RNA–Protein interactions for RNA: ENST00000418457.6

VPS41-206, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5

Gene VPS41, Length 532 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-206ENST00000418457 CNGA4Q8IV77 575 aa2.94□□□□□ -1.94
VPS41-206ENST00000418457 TCP11L2Q8N4U5 519 aa2.94□□□□□ -1.94
VPS41-206ENST00000418457 MYRIPQ8NFW9 859 aa2.94□□□□□ -1.94
VPS41-206ENST00000418457 GADD45GIP1Q8TAE8 222 aaPredicted RBP2.94□□□□□ -1.94
VPS41-206ENST00000418457 SPPL3Q8TCT6 385 aa2.94□□□□□ -1.94
VPS41-206ENST00000418457 SLC2A12Q8TD20 617 aa2.94□□□□□ -1.94
VPS41-206ENST00000418457 CLEC4CQ8WTT0 213 aa2.94□□□□□ -1.94
VPS41-206ENST00000418457 AFG1LQ8WV93 481 aa2.94□□□□□ -1.94
VPS41-206ENST00000418457 KAT2BQ92831 832 aa2.94□□□□□ -1.94
VPS41-206ENST00000418457 SDCCAG3Q96C92 435 aa2.94□□□□□ -1.94
VPS41-206ENST00000418457 PIGSQ96S52 555 aa2.94□□□□□ -1.94
VPS41-206ENST00000418457 GATA5Q9BWX5 397 aaPredicted RBP2.94□□□□□ -1.94
VPS41-206ENST00000418457 QTRT1Q9BXR0 403 aaKnown RBP2.94□□□□□ -1.94
VPS41-206ENST00000418457 OSBPL5Q9H0X9 879 aaPredicted RBP2.94□□□□□ -1.94
VPS41-206ENST00000418457 ABHD16BQ9H3Z7 469 aa2.94□□□□□ -1.94
VPS41-206ENST00000418457 PDE11AQ9HCR9 933 aa2.94□□□□□ -1.94
VPS41-206ENST00000418457 ERVK-5Q9HDB9 667 aa2.94□□□□□ -1.94
VPS41-206ENST00000418457 G6PC2Q9NQR9 355 aa2.94□□□□□ -1.94
VPS41-206ENST00000418457 ITM2CQ9NQX7 267 aa2.94□□□□□ -1.94
VPS41-206ENST00000418457 KLHL13Q9P2N7 655 aa2.94□□□□□ -1.94
VPS41-206ENST00000418457 PI4KBQ9UBF8 816 aa2.94□□□□□ -1.94
VPS41-206ENST00000418457 IPO11Q9UI26 975 aaKnown RBP2.94□□□□□ -1.94
VPS41-206ENST00000418457 NOL7Q9UMY1 257 aaKnown RBP2.94□□□□□ -1.94
VPS41-206ENST00000418457 LZTS1Q9Y250 596 aa2.94□□□□□ -1.94
VPS41-206ENST00000418457 FRMD4BQ9Y2L6 1034 aa2.94□□□□□ -1.94
VPS41-206ENST00000418457 GPR52Q9Y2T5 361 aa2.94□□□□□ -1.94
VPS41-206ENST00000418457 KIF24Q5T7B8 1368 aa2.94□□□□□ -1.94
VPS41-206ENST00000418457 ANKRD36BQ8N2N9 1353 aa2.94□□□□□ -1.94
VPS41-206ENST00000418457 GLI2P10070 1586 aa2.94□□□□□ -1.94
VPS41-206ENST00000418457 CDC42BPGQ6DT37 1551 aa2.94□□□□□ -1.94
VPS41-206ENST00000418457 RPGRIP1LQ68CZ1 1315 aa2.93□□□□□ -1.94
VPS41-206ENST00000418457 ZFYVE9O95405 1425 aa2.93□□□□□ -1.94
VPS41-206ENST00000418457 NOS1P29475 1434 aa2.93□□□□□ -1.94
VPS41-206ENST00000418457 ZCCHC11Q5TAX3 1644 aaKnown RBP2.93□□□□□ -1.94
VPS41-206ENST00000418457 ARHGEF28Q8N1W1 1705 aaKnown RBP2.93□□□□□ -1.94
VPS41-206ENST00000418457 MROH2AA6NES4 1674 aa2.93□□□□□ -1.94
VPS41-206ENST00000418457 CLTCQ00610 1675 aaKnown RBP2.93□□□□□ -1.94
VPS41-206ENST00000418457 PIK3R4Q99570 1358 aa2.93□□□□□ -1.94
VPS41-206ENST00000418457 FAM90A20PA6NIJ5 464 aa2.93□□□□□ -1.94
VPS41-206ENST00000418457 CGB1A6NKQ9 187 aa2.93□□□□□ -1.94
VPS41-206ENST00000418457 B9A039 149 aa2.93□□□□□ -1.94
VPS41-206ENST00000418457 SEPT4O43236 478 aa2.93□□□□□ -1.94
VPS41-206ENST00000418457 MBD3O95983 291 aa2.93□□□□□ -1.94
VPS41-206ENST00000418457 TK1P04183 234 aa2.93□□□□□ -1.94
VPS41-206ENST00000418457 CELA2AP08217 269 aa2.93□□□□□ -1.94
VPS41-206ENST00000418457 CYP21A2P08686 494 aa2.93□□□□□ -1.94
VPS41-206ENST00000418457 ALDOCP09972 364 aaKnown RBP2.93□□□□□ -1.94
VPS41-206ENST00000418457 RFPL3SP0C7P2 107 aa2.93□□□□□ -1.94
VPS41-206ENST00000418457 TFEBP19484 476 aa2.93□□□□□ -1.94
VPS41-206ENST00000418457 RXRAP19793 462 aa2.93□□□□□ -1.94
VPS41-206ENST00000418457 KELP23276 732 aa2.93□□□□□ -1.94
VPS41-206ENST00000418457 ATP5F1P24539 256 aaPredicted RBP2.93□□□□□ -1.94
VPS41-206ENST00000418457 HOXA7P31268 230 aaPredicted RBP2.93□□□□□ -1.94
VPS41-206ENST00000418457 PAPOLAP51003 745 aaKnown RBP2.93□□□□□ -1.94
VPS41-206ENST00000418457 SLC12A2P55011 1212 aa2.93□□□□□ -1.94
VPS41-206ENST00000418457 ACTR2P61160 394 aa2.93□□□□□ -1.94
VPS41-206ENST00000418457 MRPS21P82921 87 aaKnown RBP2.93□□□□□ -1.94
VPS41-206ENST00000418457 NUCB1Q02818 461 aa2.93□□□□□ -1.94
VPS41-206ENST00000418457 BIRC3Q13489 604 aa2.93□□□□□ -1.94
VPS41-206ENST00000418457 DCTN1Q14203 1278 aa2.93□□□□□ -1.94
VPS41-206ENST00000418457 RABEP1Q15276 862 aa2.93□□□□□ -1.94
VPS41-206ENST00000418457 EZH2Q15910 746 aaKnown RBP2.93□□□□□ -1.94
VPS41-206ENST00000418457 GPR162Q16538 588 aa2.93□□□□□ -1.94
VPS41-206ENST00000418457 SUPT20HL1Q3ZLR7 823 aa2.93□□□□□ -1.94
VPS41-206ENST00000418457 ZNF474Q6S9Z5 364 aaPredicted RBP2.93□□□□□ -1.94
VPS41-206ENST00000418457 ATF7IPQ6VMQ6 1270 aa2.93□□□□□ -1.94
VPS41-206ENST00000418457 RBM44Q6ZP01 1051 aaKnown RBP2.93□□□□□ -1.94
VPS41-206ENST00000418457 NEK8Q86SG6 692 aa2.93□□□□□ -1.94
VPS41-206ENST00000418457 ZNF354CQ86Y25 554 aa2.93□□□□□ -1.94
VPS41-206ENST00000418457 C2CD5Q86YS7 1000 aa2.93□□□□□ -1.94
VPS41-206ENST00000418457 ANKRD18AQ8IVF6 992 aa2.93□□□□□ -1.94
VPS41-206ENST00000418457 SUGP1Q8IWZ8 645 aaKnown RBP2.93□□□□□ -1.94
VPS41-206ENST00000418457 SMAP1Q8IYB5 467 aaPredicted RBP2.93□□□□□ -1.94
VPS41-206ENST00000418457 ADGRF3Q8IZF5 1079 aa2.93□□□□□ -1.94
VPS41-206ENST00000418457 FSIP1Q8NA03 581 aa2.93□□□□□ -1.94
VPS41-206ENST00000418457 ARHGAP45Q92619 1136 aa2.93□□□□□ -1.94
VPS41-206ENST00000418457 CUL5Q93034 780 aa2.93□□□□□ -1.94
VPS41-206ENST00000418457 RILPL2Q969X0 211 aa2.93□□□□□ -1.94
VPS41-206ENST00000418457 ARRDC3Q96B67 414 aa2.93□□□□□ -1.94
VPS41-206ENST00000418457 ZSCAN31Q96LW9 406 aaPredicted RBP2.93□□□□□ -1.94
VPS41-206ENST00000418457 NPAS1Q99742 590 aa2.93□□□□□ -1.94
VPS41-206ENST00000418457 PANK2Q9BZ23 570 aa2.93□□□□□ -1.94
VPS41-206ENST00000418457 TWSG1Q9GZX9 223 aa2.93□□□□□ -1.94
VPS41-206ENST00000418457 CHODLQ9H9P2 273 aa2.93□□□□□ -1.94
VPS41-206ENST00000418457 MLXIPLQ9NP71 852 aa2.93□□□□□ -1.94
VPS41-206ENST00000418457 NRIP3Q9NQ35 241 aa2.93□□□□□ -1.94
VPS41-206ENST00000418457 SMC4Q9NTJ3 1288 aa2.93□□□□□ -1.94
VPS41-206ENST00000418457 LUZP4Q9P127 313 aa2.93□□□□□ -1.94
VPS41-206ENST00000418457 NOL12Q9UGY1 213 aaKnown RBP eCLIP2.93□□□□□ -1.94
VPS41-206ENST00000418457 FEM1BQ9UK73 627 aa2.93□□□□□ -1.94
VPS41-206ENST00000418457 RCE1Q9Y256 329 aa2.93□□□□□ -1.94
VPS41-206ENST00000418457 DGKBQ9Y6T7 804 aa2.93□□□□□ -1.94
VPS41-206ENST00000418457 KIF20BQ96Q89 1820 aa2.93□□□□□ -1.94
VPS41-206ENST00000418457 MROH1Q8NDA8 1641 aa2.93□□□□□ -1.94
VPS41-206ENST00000418457 PTCH1Q13635 1447 aa2.93□□□□□ -1.94
VPS41-206ENST00000418457 SPAG9O60271 1321 aaKnown RBP2.93□□□□□ -1.94
VPS41-206ENST00000418457 ADGRB1O14514 1584 aa2.92□□□□□ -1.94
VPS41-206ENST00000418457 LMTK3Q96Q04 1460 aa2.92□□□□□ -1.94
VPS41-206ENST00000418457 CYP2D7A0A087X1C5 515 aa2.92□□□□□ -1.94
VPS41-206ENST00000418457 LOC102724159A0A0B4J2E5 919 aa2.92□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms