RNA–Protein interactions for RNA: ENST00000415891.5

CLIP4-205, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

TSL 5

Gene CLIP4, Length 2,269 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-205ENST00000415891 FBXL6Q8N531 539 aa6.84□□□□□ -1.31
CLIP4-205ENST00000415891 KDF1Q8NAX2 398 aaPredicted RBP6.84□□□□□ -1.31
CLIP4-205ENST00000415891 MLKLQ8NB16 471 aa6.84□□□□□ -1.31
CLIP4-205ENST00000415891 FAM13CQ8NE31 585 aa6.84□□□□□ -1.31
CLIP4-205ENST00000415891 ZSWIM2Q8NEG5 633 aa6.84□□□□□ -1.31
CLIP4-205ENST00000415891 BBS1Q8NFJ9 593 aa6.84□□□□□ -1.31
CLIP4-205ENST00000415891 DTD1Q8TEA8 209 aa6.84□□□□□ -1.31
CLIP4-205ENST00000415891 RASSF5Q8WWW0 418 aa6.84□□□□□ -1.31
CLIP4-205ENST00000415891 HTR3CQ8WXA8 447 aa6.84□□□□□ -1.31
CLIP4-205ENST00000415891 PDLIM5Q96HC4 596 aaKnown RBP6.84□□□□□ -1.31
CLIP4-205ENST00000415891 FUBP3Q96I24 572 aaKnown RBP eCLIP6.84□□□□□ -1.31
CLIP4-205ENST00000415891 NEURL2Q9BR09 285 aa6.84□□□□□ -1.31
CLIP4-205ENST00000415891 EFHD1Q9BUP0 239 aa6.84□□□□□ -1.31
CLIP4-205ENST00000415891 FTOQ9C0B1 505 aaKnown RBP eCLIP6.84□□□□□ -1.31
CLIP4-205ENST00000415891 NIF3L1Q9GZT8 377 aa6.84□□□□□ -1.31
CLIP4-205ENST00000415891 TMEM60Q9H2L4 133 aa6.84□□□□□ -1.31
CLIP4-205ENST00000415891 SH2D4AQ9H788 454 aa6.84□□□□□ -1.31
CLIP4-205ENST00000415891 JMJD4Q9H9V9 463 aa6.84□□□□□ -1.31
CLIP4-205ENST00000415891 KCNK12Q9HB15 430 aa6.84□□□□□ -1.31
CLIP4-205ENST00000415891 TMEM184CQ9NVA4 438 aa6.84□□□□□ -1.31
CLIP4-205ENST00000415891 SCOCQ9UIL1 159 aa6.84□□□□□ -1.31
CLIP4-205ENST00000415891 EIF3LQ9Y262 564 aaKnown RBP6.84□□□□□ -1.31
CLIP4-205ENST00000415891 TDRKHQ9Y2W6 561 aaKnown RBP6.84□□□□□ -1.31
CLIP4-205ENST00000415891 MRPS2Q9Y399 296 aaKnown RBP6.84□□□□□ -1.31
CLIP4-205ENST00000415891 CLCA3PQ9Y6N3 262 aa6.84□□□□□ -1.31
CLIP4-205ENST00000415891 SHROOM2Q13796 1616 aa6.83□□□□□ -1.32
CLIP4-205ENST00000415891 KDM3AQ9Y4C1 1321 aa6.83□□□□□ -1.32
CLIP4-205ENST00000415891 RNF103-CHMP3A0A140T963 221 aa6.83□□□□□ -1.32
CLIP4-205ENST00000415891 ATP5J2-PTCD1G3V325 749 aa6.83□□□□□ -1.32
CLIP4-205ENST00000415891 J3QW42 95 aa6.83□□□□□ -1.32
CLIP4-205ENST00000415891 RNF103O00237 685 aa6.83□□□□□ -1.32
CLIP4-205ENST00000415891 PGRMC2O15173 223 aa6.83□□□□□ -1.32
CLIP4-205ENST00000415891 SLC22A1O15245 554 aa6.83□□□□□ -1.32
CLIP4-205ENST00000415891 DAPK3O43293 454 aa6.83□□□□□ -1.32
CLIP4-205ENST00000415891 GALR2O43603 387 aaPredicted RBP6.83□□□□□ -1.32
CLIP4-205ENST00000415891 NUDT21O43809 227 aaKnown RBP6.83□□□□□ -1.32
CLIP4-205ENST00000415891 MAGEC1O60732 1142 aa6.83□□□□□ -1.32
CLIP4-205ENST00000415891 TOM1L1O75674 476 aa6.83□□□□□ -1.32
CLIP4-205ENST00000415891 TMEM63AO94886 807 aa6.83□□□□□ -1.32
CLIP4-205ENST00000415891 UPP2O95045 317 aa6.83□□□□□ -1.32
CLIP4-205ENST00000415891 SPDEFO95238 335 aa6.83□□□□□ -1.32
CLIP4-205ENST00000415891 NSA2O95478 260 aaKnown RBP6.83□□□□□ -1.32
CLIP4-205ENST00000415891 MT-CO1P00395 513 aa6.83□□□□□ -1.32
CLIP4-205ENST00000415891 PLEKP08567 350 aaPredicted RBP6.83□□□□□ -1.32
CLIP4-205ENST00000415891 HBQ1P09105 142 aa6.83□□□□□ -1.32
CLIP4-205ENST00000415891 CNPP09543 421 aaKnown RBP6.83□□□□□ -1.32
CLIP4-205ENST00000415891 CHMP24386 653 aa6.83□□□□□ -1.32
CLIP4-205ENST00000415891 GRK3P35626 688 aa6.83□□□□□ -1.32
CLIP4-205ENST00000415891 CAPZA2P47755 286 aa6.83□□□□□ -1.32
CLIP4-205ENST00000415891 ANXA11P50995 505 aaKnown RBP6.83□□□□□ -1.32
CLIP4-205ENST00000415891 GALK1P51570 392 aa6.83□□□□□ -1.32
CLIP4-205ENST00000415891 YWHAHQ04917 246 aaPredicted RBP6.83□□□□□ -1.32
CLIP4-205ENST00000415891 IL24Q13007 206 aa6.83□□□□□ -1.32
CLIP4-205ENST00000415891 PAK1Q13153 545 aa6.83□□□□□ -1.32
CLIP4-205ENST00000415891 NAB1Q13506 487 aa6.83□□□□□ -1.32
CLIP4-205ENST00000415891 COL9A2Q14055 689 aaPredicted RBP6.83□□□□□ -1.32
CLIP4-205ENST00000415891 ZNF267Q14586 743 aaPredicted RBP6.83□□□□□ -1.32
CLIP4-205ENST00000415891 CLCA4Q14CN2 919 aa6.83□□□□□ -1.32
CLIP4-205ENST00000415891 PAGE2BQ5JRK9 111 aa6.83□□□□□ -1.32
CLIP4-205ENST00000415891 PXDC1Q5TGL8 231 aa6.83□□□□□ -1.32
CLIP4-205ENST00000415891 KRT79Q5XKE5 535 aa6.83□□□□□ -1.32
CLIP4-205ENST00000415891 ZNF385CQ66K41 422 aaPredicted RBP6.83□□□□□ -1.32
CLIP4-205ENST00000415891 INTS5Q6P9B9 1019 aaKnown RBP6.83□□□□□ -1.32
CLIP4-205ENST00000415891 C6orf15Q6UXA7 325 aaPredicted RBP6.83□□□□□ -1.32
CLIP4-205ENST00000415891 ETV3LQ6ZN32 361 aa6.83□□□□□ -1.32
CLIP4-205ENST00000415891 RRAGAQ7L523 313 aa6.83□□□□□ -1.32
CLIP4-205ENST00000415891 FAM131BQ86XD5 332 aa6.83□□□□□ -1.32
CLIP4-205ENST00000415891 TBC1D10CQ8IV04 446 aa6.83□□□□□ -1.32
CLIP4-205ENST00000415891 CPOQ8IVL8 374 aa6.83□□□□□ -1.32
CLIP4-205ENST00000415891 CACNA2D3Q8IZS8 1091 aa6.83□□□□□ -1.32
CLIP4-205ENST00000415891 SLC2A14Q8TDB8 520 aa6.83□□□□□ -1.32
CLIP4-205ENST00000415891 TGFBRAP1Q8WUH2 860 aa6.83□□□□□ -1.32
CLIP4-205ENST00000415891 AKAP1Q92667 903 aaKnown RBP eCLIP6.83□□□□□ -1.32
CLIP4-205ENST00000415891 P3H4Q92791 437 aa6.83□□□□□ -1.32
CLIP4-205ENST00000415891 KIF12Q96FN5 646 aa6.83□□□□□ -1.32
CLIP4-205ENST00000415891 C7orf26Q96N11 449 aa6.83□□□□□ -1.32
CLIP4-205ENST00000415891 FAM129BQ96TA1 746 aa6.83□□□□□ -1.32
CLIP4-205ENST00000415891 CNPY3Q9BT09 278 aa6.83□□□□□ -1.32
CLIP4-205ENST00000415891 DSCC1Q9BVC3 393 aa6.83□□□□□ -1.32
CLIP4-205ENST00000415891 SORBS1Q9BX66 1292 aaKnown RBP6.83□□□□□ -1.32
CLIP4-205ENST00000415891 KLC2Q9H0B6 622 aa6.83□□□□□ -1.32
CLIP4-205ENST00000415891 SELENONQ9NZV5 590 aa6.83□□□□□ -1.32
CLIP4-205ENST00000415891 FAM198AQ9UFP1 575 aa6.83□□□□□ -1.32
CLIP4-205ENST00000415891 AP4E1Q9UPM8 1137 aa6.83□□□□□ -1.32
CLIP4-205ENST00000415891 RNF24Q9Y225 148 aa6.83□□□□□ -1.32
CLIP4-205ENST00000415891 ACOT9Q9Y305 439 aa6.83□□□□□ -1.32
CLIP4-205ENST00000415891 TARBP1Q13395 1621 aaKnown RBP6.83□□□□□ -1.32
CLIP4-205ENST00000415891 ZNF521Q96K83 1311 aa6.83□□□□□ -1.32
CLIP4-205ENST00000415891 MEX3AA1L020 520 aaKnown RBP6.83□□□□□ -1.32
CLIP4-205ENST00000415891 NUTM2BA6NNL0 878 aaPredicted RBP6.83□□□□□ -1.32
CLIP4-205ENST00000415891 C2orf74A8MZ97 194 aa6.83□□□□□ -1.32
CLIP4-205ENST00000415891 NUTM2EB1AL46 878 aaPredicted RBP6.83□□□□□ -1.32
CLIP4-205ENST00000415891 F6X3S4 739 aa6.83□□□□□ -1.32
CLIP4-205ENST00000415891 TERTO14746 1132 aaKnown RBP6.83□□□□□ -1.32
CLIP4-205ENST00000415891 KIAA0355O15063 1070 aa6.83□□□□□ -1.32
CLIP4-205ENST00000415891 KIAA0391O15091 583 aaKnown RBP6.83□□□□□ -1.32
CLIP4-205ENST00000415891 ANGPT2O15123 496 aa6.83□□□□□ -1.32
CLIP4-205ENST00000415891 MATN3O15232 486 aa6.83□□□□□ -1.32
CLIP4-205ENST00000415891 SCO2O43819 266 aa6.83□□□□□ -1.32
CLIP4-205ENST00000415891 DKK1O94907 266 aa6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms