RNA–Protein interactions for RNA: ENST00000417545.4

TRIM48-201, Transcript of tripartite motif containing 48, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM48, Length 1,445 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48-201ENST00000417545 MFHAS1Q9Y4C4 1052 aa8.66□□□□□ -1.02
TRIM48-201ENST00000417545 TTLL3Q9Y4R7 772 aa8.66□□□□□ -1.02
TRIM48-201ENST00000417545 A0A0D9SEW6 157 aa8.65□□□□□ -1.02
TRIM48-201ENST00000417545 KRIT1O00522 736 aa8.65□□□□□ -1.02
TRIM48-201ENST00000417545 TRIM24O15164 1050 aa8.65□□□□□ -1.02
TRIM48-201ENST00000417545 ZBTB24O43167 697 aaPredicted RBP8.65□□□□□ -1.02
TRIM48-201ENST00000417545 BNIP3LO60238 219 aa8.65□□□□□ -1.02
TRIM48-201ENST00000417545 PRLRP16471 622 aa8.65□□□□□ -1.02
TRIM48-201ENST00000417545 IL4RP24394 825 aa8.65□□□□□ -1.02
TRIM48-201ENST00000417545 ACVRL1P37023 503 aa8.65□□□□□ -1.02
TRIM48-201ENST00000417545 TNFRSF4P43489 277 aa8.65□□□□□ -1.02
TRIM48-201ENST00000417545 RECQLP46063 649 aaPredicted RBP8.65□□□□□ -1.02
TRIM48-201ENST00000417545 EIF3EP60228 445 aaKnown RBP8.65□□□□□ -1.02
TRIM48-201ENST00000417545 ZXDAP98168 799 aa8.65□□□□□ -1.02
TRIM48-201ENST00000417545 ECT2LQ008S8 904 aa8.65□□□□□ -1.02
TRIM48-201ENST00000417545 OTUD4Q01804 1114 aaKnown RBP8.65□□□□□ -1.02
TRIM48-201ENST00000417545 GBE1Q04446 702 aa8.65□□□□□ -1.02
TRIM48-201ENST00000417545 SERINC3Q13530 473 aa8.65□□□□□ -1.02
TRIM48-201ENST00000417545 GEN1Q17RS7 908 aa8.65□□□□□ -1.02
TRIM48-201ENST00000417545 FUT11Q495W5 492 aa8.65□□□□□ -1.02
TRIM48-201ENST00000417545 FBXO43Q4G163 708 aa8.65□□□□□ -1.02
TRIM48-201ENST00000417545 PAPD7Q5XG87 772 aaKnown RBP8.65□□□□□ -1.02
TRIM48-201ENST00000417545 SERPINA13PQ6UXR4 307 aa8.65□□□□□ -1.02
TRIM48-201ENST00000417545 GSTA5Q7RTV2 222 aa8.65□□□□□ -1.02
TRIM48-201ENST00000417545 METTL3Q86U44 580 aaKnown RBP8.65□□□□□ -1.02
TRIM48-201ENST00000417545 LRRC49Q8IUZ0 686 aa8.65□□□□□ -1.02
TRIM48-201ENST00000417545 APCDD1Q8J025 514 aa8.65□□□□□ -1.02
TRIM48-201ENST00000417545 RYBPQ8N488 228 aaPredicted RBP8.65□□□□□ -1.02
TRIM48-201ENST00000417545 NPWQ8N729 165 aa8.65□□□□□ -1.02
TRIM48-201ENST00000417545 PQLC3Q8N755 202 aa8.65□□□□□ -1.02
TRIM48-201ENST00000417545 PLD5Q8N7P1 536 aa8.65□□□□□ -1.02
TRIM48-201ENST00000417545 ZNF513Q8N8E2 541 aaPredicted RBP8.65□□□□□ -1.02
TRIM48-201ENST00000417545 ATP11CQ8NB49 1132 aa8.65□□□□□ -1.02
TRIM48-201ENST00000417545 NETO2Q8NC67 525 aa8.65□□□□□ -1.02
TRIM48-201ENST00000417545 FLCNQ8NFG4 579 aa8.65□□□□□ -1.02
TRIM48-201ENST00000417545 ACTL9Q8TC94 416 aa8.65□□□□□ -1.02
TRIM48-201ENST00000417545 TFB1MQ8WVM0 346 aaKnown RBP8.65□□□□□ -1.02
TRIM48-201ENST00000417545 ACDQ96AP0 544 aa8.65□□□□□ -1.02
TRIM48-201ENST00000417545 NELL2Q99435 816 aa8.65□□□□□ -1.02
TRIM48-201ENST00000417545 CINPQ9BW66 212 aaPredicted RBP8.65□□□□□ -1.02
TRIM48-201ENST00000417545 FRMD8P1Q9BZ68 369 aaPredicted RBP8.65□□□□□ -1.02
TRIM48-201ENST00000417545 BRD8Q9H0E9 1235 aa8.65□□□□□ -1.02
TRIM48-201ENST00000417545 HOMER3Q9NSC5 361 aa8.65□□□□□ -1.02
TRIM48-201ENST00000417545 NDFIP2Q9NV92 336 aa8.65□□□□□ -1.02
TRIM48-201ENST00000417545 ELOVL2Q9NXB9 296 aa8.65□□□□□ -1.02
TRIM48-201ENST00000417545 RNF14Q9UBS8 474 aa8.65□□□□□ -1.02
TRIM48-201ENST00000417545 IPO11Q9UI26 975 aaKnown RBP8.65□□□□□ -1.02
TRIM48-201ENST00000417545 VPS51Q9UID3 782 aa8.65□□□□□ -1.02
TRIM48-201ENST00000417545 CLEC4EQ9ULY5 219 aa8.65□□□□□ -1.02
TRIM48-201ENST00000417545 NYNRINQ9P2P1 1898 aaKnown RBP8.65□□□□□ -1.02
TRIM48-201ENST00000417545 KANSL1LA0AUZ9 987 aa8.64□□□□□ -1.03
TRIM48-201ENST00000417545 HACD1B0YJ81 288 aa8.64□□□□□ -1.03
TRIM48-201ENST00000417545 ZNF185O15231 689 aa8.64□□□□□ -1.03
TRIM48-201ENST00000417545 MTSS1O43312 755 aa8.64□□□□□ -1.03
TRIM48-201ENST00000417545 KDELR3O43731 214 aa8.64□□□□□ -1.03
TRIM48-201ENST00000417545 SNAP91O60641 907 aa8.64□□□□□ -1.03
TRIM48-201ENST00000417545 EGFP01133 1207 aa8.64□□□□□ -1.03
TRIM48-201ENST00000417545 SRPRAP08240 638 aaKnown RBP8.64□□□□□ -1.03
TRIM48-201ENST00000417545 CISD3P0C7P0 127 aa8.64□□□□□ -1.03
TRIM48-201ENST00000417545 RBP3P10745 1247 aa8.64□□□□□ -1.03
TRIM48-201ENST00000417545 PECAM1P16284 738 aaPredicted RBP8.64□□□□□ -1.03
TRIM48-201ENST00000417545 CD72P21854 359 aa8.64□□□□□ -1.03
TRIM48-201ENST00000417545 GARSP41250 739 aaKnown RBP8.64□□□□□ -1.03
TRIM48-201ENST00000417545 TNNT3P45378 269 aaPredicted RBP8.64□□□□□ -1.03
TRIM48-201ENST00000417545 RHOAP61586 193 aa8.64□□□□□ -1.03
TRIM48-201ENST00000417545 IL10RBQ08334 325 aa8.64□□□□□ -1.03
TRIM48-201ENST00000417545 ITKQ08881 620 aa8.64□□□□□ -1.03
TRIM48-201ENST00000417545 SIGLEC14Q08ET2 396 aa8.64□□□□□ -1.03
TRIM48-201ENST00000417545 GALNT2Q10471 571 aa8.64□□□□□ -1.03
TRIM48-201ENST00000417545 SNX1Q13596 522 aa8.64□□□□□ -1.03
TRIM48-201ENST00000417545 TAZQ16635 292 aa8.64□□□□□ -1.03
TRIM48-201ENST00000417545 C2orf27AQ580R0 203 aa8.64□□□□□ -1.03
TRIM48-201ENST00000417545 TMEM196Q5HYL7 178 aa8.64□□□□□ -1.03
TRIM48-201ENST00000417545 DGKKQ5KSL6 1271 aa8.64□□□□□ -1.03
TRIM48-201ENST00000417545 NAIF1Q69YI7 327 aaPredicted RBP8.64□□□□□ -1.03
TRIM48-201ENST00000417545 TXNDC11Q6PKC3 985 aa8.64□□□□□ -1.03
TRIM48-201ENST00000417545 LEKR1Q6ZMV7 388 aa8.64□□□□□ -1.03
TRIM48-201ENST00000417545 CCDC13Q8IYE1 715 aa8.64□□□□□ -1.03
TRIM48-201ENST00000417545 CHPFQ8IZ52 775 aa8.64□□□□□ -1.03
TRIM48-201ENST00000417545 DDX51Q8N8A6 666 aaKnown RBP eCLIP8.64□□□□□ -1.03
TRIM48-201ENST00000417545 ACTRT1Q8TDG2 376 aa8.64□□□□□ -1.03
TRIM48-201ENST00000417545 USP33Q8TEY7 942 aa8.64□□□□□ -1.03
TRIM48-201ENST00000417545 COG1Q8WTW3 980 aa8.64□□□□□ -1.03
TRIM48-201ENST00000417545 CYB5D2Q8WUJ1 264 aa8.64□□□□□ -1.03
TRIM48-201ENST00000417545 HDAC11Q96DB2 347 aa8.64□□□□□ -1.03
TRIM48-201ENST00000417545 MS4A14Q96JA4 679 aa8.64□□□□□ -1.03
TRIM48-201ENST00000417545 FAM118BQ9BPY3 351 aa8.64□□□□□ -1.03
TRIM48-201ENST00000417545 OCEL1Q9H607 264 aa8.64□□□□□ -1.03
TRIM48-201ENST00000417545 LRRC19Q9H756 370 aa8.64□□□□□ -1.03
TRIM48-201ENST00000417545 TBC1D17Q9HA65 648 aa8.64□□□□□ -1.03
TRIM48-201ENST00000417545 DTLQ9NZJ0 730 aa8.64□□□□□ -1.03
TRIM48-201ENST00000417545 SAE1Q9UBE0 346 aaPredicted RBP8.64□□□□□ -1.03
TRIM48-201ENST00000417545 FBXO10Q9UK96 956 aa8.64□□□□□ -1.03
TRIM48-201ENST00000417545 ERVW-1Q9UQF0 538 aa8.64□□□□□ -1.03
TRIM48-201ENST00000417545 ZNF148Q9UQR1 794 aa8.64□□□□□ -1.03
TRIM48-201ENST00000417545 PRUNE2Q8WUY3 3088 aa8.64□□□□□ -1.03
TRIM48-201ENST00000417545 XIRP2A4UGR9 3374 aa8.64□□□□□ -1.03
TRIM48-201ENST00000417545 NUP205Q92621 2012 aa8.64□□□□□ -1.03
TRIM48-201ENST00000417545 CFAP69A5D8W1 941 aa8.63□□□□□ -1.03
TRIM48-201ENST00000417545 FAM170BA6NMN3 283 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms