RNA–Protein interactions for RNA: ENST00000417652.5

NCL-203, Transcript of nucleolin, humanhuman

TSL 4

Gene NCL, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCL-203ENST00000417652 RNF43Q68DV7 783 aa7.05□□□□□ -1.28
NCL-203ENST00000417652 LINGO4Q6UY18 593 aa7.05□□□□□ -1.28
NCL-203ENST00000417652 SLC36A4Q6YBV0 504 aa7.05□□□□□ -1.28
NCL-203ENST00000417652 RFX8Q6ZV50 586 aa7.05□□□□□ -1.28
NCL-203ENST00000417652 LPCAT2Q7L5N7 544 aa7.05□□□□□ -1.28
NCL-203ENST00000417652 FAM124AQ86V42 546 aa7.05□□□□□ -1.28
NCL-203ENST00000417652 ALYREFQ86V81 257 aaKnown RBP7.05□□□□□ -1.28
NCL-203ENST00000417652 RASSF3Q86WH2 238 aa7.05□□□□□ -1.28
NCL-203ENST00000417652 ZNF683Q8IZ20 524 aa7.05□□□□□ -1.28
NCL-203ENST00000417652 KDM1BQ8NB78 822 aa7.05□□□□□ -1.28
NCL-203ENST00000417652 OLIG1Q8TAK6 271 aa7.05□□□□□ -1.28
NCL-203ENST00000417652 OR8D1Q8WZ84 308 aa7.05□□□□□ -1.28
NCL-203ENST00000417652 SPOCK2Q92563 424 aa7.05□□□□□ -1.28
NCL-203ENST00000417652 LMLNQ96KR4 655 aa7.05□□□□□ -1.28
NCL-203ENST00000417652 MRGPRX1Q96LB2 322 aa7.05□□□□□ -1.28
NCL-203ENST00000417652 PHOX2BQ99453 314 aa7.05□□□□□ -1.28
NCL-203ENST00000417652 OMDQ99983 421 aa7.05□□□□□ -1.28
NCL-203ENST00000417652 CALN1Q9BXU9 219 aa7.05□□□□□ -1.28
NCL-203ENST00000417652 MAK16Q9BXY0 300 aaKnown RBP7.05□□□□□ -1.28
NCL-203ENST00000417652 SLC6A17Q9H1V8 727 aa7.05□□□□□ -1.28
NCL-203ENST00000417652 TMEM245Q9H330 911 aa7.05□□□□□ -1.28
NCL-203ENST00000417652 MTG2Q9H4K7 406 aa7.05□□□□□ -1.28
NCL-203ENST00000417652 OSGEPQ9NPF4 335 aa7.05□□□□□ -1.28
NCL-203ENST00000417652 PRSS16Q9NQE7 514 aa7.05□□□□□ -1.28
NCL-203ENST00000417652 STAU2Q9NUL3 570 aaKnown RBP eCLIP7.05□□□□□ -1.28
NCL-203ENST00000417652 TMEM248Q9NWD8 314 aa7.05□□□□□ -1.28
NCL-203ENST00000417652 VPS51Q9UID3 782 aa7.05□□□□□ -1.28
NCL-203ENST00000417652 HCN2Q9UL51 889 aa7.05□□□□□ -1.28
NCL-203ENST00000417652 CYP8B1Q9UNU6 501 aa7.05□□□□□ -1.28
NCL-203ENST00000417652 SMG5Q9UPR3 1016 aaKnown RBP7.05□□□□□ -1.28
NCL-203ENST00000417652 RIF1Q5UIP0 2472 aaKnown RBP7.05□□□□□ -1.28
NCL-203ENST00000417652 ABCA7Q8IZY2 2146 aa7.04□□□□□ -1.28
NCL-203ENST00000417652 THADAQ6YHU6 1953 aa7.04□□□□□ -1.28
NCL-203ENST00000417652 SPAG17Q6Q759 2223 aa7.04□□□□□ -1.28
NCL-203ENST00000417652 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa7.04□□□□□ -1.28
NCL-203ENST00000417652 ZSCAN5CA6NGD5 496 aaPredicted RBP7.04□□□□□ -1.28
NCL-203ENST00000417652 SOWAHDA6NJG2 315 aa7.04□□□□□ -1.28
NCL-203ENST00000417652 RASA4BC9J798 803 aa7.04□□□□□ -1.28
NCL-203ENST00000417652 DFFAO00273 331 aa7.04□□□□□ -1.28
NCL-203ENST00000417652 DCLK1O15075 740 aa7.04□□□□□ -1.28
NCL-203ENST00000417652 RASA4O43374 803 aa7.04□□□□□ -1.28
NCL-203ENST00000417652 SNAP91O60641 907 aa7.04□□□□□ -1.28
NCL-203ENST00000417652 LILRB5O75023 590 aa7.04□□□□□ -1.28
NCL-203ENST00000417652 SIN3BO75182 1162 aa7.04□□□□□ -1.28
NCL-203ENST00000417652 NEBLO76041 1014 aa7.04□□□□□ -1.28
NCL-203ENST00000417652 PTMAP06454 111 aaKnown RBP7.04□□□□□ -1.28
NCL-203ENST00000417652 RARAP10276 462 aa7.04□□□□□ -1.28
NCL-203ENST00000417652 GOT1P17174 413 aa7.04□□□□□ -1.28
NCL-203ENST00000417652 ERCC2P18074 760 aa7.04□□□□□ -1.28
NCL-203ENST00000417652 SLC8A1P32418 973 aa7.04□□□□□ -1.28
NCL-203ENST00000417652 ACVRL1P37023 503 aa7.04□□□□□ -1.28
NCL-203ENST00000417652 SLC1A1P43005 524 aa7.04□□□□□ -1.28
NCL-203ENST00000417652 PSMD8P48556 350 aa7.04□□□□□ -1.28
NCL-203ENST00000417652 MRE11P49959 708 aa7.04□□□□□ -1.28
NCL-203ENST00000417652 YBEYP58557 167 aaPredicted RBP7.04□□□□□ -1.28
NCL-203ENST00000417652 RPL6Q02878 288 aaKnown RBP7.04□□□□□ -1.28
NCL-203ENST00000417652 CREB5Q02930 508 aa7.04□□□□□ -1.28
NCL-203ENST00000417652 ZNF252P-AS1Q0IIN9 211 aa7.04□□□□□ -1.28
NCL-203ENST00000417652 CCDC15Q0P6D6 951 aa7.04□□□□□ -1.28
NCL-203ENST00000417652 CAMK2GQ13555 558 aaPredicted RBP7.04□□□□□ -1.28
NCL-203ENST00000417652 IFI16Q16666 785 aaKnown RBP7.04□□□□□ -1.28
NCL-203ENST00000417652 CA9Q16790 459 aa7.04□□□□□ -1.28
NCL-203ENST00000417652 PTPRNQ16849 979 aa7.04□□□□□ -1.28
NCL-203ENST00000417652 PARP15Q460N3 678 aa7.04□□□□□ -1.28
NCL-203ENST00000417652 SYCP2LQ5T4T6 812 aa7.04□□□□□ -1.28
NCL-203ENST00000417652 FAM46CQ5VWP2 391 aa7.04□□□□□ -1.28
NCL-203ENST00000417652 LAIR1Q6GTX8 287 aa7.04□□□□□ -1.28
NCL-203ENST00000417652 TMCO3Q6UWJ1 677 aa7.04□□□□□ -1.28
NCL-203ENST00000417652 LEKR1Q6ZMV7 388 aa7.04□□□□□ -1.28
NCL-203ENST00000417652 KBTBD6Q86V97 674 aa7.04□□□□□ -1.28
NCL-203ENST00000417652 MMAAQ8IVH4 418 aaKnown RBP7.04□□□□□ -1.28
NCL-203ENST00000417652 TMEFF1Q8IYR6 380 aa7.04□□□□□ -1.28
NCL-203ENST00000417652 RGL4Q8IZJ4 473 aa7.04□□□□□ -1.28
NCL-203ENST00000417652 STK40Q8N2I9 435 aa7.04□□□□□ -1.28
NCL-203ENST00000417652 FAM160A2Q8N612 972 aaPredicted RBP7.04□□□□□ -1.28
NCL-203ENST00000417652 DEFB119Q8N690 84 aa7.04□□□□□ -1.28
NCL-203ENST00000417652 ARFGAP1Q8N6T3 406 aa7.04□□□□□ -1.28
NCL-203ENST00000417652 NIPA2Q8N8Q9 360 aa7.04□□□□□ -1.28
NCL-203ENST00000417652 RTL3Q8N8U3 475 aaKnown RBP7.04□□□□□ -1.28
NCL-203ENST00000417652 DCAF4L2Q8NA75 395 aa7.04□□□□□ -1.28
NCL-203ENST00000417652 OR52K2Q8NGK3 314 aa7.04□□□□□ -1.28
NCL-203ENST00000417652 TRAF3IP1Q8TDR0 691 aaPredicted RBP7.04□□□□□ -1.28
NCL-203ENST00000417652 NSMCE1Q8WV22 266 aa7.04□□□□□ -1.28
NCL-203ENST00000417652 TEKT4Q8WW24 435 aa7.04□□□□□ -1.28
NCL-203ENST00000417652 RFFLQ8WZ73 363 aa7.04□□□□□ -1.28
NCL-203ENST00000417652 RUBCNQ92622 972 aa7.04□□□□□ -1.28
NCL-203ENST00000417652 NELL1Q92832 810 aa7.04□□□□□ -1.28
NCL-203ENST00000417652 ARHGEF2Q92974 986 aaKnown RBP7.04□□□□□ -1.28
NCL-203ENST00000417652 CELF6Q96J87 481 aaKnown RBP7.04□□□□□ -1.28
NCL-203ENST00000417652 PEBP4Q96S96 227 aa7.04□□□□□ -1.28
NCL-203ENST00000417652 KCTD15Q96SI1 283 aaPredicted RBP7.04□□□□□ -1.28
NCL-203ENST00000417652 EPC1Q9H2F5 836 aa7.04□□□□□ -1.28
NCL-203ENST00000417652 GRPEL1Q9HAV7 217 aa7.04□□□□□ -1.28
NCL-203ENST00000417652 DYRK4Q9NR20 520 aa7.04□□□□□ -1.28
NCL-203ENST00000417652 RALGAPA1Q6GYQ0 2036 aa7.04□□□□□ -1.28
NCL-203ENST00000417652 DOCK4Q8N1I0 1966 aa7.04□□□□□ -1.28
NCL-203ENST00000417652 LRRD1A4D1F6 860 aa7.03□□□□□ -1.28
NCL-203ENST00000417652 FAM47DPA6NHR8 397 aa7.03□□□□□ -1.28
NCL-203ENST00000417652 MEI4A8MW99 385 aa7.03□□□□□ -1.28
NCL-203ENST00000417652 PROB1E7EW31 1015 aa7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms