RNA–Protein interactions for RNA: ENST00000421756.5

MCF2L-213, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best) BASIC

Gene MCF2L, Length 3,560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-213ENST00000421756 UPF1Q92900 1129 aaKnown RBP eCLIP13.61□□□□□ -0.23
MCF2L-213ENST00000421756 HCSTQ9UBK5 93 aa13.61□□□□□ -0.23
MCF2L-213ENST00000421756 SLC7A8Q9UHI5 535 aa13.61□□□□□ -0.23
MCF2L-213ENST00000421756 PADI3Q9ULW8 664 aa13.61□□□□□ -0.23
MCF2L-213ENST00000421756 A0A0U1RQS6 177 aa13.61□□□□□ -0.23
MCF2L-213ENST00000421756 ATP6AP2A0A1C7CYW4 349 aa13.61□□□□□ -0.23
MCF2L-213ENST00000421756 OR51F1A6NGY5 319 aa13.61□□□□□ -0.23
MCF2L-213ENST00000421756 ATP6AP2O75787 350 aa13.61□□□□□ -0.23
MCF2L-213ENST00000421756 ENO3P13929 434 aaPredicted RBP13.61□□□□□ -0.23
MCF2L-213ENST00000421756 GEN1Q17RS7 908 aa13.61□□□□□ -0.23
MCF2L-213ENST00000421756 TSNAXIP1Q2TAA8 658 aa13.61□□□□□ -0.23
MCF2L-213ENST00000421756 PDPK2PQ6A1A2 396 aa13.61□□□□□ -0.23
MCF2L-213ENST00000421756 CHSY1Q86X52 802 aa13.61□□□□□ -0.23
MCF2L-213ENST00000421756 TTC9BQ8N6N2 239 aa13.61□□□□□ -0.23
MCF2L-213ENST00000421756 OR10T2Q8NGX3 314 aa13.61□□□□□ -0.23
MCF2L-213ENST00000421756 CENPIQ92674 756 aaPredicted RBP13.61□□□□□ -0.23
MCF2L-213ENST00000421756 VPS39Q96JC1 886 aa13.61□□□□□ -0.23
MCF2L-213ENST00000421756 ELMO2Q96JJ3 720 aa13.61□□□□□ -0.23
MCF2L-213ENST00000421756 TSNARE1Q96NA8 513 aa13.61□□□□□ -0.23
MCF2L-213ENST00000421756 COG4Q9H9E3 785 aa13.61□□□□□ -0.23
MCF2L-213ENST00000421756 WDR6Q9NNW5 1121 aaKnown RBP13.61□□□□□ -0.23
MCF2L-213ENST00000421756 COPG2Q9UBF2 871 aa13.61□□□□□ -0.23
MCF2L-213ENST00000421756 PPM1HQ9ULR3 514 aa13.61□□□□□ -0.23
MCF2L-213ENST00000421756 SMAPO00193 183 aa13.6□□□□□ -0.23
MCF2L-213ENST00000421756 DAB1O75553 588 aa13.6□□□□□ -0.23
MCF2L-213ENST00000421756 CHRNA1P02708 482 aa13.6□□□□□ -0.23
MCF2L-213ENST00000421756 GARSP41250 739 aaKnown RBP13.6□□□□□ -0.23
MCF2L-213ENST00000421756 GSCP56915 257 aaPredicted RBP13.6□□□□□ -0.23
MCF2L-213ENST00000421756 ITGA7Q13683 1181 aa13.6□□□□□ -0.23
MCF2L-213ENST00000421756 ATPAF2Q8N5M1 289 aa13.6□□□□□ -0.23
MCF2L-213ENST00000421756 CNTD1Q8N815 330 aa13.6□□□□□ -0.23
MCF2L-213ENST00000421756 ATAD1Q8NBU5 361 aa13.6□□□□□ -0.23
MCF2L-213ENST00000421756 PPFIBP2Q8ND30 876 aa13.6□□□□□ -0.23
MCF2L-213ENST00000421756 URGCPQ8TCY9 931 aa13.6□□□□□ -0.23
MCF2L-213ENST00000421756 DQX1Q8TE96 717 aaKnown RBP13.6□□□□□ -0.23
MCF2L-213ENST00000421756 ZC3H15Q8WU90 426 aaKnown RBP13.6□□□□□ -0.23
MCF2L-213ENST00000421756 LRRC40Q9H9A6 602 aa13.6□□□□□ -0.23
MCF2L-213ENST00000421756 ACTL7AQ9Y615 435 aa13.6□□□□□ -0.23
MCF2L-213ENST00000421756 USP3Q9Y6I4 520 aa13.6□□□□□ -0.23
MCF2L-213ENST00000421756 TLL2Q9Y6L7 1015 aa13.6□□□□□ -0.23
MCF2L-213ENST00000421756 STX16-NPEPL1H3BU86 382 aa13.6□□□□□ -0.23
MCF2L-213ENST00000421756 SIN3BO75182 1162 aa13.6□□□□□ -0.23
MCF2L-213ENST00000421756 GLRA3O75311 464 aa13.6□□□□□ -0.23
MCF2L-213ENST00000421756 TPSB2P20231 275 aa13.6□□□□□ -0.23
MCF2L-213ENST00000421756 SKIV2L2P42285 1042 aaKnown RBP13.6□□□□□ -0.23
MCF2L-213ENST00000421756 SERPINB9P50453 376 aa13.6□□□□□ -0.23
MCF2L-213ENST00000421756 EFEMP1Q12805 493 aa13.6□□□□□ -0.23
MCF2L-213ENST00000421756 CSHL1Q14406 222 aa13.6□□□□□ -0.23
MCF2L-213ENST00000421756 TPSAB1Q15661 275 aa13.6□□□□□ -0.23
MCF2L-213ENST00000421756 MBLAC2Q68D91 279 aa13.6□□□□□ -0.23
MCF2L-213ENST00000421756 TLDC1Q6P9B6 456 aa13.6□□□□□ -0.23
MCF2L-213ENST00000421756 OLFM3Q96PB7 478 aa13.6□□□□□ -0.23
MCF2L-213ENST00000421756 DCLRE1BQ9H816 532 aa13.6□□□□□ -0.23
MCF2L-213ENST00000421756 NT5MQ9NPB1 228 aa13.6□□□□□ -0.23
MCF2L-213ENST00000421756 SIRPGQ9P1W8 387 aa13.6□□□□□ -0.23
MCF2L-213ENST00000421756 STOML1Q9UBI4 398 aa13.6□□□□□ -0.23
MCF2L-213ENST00000421756 TAGLN3Q9UI15 199 aa13.6□□□□□ -0.23
MCF2L-213ENST00000421756 COL1A2P08123 1366 aa13.6□□□□□ -0.23
MCF2L-213ENST00000421756 JUNP05412 331 aaKnown RBP13.6□□□□□ -0.23
MCF2L-213ENST00000421756 SPRP35270 261 aaPredicted RBP13.6□□□□□ -0.23
MCF2L-213ENST00000421756 ZNF470Q6ECI4 717 aa13.6□□□□□ -0.23
MCF2L-213ENST00000421756 OVOS1Q6IE37 1185 aa13.6□□□□□ -0.23
MCF2L-213ENST00000421756 MAVSQ7Z434 540 aa13.6□□□□□ -0.23
MCF2L-213ENST00000421756 C14orf80Q86SX3 495 aa13.6□□□□□ -0.23
MCF2L-213ENST00000421756 TMA16Q96EY4 203 aaKnown RBP13.6□□□□□ -0.23
MCF2L-213ENST00000421756 FCRL2Q96LA5 508 aaPredicted RBP13.6□□□□□ -0.23
MCF2L-213ENST00000421756 SUDS3Q9H7L9 328 aaPredicted RBP13.6□□□□□ -0.23
MCF2L-213ENST00000421756 KCNK4Q9NYG8 393 aa13.6□□□□□ -0.23
MCF2L-213ENST00000421756 MORF4L1Q9UBU8 362 aa13.6□□□□□ -0.23
MCF2L-213ENST00000421756 GABRQQ9UN88 632 aa13.6□□□□□ -0.23
MCF2L-213ENST00000421756 CRYL1Q9Y2S2 319 aa13.6□□□□□ -0.23
MCF2L-213ENST00000421756 MX2P20592 715 aa13.59□□□□□ -0.23
MCF2L-213ENST00000421756 ARL1P40616 181 aaPredicted RBP13.59□□□□□ -0.23
MCF2L-213ENST00000421756 SLC18A1P54219 525 aa13.59□□□□□ -0.23
MCF2L-213ENST00000421756 MRPS6P82932 125 aaKnown RBP13.59□□□□□ -0.23
MCF2L-213ENST00000421756 PURAQ00577 322 aaKnown RBP13.59□□□□□ -0.23
MCF2L-213ENST00000421756 TEX44Q53QW1 395 aa13.59□□□□□ -0.23
MCF2L-213ENST00000421756 RABGAP1LQ5R372 815 aa13.59□□□□□ -0.23
MCF2L-213ENST00000421756 IZUMO2Q6UXV1 221 aa13.59□□□□□ -0.23
MCF2L-213ENST00000421756 LRRC74BQ6ZQY2 392 aa13.59□□□□□ -0.23
MCF2L-213ENST00000421756 EP400NLQ6ZTU2 488 aa13.59□□□□□ -0.23
MCF2L-213ENST00000421756 PDZD4Q76G19 769 aaPredicted RBP13.59□□□□□ -0.23
MCF2L-213ENST00000421756 TRIM42Q8IWZ5 723 aa13.59□□□□□ -0.23
MCF2L-213ENST00000421756 KCNN1Q92952 543 aa13.59□□□□□ -0.23
MCF2L-213ENST00000421756 MIEF2Q96C03 454 aa13.59□□□□□ -0.23
MCF2L-213ENST00000421756 EXOC2Q96KP1 924 aa13.59□□□□□ -0.23
MCF2L-213ENST00000421756 PANX3Q96QZ0 392 aa13.59□□□□□ -0.23
MCF2L-213ENST00000421756 SAR1AQ9NR31 198 aa13.59□□□□□ -0.23
MCF2L-213ENST00000421756 PAGE1O75459 146 aa13.59□□□□□ -0.23
MCF2L-213ENST00000421756 PIGNO95427 931 aa13.59□□□□□ -0.23
MCF2L-213ENST00000421756 IDH3AP50213 366 aa13.59□□□□□ -0.23
MCF2L-213ENST00000421756 NUDT2P50583 147 aa13.59□□□□□ -0.23
MCF2L-213ENST00000421756 SLC12A2P55011 1212 aa13.59□□□□□ -0.23
MCF2L-213ENST00000421756 GRAMD1BQ3KR37 738 aa13.59□□□□□ -0.23
MCF2L-213ENST00000421756 ZNF789Q5FWF6 425 aa13.59□□□□□ -0.23
MCF2L-213ENST00000421756 CAPRIN2Q6IMN6 1127 aaKnown RBP13.59□□□□□ -0.23
MCF2L-213ENST00000421756 TDRD5Q8NAT2 981 aaKnown RBP13.59□□□□□ -0.23
MCF2L-213ENST00000421756 ZSCAN18Q8TBC5 510 aaPredicted RBP13.59□□□□□ -0.23
MCF2L-213ENST00000421756 CASP10Q92851 521 aa13.59□□□□□ -0.23
MCF2L-213ENST00000421756 NXNL1Q96CM4 212 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms