RNA–Protein interactions for RNA: ENST00000414879.5

PTPRF-205, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 2

Gene PTPRF, Length 4,836 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-205ENST00000414879 AIM2O14862 343 aa12.16□□□□□ -0.46
PTPRF-205ENST00000414879 L1CAMP32004 1257 aa12.16□□□□□ -0.46
PTPRF-205ENST00000414879 CCNG1P51959 295 aa12.16□□□□□ -0.46
PTPRF-205ENST00000414879 LILRA4P59901 499 aa12.16□□□□□ -0.46
PTPRF-205ENST00000414879 IL2P60568 153 aa12.16□□□□□ -0.46
PTPRF-205ENST00000414879 SMAD3P84022 425 aaKnown RBP12.16□□□□□ -0.46
PTPRF-205ENST00000414879 CRHR2Q13324 411 aa12.16□□□□□ -0.46
PTPRF-205ENST00000414879 FBXL19Q6PCT2 694 aa12.16□□□□□ -0.46
PTPRF-205ENST00000414879 ZNF438Q7Z4V0 828 aa12.16□□□□□ -0.46
PTPRF-205ENST00000414879 STAG3L4Q8TBR4 150 aa12.16□□□□□ -0.46
PTPRF-205ENST00000414879 ZNF398Q8TD17 642 aa12.16□□□□□ -0.46
PTPRF-205ENST00000414879 TTYH3Q9C0H2 523 aa12.16□□□□□ -0.46
PTPRF-205ENST00000414879 ACTR8Q9H981 624 aa12.16□□□□□ -0.46
PTPRF-205ENST00000414879 SPATS2LQ9NUQ6 558 aaKnown RBP12.16□□□□□ -0.46
PTPRF-205ENST00000414879 HEY2Q9UBP5 337 aa12.16□□□□□ -0.46
PTPRF-205ENST00000414879 TAGLN3Q9UI15 199 aa12.16□□□□□ -0.46
PTPRF-205ENST00000414879 BCLAF3A2AJT9 711 aaKnown RBP12.16□□□□□ -0.46
PTPRF-205ENST00000414879 PCDH8O95206 1070 aa12.16□□□□□ -0.46
PTPRF-205ENST00000414879 STAU1O95793 577 aaKnown RBP12.16□□□□□ -0.46
PTPRF-205ENST00000414879 FCGR1AP12314 374 aa12.16□□□□□ -0.46
PTPRF-205ENST00000414879 OR1D2P34982 312 aa12.16□□□□□ -0.46
PTPRF-205ENST00000414879 HIRAP54198 1017 aaPredicted RBP12.16□□□□□ -0.46
PTPRF-205ENST00000414879 PHKG1Q16816 387 aa12.16□□□□□ -0.46
PTPRF-205ENST00000414879 CERS2Q96G23 380 aa12.16□□□□□ -0.46
PTPRF-205ENST00000414879 EBNA1BP2Q99848 306 aaKnown RBP12.16□□□□□ -0.46
PTPRF-205ENST00000414879 FAM126AQ9BYI3 521 aaPredicted RBP12.16□□□□□ -0.46
PTPRF-205ENST00000414879 MMADHCQ9H3L0 296 aaPredicted RBP12.16□□□□□ -0.46
PTPRF-205ENST00000414879 PTPRJQ12913 1337 aa12.16□□□□□ -0.46
PTPRF-205ENST00000414879 ALOX15BO15296 676 aa12.16□□□□□ -0.46
PTPRF-205ENST00000414879 ZBTB14O43829 449 aa12.16□□□□□ -0.46
PTPRF-205ENST00000414879 MAGEC1O60732 1142 aa12.16□□□□□ -0.46
PTPRF-205ENST00000414879 GUCY1B2O75343 617 aa12.16□□□□□ -0.46
PTPRF-205ENST00000414879 NOL4O94818 638 aa12.16□□□□□ -0.46
PTPRF-205ENST00000414879 PEX5P50542 639 aa12.16□□□□□ -0.46
PTPRF-205ENST00000414879 ATP6V0D1P61421 351 aa12.16□□□□□ -0.46
PTPRF-205ENST00000414879 COL9A3Q14050 684 aaPredicted RBP12.16□□□□□ -0.46
PTPRF-205ENST00000414879 INSCQ1MX18 579 aa12.16□□□□□ -0.46
PTPRF-205ENST00000414879 PAGE2BQ5JRK9 111 aa12.16□□□□□ -0.46
PTPRF-205ENST00000414879 N4BP2L1Q5TBK1 243 aaPredicted RBP12.16□□□□□ -0.46
PTPRF-205ENST00000414879 LRRC8BQ6P9F7 803 aa12.16□□□□□ -0.46
PTPRF-205ENST00000414879 PSRC1Q6PGN9 363 aaPredicted RBP12.16□□□□□ -0.46
PTPRF-205ENST00000414879 DRICH1Q6PGQ1 229 aaPredicted RBP12.16□□□□□ -0.46
PTPRF-205ENST00000414879 ARCQ7LC44 396 aa12.16□□□□□ -0.46
PTPRF-205ENST00000414879 TEPSINQ96N21 525 aa12.16□□□□□ -0.46
PTPRF-205ENST00000414879 THTPAQ9BU02 230 aa12.16□□□□□ -0.46
PTPRF-205ENST00000414879 GPR88Q9GZN0 384 aa12.16□□□□□ -0.46
PTPRF-205ENST00000414879 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP12.16□□□□□ -0.463e-11■□□□□ 10
PTPRF-205ENST00000414879 DNAJC16Q9Y2G8 782 aa12.16□□□□□ -0.46
PTPRF-205ENST00000414879 ARVCFO00192 962 aa12.16□□□□□ -0.46
PTPRF-205ENST00000414879 GJB1P08034 283 aa12.16□□□□□ -0.46
PTPRF-205ENST00000414879 CXCR2P25025 360 aa12.16□□□□□ -0.46
PTPRF-205ENST00000414879 SLC20A2Q08357 652 aa12.16□□□□□ -0.46
PTPRF-205ENST00000414879 SETMARQ53H47 684 aaPredicted RBP12.16□□□□□ -0.46
PTPRF-205ENST00000414879 FUT10Q6P4F1 479 aa12.16□□□□□ -0.46
PTPRF-205ENST00000414879 FAM162AQ96A26 154 aa12.16□□□□□ -0.46
PTPRF-205ENST00000414879 PLD4Q96BZ4 506 aa12.16□□□□□ -0.46
PTPRF-205ENST00000414879 SGF29Q96ES7 293 aa12.16□□□□□ -0.46
PTPRF-205ENST00000414879 C17orf80Q9BSJ5 609 aa12.16□□□□□ -0.46
PTPRF-205ENST00000414879 RAD21L1Q9H4I0 556 aa12.16□□□□□ -0.46
PTPRF-205ENST00000414879 KRCC1Q9NPI7 259 aaPredicted RBP12.16□□□□□ -0.46
PTPRF-205ENST00000414879 A0A088AWK7 358 aa12.15□□□□□ -0.46
PTPRF-205ENST00000414879 ZNF10P21506 573 aaPredicted RBP12.15□□□□□ -0.46
PTPRF-205ENST00000414879 TDRD5Q8NAT2 981 aaKnown RBP12.15□□□□□ -0.46
PTPRF-205ENST00000414879 ACSS3Q9H6R3 686 aa12.15□□□□□ -0.46
PTPRF-205ENST00000414879 AURKCQ9UQB9 309 aa12.15□□□□□ -0.46
PTPRF-205ENST00000414879 NHSQ6T4R5 1651 aa12.15□□□□□ -0.46
PTPRF-205ENST00000414879 PALM2-AKAP2B1ALY0 433 aaPredicted RBP12.15□□□□□ -0.46
PTPRF-205ENST00000414879 RPSAP08865 295 aaKnown RBP12.15□□□□□ -0.46
PTPRF-205ENST00000414879 BRCC3P46736 316 aa12.15□□□□□ -0.46
PTPRF-205ENST00000414879 PRKCZQ05513 592 aa12.15□□□□□ -0.46
PTPRF-205ENST00000414879 CNGA3Q16281 694 aa12.15□□□□□ -0.46
PTPRF-205ENST00000414879 C12orf50Q8NA57 414 aaPredicted RBP12.15□□□□□ -0.46
PTPRF-205ENST00000414879 EMID1Q96A84 441 aaPredicted RBP12.15□□□□□ -0.46
PTPRF-205ENST00000414879 FCRL2Q96LA5 508 aaPredicted RBP12.15□□□□□ -0.46
PTPRF-205ENST00000414879 CORO1BQ9BR76 489 aa12.15□□□□□ -0.46
PTPRF-205ENST00000414879 RXFP1Q9HBX9 757 aa12.15□□□□□ -0.46
PTPRF-205ENST00000414879 UBP1Q9NZI7 540 aa12.15□□□□□ -0.46
PTPRF-205ENST00000414879 RBM47A0AV96 593 aaKnown RBP12.15□□□□□ -0.46
PTPRF-205ENST00000414879 MGAT4DA6NG13 374 aa12.15□□□□□ -0.46
PTPRF-205ENST00000414879 UBDO15205 165 aa12.15□□□□□ -0.46
PTPRF-205ENST00000414879 PSMB4P28070 264 aa12.15□□□□□ -0.46
PTPRF-205ENST00000414879 RPL7AP62424 266 aaKnown RBP12.15□□□□□ -0.46
PTPRF-205ENST00000414879 MKRN4PQ13434 485 aaPredicted RBP12.15□□□□□ -0.46
PTPRF-205ENST00000414879 SLC10A6Q3KNW5 377 aa12.15□□□□□ -0.46
PTPRF-205ENST00000414879 WLSQ5T9L3 541 aa12.15□□□□□ -0.46
PTPRF-205ENST00000414879 BBS7Q8IWZ6 715 aa12.15□□□□□ -0.46
PTPRF-205ENST00000414879 PHACTR4Q8IZ21 702 aa12.15□□□□□ -0.46
PTPRF-205ENST00000414879 ADAM33Q9BZ11 813 aa12.15□□□□□ -0.46
PTPRF-205ENST00000414879 ABHD14A-ACY1A0A1B0GW23 586 aa12.14□□□□□ -0.47
PTPRF-205ENST00000414879 ARL5CA6NH57 179 aa12.14□□□□□ -0.47
PTPRF-205ENST00000414879 GRM6O15303 877 aa12.14□□□□□ -0.47
PTPRF-205ENST00000414879 TBC1D4O60343 1298 aa12.14□□□□□ -0.47
PTPRF-205ENST00000414879 F2P00734 622 aa12.14□□□□□ -0.47
PTPRF-205ENST00000414879 FTH1P02794 183 aa12.14□□□□□ -0.47
PTPRF-205ENST00000414879 LTA4HP09960 611 aaKnown RBP12.14□□□□□ -0.47
PTPRF-205ENST00000414879 LPOP22079 712 aaPredicted RBP12.14□□□□□ -0.47
PTPRF-205ENST00000414879 CCNCP24863 283 aa12.14□□□□□ -0.47
PTPRF-205ENST00000414879 PSMA4P25789 261 aaKnown RBP12.14□□□□□ -0.47
PTPRF-205ENST00000414879 SEC24CP53992 1094 aa12.14□□□□□ -0.47
PTPRF-205ENST00000414879 OCA2Q04671 838 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms