RNA–Protein interactions for RNA: ENST00000417814.3

TNFRSF8-203, Transcript of TNF receptor superfamily member 8, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF8, Length 3,593 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF8-203ENST00000417814 MAVSQ7Z434 540 aa13.45□□□□□ -0.26
TNFRSF8-203ENST00000417814 OPTNQ96CV9 577 aa13.45□□□□□ -0.26
TNFRSF8-203ENST00000417814 EMCNQ9ULC0 261 aa13.45□□□□□ -0.26
TNFRSF8-203ENST00000417814 UBA6A0AVT1 1052 aaPredicted RBP13.45□□□□□ -0.26
TNFRSF8-203ENST00000417814 OR51F1A6NGY5 319 aa13.45□□□□□ -0.26
TNFRSF8-203ENST00000417814 NR4A1P22736 598 aa13.45□□□□□ -0.26
TNFRSF8-203ENST00000417814 TPP2P29144 1249 aaPredicted RBP13.45□□□□□ -0.26
TNFRSF8-203ENST00000417814 CRHR1P34998 444 aa13.45□□□□□ -0.26
TNFRSF8-203ENST00000417814 GP5P40197 560 aa13.45□□□□□ -0.26
TNFRSF8-203ENST00000417814 KCTD21Q4G0X4 260 aa13.45□□□□□ -0.26
TNFRSF8-203ENST00000417814 ZNF470Q6ECI4 717 aa13.45□□□□□ -0.26
TNFRSF8-203ENST00000417814 PPP1R2P3Q6NXS1 205 aa13.45□□□□□ -0.26
TNFRSF8-203ENST00000417814 RELL1Q8IUW5 271 aa13.45□□□□□ -0.26
TNFRSF8-203ENST00000417814 DNERQ8NFT8 737 aa13.45□□□□□ -0.26
TNFRSF8-203ENST00000417814 VPS39Q96JC1 886 aa13.45□□□□□ -0.26
TNFRSF8-203ENST00000417814 GAD1Q99259 594 aa13.45□□□□□ -0.26
TNFRSF8-203ENST00000417814 CIB1Q99828 191 aa13.45□□□□□ -0.26
TNFRSF8-203ENST00000417814 MRPL1Q9BYD6 325 aaKnown RBP13.45□□□□□ -0.26
TNFRSF8-203ENST00000417814 ACE2Q9BYF1 805 aaPredicted RBP13.45□□□□□ -0.26
TNFRSF8-203ENST00000417814 TKTL2Q9H0I9 626 aa13.45□□□□□ -0.26
TNFRSF8-203ENST00000417814 SPON1Q9HCB6 807 aa13.45□□□□□ -0.26
TNFRSF8-203ENST00000417814 MAP3K20Q9NYL2 800 aaKnown RBP13.45□□□□□ -0.26
TNFRSF8-203ENST00000417814 RNF181Q9P0P0 153 aa13.45□□□□□ -0.26
TNFRSF8-203ENST00000417814 PTGDR2Q9Y5Y4 395 aa13.45□□□□□ -0.26
TNFRSF8-203ENST00000417814 E7ESA3 106 aa13.45□□□□□ -0.26
TNFRSF8-203ENST00000417814 FAM189A1O60320 539 aa13.45□□□□□ -0.26
TNFRSF8-203ENST00000417814 TRIM13O60858 407 aa13.45□□□□□ -0.26
TNFRSF8-203ENST00000417814 WFS1O76024 890 aa13.45□□□□□ -0.26
TNFRSF8-203ENST00000417814 CLPTM1O96005 669 aa13.45□□□□□ -0.26
TNFRSF8-203ENST00000417814 OR4Q2P0C623 313 aa13.45□□□□□ -0.26
TNFRSF8-203ENST00000417814 BDNFP23560 247 aa13.45□□□□□ -0.26
TNFRSF8-203ENST00000417814 TNFAIP2Q03169 654 aa13.45□□□□□ -0.26
TNFRSF8-203ENST00000417814 PPP1R8Q12972 351 aaKnown RBP13.45□□□□□ -0.26
TNFRSF8-203ENST00000417814 MTX3Q5HYI7 312 aa13.45□□□□□ -0.26
TNFRSF8-203ENST00000417814 SEL1L3Q68CR1 1132 aa13.45□□□□□ -0.26
TNFRSF8-203ENST00000417814 ESRP1Q6NXG1 681 aaKnown RBP13.45□□□□□ -0.26
TNFRSF8-203ENST00000417814 ACAD11Q709F0 780 aa13.45□□□□□ -0.26
TNFRSF8-203ENST00000417814 MIB1Q86YT6 1006 aa13.45□□□□□ -0.26
TNFRSF8-203ENST00000417814 ENDOVQ8N8Q3 282 aaKnown RBP13.45□□□□□ -0.26
TNFRSF8-203ENST00000417814 MIPOL1Q8TD10 442 aa13.45□□□□□ -0.26
TNFRSF8-203ENST00000417814 UBE2OQ9C0C9 1292 aaKnown RBP13.45□□□□□ -0.26
TNFRSF8-203ENST00000417814 WDCPQ9H6R7 721 aa13.45□□□□□ -0.26
TNFRSF8-203ENST00000417814 FBRSL1Q9HCM7 1045 aaKnown RBP13.45□□□□□ -0.26
TNFRSF8-203ENST00000417814 RBPJLQ9UBG7 517 aa13.45□□□□□ -0.26
TNFRSF8-203ENST00000417814 ZDHHC2Q9UIJ5 367 aa13.45□□□□□ -0.26
TNFRSF8-203ENST00000417814 A0A0U1RQS6 177 aa13.44□□□□□ -0.26
TNFRSF8-203ENST00000417814 RNF103-CHMP3A0A140T963 221 aa13.44□□□□□ -0.26
TNFRSF8-203ENST00000417814 MYBPHLA2RUH7 354 aa13.44□□□□□ -0.26
TNFRSF8-203ENST00000417814 TSPAN1O60635 241 aa13.44□□□□□ -0.26
TNFRSF8-203ENST00000417814 SPAG6O75602 509 aa13.44□□□□□ -0.26
TNFRSF8-203ENST00000417814 CYP2B6P20813 491 aa13.44□□□□□ -0.26
TNFRSF8-203ENST00000417814 PIK3R1P27986 724 aa13.44□□□□□ -0.26
TNFRSF8-203ENST00000417814 CCNIQ14094 377 aa13.44□□□□□ -0.26
TNFRSF8-203ENST00000417814 PPP1R3AQ16821 1122 aa13.44□□□□□ -0.26
TNFRSF8-203ENST00000417814 MBLAC2Q68D91 279 aa13.44□□□□□ -0.26
TNFRSF8-203ENST00000417814 OR52E8Q6IFG1 317 aa13.44□□□□□ -0.26
TNFRSF8-203ENST00000417814 MTHFD1LQ6UB35 978 aa13.44□□□□□ -0.26
TNFRSF8-203ENST00000417814 ZNF534Q76KX8 674 aa13.44□□□□□ -0.26
TNFRSF8-203ENST00000417814 CCDC106Q9BWC9 280 aa13.44□□□□□ -0.26
TNFRSF8-203ENST00000417814 C15orf38-AP3S2A0A0A6YYH1 394 aa13.44□□□□□ -0.26
TNFRSF8-203ENST00000417814 MDM4O15151 490 aa13.44□□□□□ -0.26
TNFRSF8-203ENST00000417814 CYLC2Q14093 348 aaPredicted RBP13.44□□□□□ -0.26
TNFRSF8-203ENST00000417814 RNF111Q6ZNA4 994 aa13.44□□□□□ -0.26
TNFRSF8-203ENST00000417814 CHST15Q7LFX5 561 aaPredicted RBP13.44□□□□□ -0.26
TNFRSF8-203ENST00000417814 NET1Q7Z628 596 aaPredicted RBP13.44□□□□□ -0.26
TNFRSF8-203ENST00000417814 ARPINQ7Z6K5 226 aa13.44□□□□□ -0.26
TNFRSF8-203ENST00000417814 CHSY1Q86X52 802 aa13.44□□□□□ -0.26
TNFRSF8-203ENST00000417814 OR52K2Q8NGK3 314 aa13.44□□□□□ -0.26
TNFRSF8-203ENST00000417814 SLC4A5Q9BY07 1137 aa13.44□□□□□ -0.26
TNFRSF8-203ENST00000417814 SOX17Q9H6I2 414 aaPredicted RBP13.44□□□□□ -0.26
TNFRSF8-203ENST00000417814 DDX43Q9NXZ2 648 aaKnown RBP13.44□□□□□ -0.26
TNFRSF8-203ENST00000417814 PCDH10Q9P2E7 1040 aa13.44□□□□□ -0.26
TNFRSF8-203ENST00000417814 RREB1Q92766 1687 aa13.44□□□□□ -0.26
TNFRSF8-203ENST00000417814 ZNF839A8K0R7 811 aa13.43□□□□□ -0.26
TNFRSF8-203ENST00000417814 NDC80O14777 642 aa13.43□□□□□ -0.26
TNFRSF8-203ENST00000417814 EEF1B2P24534 225 aaKnown RBP13.43□□□□□ -0.26
TNFRSF8-203ENST00000417814 EPHX2P34913 555 aa13.43□□□□□ -0.26
TNFRSF8-203ENST00000417814 SERPINB9P50453 376 aa13.43□□□□□ -0.26
TNFRSF8-203ENST00000417814 CSE1LP55060 971 aaKnown RBP13.43□□□□□ -0.26
TNFRSF8-203ENST00000417814 SOX4Q06945 474 aaPredicted RBP13.43□□□□□ -0.26
TNFRSF8-203ENST00000417814 PLA2G4EQ3MJ16 856 aa13.43□□□□□ -0.26
TNFRSF8-203ENST00000417814 FSCBQ5H9T9 825 aa13.43□□□□□ -0.26
TNFRSF8-203ENST00000417814 CYP4V2Q6ZWL3 525 aaPredicted RBP13.43□□□□□ -0.26
TNFRSF8-203ENST00000417814 DSELQ8IZU8 1212 aa13.43□□□□□ -0.26
TNFRSF8-203ENST00000417814 NIPA2Q8N8Q9 360 aa13.43□□□□□ -0.26
TNFRSF8-203ENST00000417814 SLC10A4Q96EP9 437 aa13.43□□□□□ -0.26
TNFRSF8-203ENST00000417814 DCDC2Q9UHG0 476 aa13.43□□□□□ -0.26
TNFRSF8-203ENST00000417814 PGAP2Q9UHJ9 254 aa13.43□□□□□ -0.26
TNFRSF8-203ENST00000417814 BNIP3LO60238 219 aa13.43□□□□□ -0.26
TNFRSF8-203ENST00000417814 B3GAT3O94766 335 aa13.43□□□□□ -0.26
TNFRSF8-203ENST00000417814 C22orf31O95567 290 aa13.43□□□□□ -0.26
TNFRSF8-203ENST00000417814 BST2Q10589 180 aaKnown RBP13.43□□□□□ -0.26
TNFRSF8-203ENST00000417814 DYNC1I2Q13409 638 aaKnown RBP13.43□□□□□ -0.26
TNFRSF8-203ENST00000417814 LIN52Q52LA3 116 aa13.43□□□□□ -0.26
TNFRSF8-203ENST00000417814 SCAMP5Q8TAC9 235 aa13.43□□□□□ -0.26
TNFRSF8-203ENST00000417814 PPP2R3CQ969Q6 453 aa13.43□□□□□ -0.26
TNFRSF8-203ENST00000417814 PAAF1Q9BRP4 392 aa13.43□□□□□ -0.26
TNFRSF8-203ENST00000417814 OR12D3Q9UGF7 316 aa13.43□□□□□ -0.26
TNFRSF8-203ENST00000417814 LZTS1Q9Y250 596 aa13.43□□□□□ -0.26
TNFRSF8-203ENST00000417814 NRAPQ86VF7 1730 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms