RNA–Protein interactions for RNA: ENST00000421085.6

CLCN4-203, Transcript of chloride voltage-gated channel 4, humanhuman

TSL 5 BASIC

Gene CLCN4, Length 6,534 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4-203ENST00000421085 KBTBD8Q8NFY9 601 aa12.54□□□□□ -0.4
CLCN4-203ENST00000421085 MAGEC3Q8TD91 643 aa12.54□□□□□ -0.4
CLCN4-203ENST00000421085 AGO4Q9HCK5 861 aaKnown RBP12.54□□□□□ -0.4
CLCN4-203ENST00000421085 DKK3Q9UBP4 350 aa12.54□□□□□ -0.4
CLCN4-203ENST00000421085 C3orf18Q9UK00 162 aa12.54□□□□□ -0.4
CLCN4-203ENST00000421085 BARX2Q9UMQ3 279 aaPredicted RBP12.54□□□□□ -0.4
CLCN4-203ENST00000421085 COG5Q9UP83 839 aa12.54□□□□□ -0.4
CLCN4-203ENST00000421085 CRYL1Q9Y2S2 319 aa12.54□□□□□ -0.4
CLCN4-203ENST00000421085 EPHB6O15197 1021 aa12.54□□□□□ -0.4
CLCN4-203ENST00000421085 SSNA1O43805 119 aa12.54□□□□□ -0.4
CLCN4-203ENST00000421085 DRG2P55039 364 aaKnown RBP12.54□□□□□ -0.4
CLCN4-203ENST00000421085 AMPD2Q01433 879 aa12.54□□□□□ -0.4
CLCN4-203ENST00000421085 PRKCQQ04759 706 aa12.54□□□□□ -0.4
CLCN4-203ENST00000421085 TRAP1Q12931 704 aaKnown RBP12.54□□□□□ -0.4
CLCN4-203ENST00000421085 VPS72Q15906 364 aa12.54□□□□□ -0.4
CLCN4-203ENST00000421085 EDEM1Q92611 657 aa12.54□□□□□ -0.4
CLCN4-203ENST00000421085 TMEM39BQ9GZU3 492 aa12.54□□□□□ -0.4
CLCN4-203ENST00000421085 TIMMDC1Q9NPL8 285 aa12.54□□□□□ -0.4
CLCN4-203ENST00000421085 BLOC1S4Q9NUP1 217 aa12.54□□□□□ -0.4
CLCN4-203ENST00000421085 SCAF8Q9UPN6 1271 aaKnown RBP12.54□□□□□ -0.4
CLCN4-203ENST00000421085 RRN3P2A6NIE6 340 aa12.53□□□□□ -0.4
CLCN4-203ENST00000421085 EDF1O60869 148 aaKnown RBP12.53□□□□□ -0.4
CLCN4-203ENST00000421085 B3GAT3O94766 335 aa12.53□□□□□ -0.4
CLCN4-203ENST00000421085 VTNP04004 478 aa12.53□□□□□ -0.4
CLCN4-203ENST00000421085 PTSQ03393 145 aa12.53□□□□□ -0.4
CLCN4-203ENST00000421085 STARD3Q14849 445 aa12.53□□□□□ -0.4
CLCN4-203ENST00000421085 ZNF544Q6NX49 715 aa12.53□□□□□ -0.4
CLCN4-203ENST00000421085 KAZALD1Q96I82 304 aa12.53□□□□□ -0.4
CLCN4-203ENST00000421085 LRRC19Q9H756 370 aa12.53□□□□□ -0.4
CLCN4-203ENST00000421085 A0A087WZ62 844 aa12.53□□□□□ -0.4
CLCN4-203ENST00000421085 TMCC2O75069 709 aa12.53□□□□□ -0.4
CLCN4-203ENST00000421085 PRKCIP41743 596 aa12.53□□□□□ -0.4
CLCN4-203ENST00000421085 LNX1Q8TBB1 728 aaPredicted RBP12.53□□□□□ -0.4
CLCN4-203ENST00000421085 TINF2Q9BSI4 451 aa12.53□□□□□ -0.4
CLCN4-203ENST00000421085 WDR12Q9GZL7 423 aaKnown RBP12.53□□□□□ -0.4
CLCN4-203ENST00000421085 ALG9Q9H6U8 611 aa12.53□□□□□ -0.4
CLCN4-203ENST00000421085 TOR4AQ9NXH8 423 aa12.53□□□□□ -0.4
CLCN4-203ENST00000421085 SPACA6W5XKT8 324 aa12.53□□□□□ -0.4
CLCN4-203ENST00000421085 SALL1Q9NSC2 1324 aa12.53□□□□□ -0.4
CLCN4-203ENST00000421085 GSC2O15499 205 aa12.53□□□□□ -0.4
CLCN4-203ENST00000421085 EPN2O95208 641 aa12.53□□□□□ -0.4
CLCN4-203ENST00000421085 ZBTB11O95625 1053 aaPredicted RBP12.53□□□□□ -0.4
CLCN4-203ENST00000421085 MYL4P12829 197 aa12.53□□□□□ -0.4
CLCN4-203ENST00000421085 CDC42P60953 191 aa12.53□□□□□ -0.4
CLCN4-203ENST00000421085 RHOAP61586 193 aa12.53□□□□□ -0.4
CLCN4-203ENST00000421085 NDUFAF6Q330K2 333 aa12.53□□□□□ -0.4
CLCN4-203ENST00000421085 ARMC6Q6NXE6 501 aa12.53□□□□□ -0.4
CLCN4-203ENST00000421085 MYDGFQ969H8 173 aa12.53□□□□□ -0.4
CLCN4-203ENST00000421085 MECRQ9BV79 373 aa12.53□□□□□ -0.4
CLCN4-203ENST00000421085 UMODL1Q5DID0 1318 aa12.53□□□□□ -0.4
CLCN4-203ENST00000421085 A0A1W2PPM1 405 aa12.53□□□□□ -0.4
CLCN4-203ENST00000421085 BTNL10A8MVZ5 291 aa12.53□□□□□ -0.4
CLCN4-203ENST00000421085 CBX4O00257 560 aa12.53□□□□□ -0.4
CLCN4-203ENST00000421085 BMP6P22004 513 aa12.53□□□□□ -0.4
CLCN4-203ENST00000421085 FMO4P31512 558 aa12.53□□□□□ -0.4
CLCN4-203ENST00000421085 MARCKSL1P49006 195 aa12.53□□□□□ -0.4
CLCN4-203ENST00000421085 PUDPQ08623 228 aa12.53□□□□□ -0.4
CLCN4-203ENST00000421085 RIPK1Q13546 671 aa12.53□□□□□ -0.4
CLCN4-203ENST00000421085 PRR5LQ6MZQ0 368 aa12.53□□□□□ -0.4
CLCN4-203ENST00000421085 RIOX1Q9H6W3 641 aa12.53□□□□□ -0.4
CLCN4-203ENST00000421085 IKZF3Q9UKT9 509 aa12.53□□□□□ -0.4
CLCN4-203ENST00000421085 ING4Q9UNL4 249 aa12.53□□□□□ -0.4
CLCN4-203ENST00000421085 GRK4P32298 578 aa12.53□□□□□ -0.4
CLCN4-203ENST00000421085 SLC12A3P55017 1021 aa12.53□□□□□ -0.4
CLCN4-203ENST00000421085 ADIGQ0VDE8 80 aa12.53□□□□□ -0.4
CLCN4-203ENST00000421085 PFKFB4Q16877 469 aa12.53□□□□□ -0.4
CLCN4-203ENST00000421085 LACTB2Q53H82 288 aaPredicted RBP12.53□□□□□ -0.4
CLCN4-203ENST00000421085 ZCCHC8Q6NZY4 707 aaKnown RBP12.53□□□□□ -0.4
CLCN4-203ENST00000421085 LRRC49Q8IUZ0 686 aa12.53□□□□□ -0.4
CLCN4-203ENST00000421085 EZH1Q92800 747 aaPredicted RBP12.53□□□□□ -0.4
CLCN4-203ENST00000421085 REXO5Q96IC2 774 aaKnown RBP12.53□□□□□ -0.4
CLCN4-203ENST00000421085 ARHGAP28Q9P2N2 729 aa12.53□□□□□ -0.4
CLCN4-203ENST00000421085 ASTN2O75129 1339 aaPredicted RBP12.52□□□□□ -0.4
CLCN4-203ENST00000421085 MYO3AQ8NEV4 1616 aa12.52□□□□□ -0.4
CLCN4-203ENST00000421085 PRR5-ARHGAP8B1AHC4 643 aa12.52□□□□□ -0.4
CLCN4-203ENST00000421085 CYP1A2P05177 515 aa12.52□□□□□ -0.4
CLCN4-203ENST00000421085 SP100P23497 879 aaPredicted RBP12.52□□□□□ -0.4
CLCN4-203ENST00000421085 ARHGAP8P85298 464 aa12.52□□□□□ -0.4
CLCN4-203ENST00000421085 EGFLAMQ63HQ2 1017 aa12.52□□□□□ -0.4
CLCN4-203ENST00000421085 TFAP2DQ7Z6R9 452 aa12.52□□□□□ -0.4
CLCN4-203ENST00000421085 SLITRK2Q9H156 845 aa12.52□□□□□ -0.4
CLCN4-203ENST00000421085 S100A14Q9HCY8 104 aa12.52□□□□□ -0.4
CLCN4-203ENST00000421085 DSEQ9UL01 958 aa12.52□□□□□ -0.4
CLCN4-203ENST00000421085 TMCO1Q9UM00 188 aa12.52□□□□□ -0.4
CLCN4-203ENST00000421085 WBP11Q9Y2W2 641 aaKnown RBP12.52□□□□□ -0.4
CLCN4-203ENST00000421085 TULP4Q9NRJ4 1543 aa12.52□□□□□ -0.4
CLCN4-203ENST00000421085 PEX11AO75192 247 aa12.52□□□□□ -0.4
CLCN4-203ENST00000421085 STX11O75558 287 aa12.52□□□□□ -0.4
CLCN4-203ENST00000421085 NADKO95544 446 aaPredicted RBP12.52□□□□□ -0.4
CLCN4-203ENST00000421085 CALCAP01258 141 aa12.52□□□□□ -0.4
CLCN4-203ENST00000421085 RHOCP08134 193 aa12.52□□□□□ -0.4
CLCN4-203ENST00000421085 AKR1D1P51857 326 aa12.52□□□□□ -0.4
CLCN4-203ENST00000421085 FCHO2Q0JRZ9 810 aa12.52□□□□□ -0.4
CLCN4-203ENST00000421085 FAM187BQ17R55 369 aa12.52□□□□□ -0.4
CLCN4-203ENST00000421085 FNBP1LQ5T0N5 605 aa12.52□□□□□ -0.4
CLCN4-203ENST00000421085 AHI1Q8N157 1196 aa12.52□□□□□ -0.4
CLCN4-203ENST00000421085 PROX1Q92786 737 aa12.52□□□□□ -0.4
CLCN4-203ENST00000421085 PPP1R14AQ96A00 147 aa12.52□□□□□ -0.4
CLCN4-203ENST00000421085 KLHL32Q96NJ5 620 aa12.52□□□□□ -0.4
CLCN4-203ENST00000421085 ZNF112Q9UJU3 913 aa12.52□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms