RNA–Protein interactions for RNA: ENST00000417268.3

SCAF8-203, Transcript of SR-related CTD associated factor 8, humanhuman

TSL 2 BASIC

Gene SCAF8, Length 4,944 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF8-203ENST00000417268 TLR5O60602 858 aa13.03□□□□□ -0.32
SCAF8-203ENST00000417268 SMNDC1O75940 238 aaKnown RBP eCLIP13.03□□□□□ -0.32
SCAF8-203ENST00000417268 PGM3O95394 542 aa13.03□□□□□ -0.32
SCAF8-203ENST00000417268 SSTR1P30872 391 aa13.03□□□□□ -0.32
SCAF8-203ENST00000417268 RPA3P35244 121 aaPredicted RBP13.03□□□□□ -0.32
SCAF8-203ENST00000417268 INTS6LQ5JSJ4 861 aaKnown RBP13.03□□□□□ -0.32
SCAF8-203ENST00000417268 PDPK2PQ6A1A2 396 aa13.03□□□□□ -0.32
SCAF8-203ENST00000417268 FAM228AQ86W67 206 aa13.03□□□□□ -0.32
SCAF8-203ENST00000417268 VPS50Q96JG6 964 aa13.03□□□□□ -0.32
SCAF8-203ENST00000417268 APOL2Q9BQE5 337 aa13.03□□□□□ -0.32
SCAF8-203ENST00000417268 C2orf49Q9BVC5 232 aaPredicted RBP13.03□□□□□ -0.32
SCAF8-203ENST00000417268 KCNK1O00180 336 aa13.03□□□□□ -0.32
SCAF8-203ENST00000417268 FGFR1P11362 822 aa13.03□□□□□ -0.32
SCAF8-203ENST00000417268 MMP13P45452 471 aa13.03□□□□□ -0.32
SCAF8-203ENST00000417268 TRAF7Q6Q0C0 670 aa13.03□□□□□ -0.32
SCAF8-203ENST00000417268 ILDR2Q71H61 639 aa13.03□□□□□ -0.32
SCAF8-203ENST00000417268 CLVS1Q8IUQ0 354 aaPredicted RBP13.03□□□□□ -0.32
SCAF8-203ENST00000417268 TRIB2Q92519 343 aa13.03□□□□□ -0.32
SCAF8-203ENST00000417268 NDNQ99608 321 aa13.03□□□□□ -0.32
SCAF8-203ENST00000417268 UBA2Q9UBT2 640 aaPredicted RBP13.03□□□□□ -0.32
SCAF8-203ENST00000417268 SLC39A10Q9ULF5 831 aa13.03□□□□□ -0.32
SCAF8-203ENST00000417268 COQ4Q9Y3A0 265 aa13.03□□□□□ -0.32
SCAF8-203ENST00000417268 ATP5BP06576 529 aaKnown RBP13.03□□□□□ -0.32
SCAF8-203ENST00000417268 ZNF284Q2VY69 593 aa13.03□□□□□ -0.32
SCAF8-203ENST00000417268 SNRNP25Q9BV90 132 aaKnown RBP13.03□□□□□ -0.32
SCAF8-203ENST00000417268 DOLKQ9UPQ8 538 aa13.03□□□□□ -0.32
SCAF8-203ENST00000417268 RHOBTB1O94844 696 aa13.03□□□□□ -0.32
SCAF8-203ENST00000417268 WDR47O94967 919 aa13.03□□□□□ -0.32
SCAF8-203ENST00000417268 TYMPP19971 482 aa13.03□□□□□ -0.32
SCAF8-203ENST00000417268 IRF5Q13568 498 aa13.03□□□□□ -0.32
SCAF8-203ENST00000417268 SDHAF4Q5VUM1 108 aa13.03□□□□□ -0.32
SCAF8-203ENST00000417268 UGT3A1Q6NUS8 523 aa13.03□□□□□ -0.32
SCAF8-203ENST00000417268 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP13.03□□□□□ -0.32
SCAF8-203ENST00000417268 ATAD1Q8NBU5 361 aa13.03□□□□□ -0.32
SCAF8-203ENST00000417268 CSGALNACT1Q8TDX6 532 aa13.03□□□□□ -0.32
SCAF8-203ENST00000417268 PXYLP1Q8TE99 480 aa13.03□□□□□ -0.32
SCAF8-203ENST00000417268 ZCWPW1Q9H0M4 648 aa13.03□□□□□ -0.32
SCAF8-203ENST00000417268 MMADHCQ9H3L0 296 aaPredicted RBP13.03□□□□□ -0.32
SCAF8-203ENST00000417268 CYLDQ9NQC7 956 aa13.03□□□□□ -0.32
SCAF8-203ENST00000417268 CAMSAP3Q9P1Y5 1249 aaPredicted RBP13.03□□□□□ -0.32
SCAF8-203ENST00000417268 STXBP5LQ9Y2K9 1186 aa13.03□□□□□ -0.32
SCAF8-203ENST00000417268 MAGEB16A2A368 324 aa13.02□□□□□ -0.32
SCAF8-203ENST00000417268 RNF103O00237 685 aa13.02□□□□□ -0.32
SCAF8-203ENST00000417268 USP1O94782 785 aa13.02□□□□□ -0.32
SCAF8-203ENST00000417268 OCM2P0CE71 109 aa13.02□□□□□ -0.32
SCAF8-203ENST00000417268 OCMP0CE72 109 aaPredicted RBP13.02□□□□□ -0.32
SCAF8-203ENST00000417268 ITGALP20701 1170 aa13.02□□□□□ -0.32
SCAF8-203ENST00000417268 PSMA4P25789 261 aaKnown RBP13.02□□□□□ -0.32
SCAF8-203ENST00000417268 FLT3P36888 993 aa13.02□□□□□ -0.32
SCAF8-203ENST00000417268 NUMBP49757 651 aa13.02□□□□□ -0.32
SCAF8-203ENST00000417268 RPL7AP62424 266 aaKnown RBP13.02□□□□□ -0.32
SCAF8-203ENST00000417268 SMAD3P84022 425 aaKnown RBP13.02□□□□□ -0.32
SCAF8-203ENST00000417268 CDH17Q12864 832 aa13.02□□□□□ -0.32
SCAF8-203ENST00000417268 PLPP4Q5VZY2 271 aa13.02□□□□□ -0.32
SCAF8-203ENST00000417268 PSRC1Q6PGN9 363 aaPredicted RBP13.02□□□□□ -0.32
SCAF8-203ENST00000417268 SGF29Q96ES7 293 aa13.02□□□□□ -0.32
SCAF8-203ENST00000417268 RMND5BQ96G75 393 aaPredicted RBP13.02□□□□□ -0.32
SCAF8-203ENST00000417268 UBE2OQ9C0C9 1292 aaKnown RBP13.02□□□□□ -0.32
SCAF8-203ENST00000417268 MYH13Q9UKX3 1938 aa13.02□□□□□ -0.32
SCAF8-203ENST00000417268 C1orf232A0A0U1RR37 186 aa13.02□□□□□ -0.32
SCAF8-203ENST00000417268 PTK2BQ14289 1009 aa13.02□□□□□ -0.32
SCAF8-203ENST00000417268 RNF220Q5VTB9 566 aa13.02□□□□□ -0.32
SCAF8-203ENST00000417268 CCDC81Q6ZN84 652 aa13.02□□□□□ -0.32
SCAF8-203ENST00000417268 SNX19Q92543 992 aa13.02□□□□□ -0.32
SCAF8-203ENST00000417268 LRMDAQ9H2I8 198 aa13.02□□□□□ -0.32
SCAF8-203ENST00000417268 TLE6Q9H808 572 aa13.02□□□□□ -0.32
SCAF8-203ENST00000417268 A0A0U1RQF3 1178 aa13.02□□□□□ -0.33
SCAF8-203ENST00000417268 DNALI1O14645 258 aaPredicted RBP13.02□□□□□ -0.33
SCAF8-203ENST00000417268 PMM2O15305 246 aa13.02□□□□□ -0.33
SCAF8-203ENST00000417268 PTPN20Q4JDL3 420 aa13.02□□□□□ -0.33
SCAF8-203ENST00000417268 RAP1GAP2Q684P5 730 aa13.02□□□□□ -0.33
SCAF8-203ENST00000417268 CWF19L1Q69YN2 538 aaKnown RBP13.02□□□□□ -0.33
SCAF8-203ENST00000417268 HS6ST3Q8IZP7 471 aa13.02□□□□□ -0.33
SCAF8-203ENST00000417268 UNC93B1Q9H1C4 597 aa13.02□□□□□ -0.33
SCAF8-203ENST00000417268 SLCO1B3Q9NPD5 702 aa13.02□□□□□ -0.33
SCAF8-203ENST00000417268 CHST7Q9NS84 486 aa13.02□□□□□ -0.33
SCAF8-203ENST00000417268 DCDC2Q9UHG0 476 aa13.02□□□□□ -0.33
SCAF8-203ENST00000417268 A0A1W2PQ45 241 aaPredicted RBP13.02□□□□□ -0.33
SCAF8-203ENST00000417268 A0A1W2PQY0 241 aa13.02□□□□□ -0.33
SCAF8-203ENST00000417268 ZNF839A8K0R7 811 aa13.02□□□□□ -0.33
SCAF8-203ENST00000417268 RBAK-RBAKDNI3L0D1 243 aa13.02□□□□□ -0.33
SCAF8-203ENST00000417268 TIMM44O43615 452 aa13.02□□□□□ -0.33
SCAF8-203ENST00000417268 MYO1DO94832 1006 aa13.02□□□□□ -0.33
SCAF8-203ENST00000417268 IGSF6O95976 241 aa13.02□□□□□ -0.33
SCAF8-203ENST00000417268 ATXN8OSP0DMR3 200 aa13.02□□□□□ -0.33
SCAF8-203ENST00000417268 COL6A1P12109 1028 aa13.02□□□□□ -0.33
SCAF8-203ENST00000417268 VEGFBP49765 207 aa13.02□□□□□ -0.33
SCAF8-203ENST00000417268 BLMHQ13867 455 aa13.02□□□□□ -0.33
SCAF8-203ENST00000417268 DMC1Q14565 340 aa13.02□□□□□ -0.33
SCAF8-203ENST00000417268 AASDHQ4L235 1098 aaPredicted RBP13.02□□□□□ -0.33
SCAF8-203ENST00000417268 BRMS1LQ5PSV4 323 aa13.02□□□□□ -0.33
SCAF8-203ENST00000417268 CDCA2Q69YH5 1023 aaPredicted RBP13.02□□□□□ -0.33
SCAF8-203ENST00000417268 DSG4Q86SJ6 1040 aa13.02□□□□□ -0.33
SCAF8-203ENST00000417268 LRRC49Q8IUZ0 686 aa13.02□□□□□ -0.33
SCAF8-203ENST00000417268 TBC1D19Q8N5T2 526 aa13.02□□□□□ -0.33
SCAF8-203ENST00000417268 RFWD2Q8NHY2 731 aa13.02□□□□□ -0.33
SCAF8-203ENST00000417268 DIS3LQ8TF46 1054 aaKnown RBP13.02□□□□□ -0.33
SCAF8-203ENST00000417268 EMID1Q96A84 441 aaPredicted RBP13.02□□□□□ -0.33
SCAF8-203ENST00000417268 MINDY3Q9H8M7 445 aa13.02□□□□□ -0.33
SCAF8-203ENST00000417268 COG4Q9H9E3 785 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms