1.29
CNOT4-205ENST00000423368 TOP3AQ13472 1001 aaPredicted RBP6.97□□□□□ -1.29
CNOT4-205ENST00000423368 CDK10Q15131 360 aa6.97□□□□□ -1.29
CNOT4-205ENST00000423368 FSCN1Q16658 493 aaKnown RBP6.97□□□□□ -1.29
CNOT4-205ENST00000423368 CENPPQ6IPU0 288 aa6.97□□□□□ -1.29
CNOT4-205ENST00000423368 INTS5Q6P9B9 1019 aaKnown RBP6.97□□□□□ -1.29
CNOT4-205ENST00000423368 LRRC55Q6ZSA7 311 aa6.97□□□□□ -1.29
CNOT4-205ENST00000423368 COPS6Q7L5N1 327 aa6.97□□□□□ -1.29
CNOT4-205ENST00000423368 KCNK18Q7Z418 384 aa6.97□□□□□ -1.29
CNOT4-205ENST00000423368 CHERPQ8IWX8 916 aaKnown RBP6.97□□□□□ -1.29
CNOT4-205ENST00000423368 PCDH20Q8N6Y1 951 aaKnown RBP6.97□□□□□ -1.29
CNOT4-205ENST00000423368 LRRC59Q96AG4 307 aaKnown RBP6.97□□□□□ -1.29
CNOT4-205ENST00000423368 SGF29Q96ES7 293 aa6.97□□□□□ -1.29
CNOT4-205ENST00000423368 SERAC1Q96JX3 654 aa6.97□□□□□ -1.29
CNOT4-205ENST00000423368 C12orf57Q99622 126 aa6.97□□□□□ -1.29
CNOT4-205ENST00000423368 OR2B2Q9GZK3 357 aa6.97□□□□□ -1.29
CNOT4-205ENST00000423368 C2orf40Q9H1Z8 148 aa6.97□□□□□ -1.29
CNOT4-205ENST00000423368 C14orf119Q9NWQ9 140 aa6.97□□□□□ -1.29
CNOT4-205ENST00000423368 PSMC3IPQ9P2W1 217 aaPredicted RBP6.97□□□□□ -1.29
CNOT4-205ENST00000423368 OGDHLQ9ULD0 1010 aa6.97□□□□□ -1.29
CNOT4-205ENST00000423368 RGSL1A5PLK6 1076 aa6.96□□□□□ -1.29
CNOT4-205ENST00000423368 POTEMA6NI47 508 aa6.96□□□□□ -1.29
CNOT4-205ENST00000423368 SAGE2PA6NJ88 616 aa6.96□□□□□ -1.29
CNOT4-205ENST00000423368 OR5K4A6NMS3 321 aa6.96□□□□□ -1.29
CNOT4-205ENST00000423368 LINC00587B1AMM8 73 aa6.96□□□□□ -1.29
CNOT4-205ENST00000423368 SNAP23O00161 211 aa6.96□□□□□ -1.29
CNOT4-205ENST00000423368 COPEO14579 308 aa6.96□□□□□ -1.29
CNOT4-205ENST00000423368 SLC9A3R1O14745 358 aaPredicted RBP6.96□□□□□ -1.29
CNOT4-205ENST00000423368 CYP7B1O75881 506 aa6.96□□□□□ -1.29
CNOT4-205ENST00000423368 FAM86B2P0C5J1 330 aa6.96□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms