RNA–Protein interactions for RNA: ENST00000413593.5

TMEM248-202, Transcript of transmembrane protein 248, humanhuman

TSL 4

Gene TMEM248, Length 637 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM248-202ENST00000413593 DEF6Q9H4E7 631 aa10.32□□□□□ -0.76
TMEM248-202ENST00000413593 ATP13A1Q9HD20 1204 aa10.32□□□□□ -0.76
TMEM248-202ENST00000413593 WSB2Q9NYS7 404 aaPredicted RBP10.32□□□□□ -0.76
TMEM248-202ENST00000413593 PCSK1NQ9UHG2 260 aa10.32□□□□□ -0.76
TMEM248-202ENST00000413593 USP18Q9UMW8 372 aa10.32□□□□□ -0.76
TMEM248-202ENST00000413593 AP4E1Q9UPM8 1137 aa10.32□□□□□ -0.76
TMEM248-202ENST00000413593 DMDP11532 3685 aa10.32□□□□□ -0.76
TMEM248-202ENST00000413593 WDR87Q6ZQQ6 2873 aa10.32□□□□□ -0.76
TMEM248-202ENST00000413593 WASH4PA8MWX3 477 aa10.31□□□□□ -0.76
TMEM248-202ENST00000413593 EIF3CLB5ME19 914 aaKnown RBP10.31□□□□□ -0.76
TMEM248-202ENST00000413593 K7ERQ8 282 aa10.31□□□□□ -0.76
TMEM248-202ENST00000413593 CBX4O00257 560 aa10.31□□□□□ -0.76
TMEM248-202ENST00000413593 RNASEH1O60930 286 aaKnown RBP10.31□□□□□ -0.76
TMEM248-202ENST00000413593 DNTTP04053 509 aa10.31□□□□□ -0.76
TMEM248-202ENST00000413593 SRCP12931 536 aa10.31□□□□□ -0.76
TMEM248-202ENST00000413593 GLDCP23378 1020 aa10.31□□□□□ -0.76
TMEM248-202ENST00000413593 OXTRP30559 389 aa10.31□□□□□ -0.76
TMEM248-202ENST00000413593 HTR7P34969 479 aa10.31□□□□□ -0.76
TMEM248-202ENST00000413593 ACVRL1P37023 503 aa10.31□□□□□ -0.76
TMEM248-202ENST00000413593 ETFBP38117 255 aa10.31□□□□□ -0.76
TMEM248-202ENST00000413593 TPI1P60174 286 aa10.31□□□□□ -0.76
TMEM248-202ENST00000413593 ZNF33AQ06730 810 aa10.31□□□□□ -0.76
TMEM248-202ENST00000413593 PDAP1Q13442 181 aaKnown RBP10.31□□□□□ -0.76
TMEM248-202ENST00000413593 PIGHQ14442 188 aaPredicted RBP10.31□□□□□ -0.76
TMEM248-202ENST00000413593 ELAVL3Q14576 367 aaKnown RBP10.31□□□□□ -0.76
TMEM248-202ENST00000413593 CCDC6Q16204 474 aa10.31□□□□□ -0.76
TMEM248-202ENST00000413593 TTC31Q49AM3 519 aaPredicted RBP10.31□□□□□ -0.76
TMEM248-202ENST00000413593 ACCSLQ4AC99 568 aa10.31□□□□□ -0.76
TMEM248-202ENST00000413593 PLA2G2CQ5R387 149 aa10.31□□□□□ -0.76
TMEM248-202ENST00000413593 ERMARDQ5T6L9 678 aa10.31□□□□□ -0.76
TMEM248-202ENST00000413593 DAB2IPQ5VWQ8 1189 aa10.31□□□□□ -0.76
TMEM248-202ENST00000413593 LYSMD4Q5XG99 296 aa10.31□□□□□ -0.76
TMEM248-202ENST00000413593 RETSATQ6NUM9 610 aa10.31□□□□□ -0.76
TMEM248-202ENST00000413593 LINGO4Q6UY18 593 aa10.31□□□□□ -0.76
TMEM248-202ENST00000413593 ARMCX6Q7L4S7 300 aa10.31□□□□□ -0.76
TMEM248-202ENST00000413593 CYP2U1Q7Z449 544 aa10.31□□□□□ -0.76
TMEM248-202ENST00000413593 PSTKQ8IV42 348 aaKnown RBP10.31□□□□□ -0.76
TMEM248-202ENST00000413593 STK40Q8N2I9 435 aa10.31□□□□□ -0.76
TMEM248-202ENST00000413593 NIPA2Q8N8Q9 360 aa10.31□□□□□ -0.76
TMEM248-202ENST00000413593 TC2NQ8N9U0 490 aa10.31□□□□□ -0.76
TMEM248-202ENST00000413593 ZNF564Q8TBZ8 553 aaPredicted RBP10.31□□□□□ -0.76
TMEM248-202ENST00000413593 CTNNBL1Q8WYA6 563 aaPredicted RBP10.31□□□□□ -0.76
TMEM248-202ENST00000413593 SLC39A7Q92504 469 aa10.31□□□□□ -0.76
TMEM248-202ENST00000413593 ARHGEF2Q92974 986 aaKnown RBP10.31□□□□□ -0.76
TMEM248-202ENST00000413593 TOE1Q96GM8 510 aaKnown RBP10.31□□□□□ -0.76
TMEM248-202ENST00000413593 BTBD6Q96KE9 485 aa10.31□□□□□ -0.76
TMEM248-202ENST00000413593 CCDC42Q96M95 316 aa10.31□□□□□ -0.76
TMEM248-202ENST00000413593 FAM129BQ96TA1 746 aa10.31□□□□□ -0.76
TMEM248-202ENST00000413593 EIF3CQ99613 913 aaKnown RBP10.31□□□□□ -0.76
TMEM248-202ENST00000413593 ACE2Q9BYF1 805 aaPredicted RBP10.31□□□□□ -0.76
TMEM248-202ENST00000413593 MAGEH1Q9H213 219 aa10.31□□□□□ -0.76
TMEM248-202ENST00000413593 PABPC3Q9H361 631 aaKnown RBP10.31□□□□□ -0.76
TMEM248-202ENST00000413593 DHX35Q9H5Z1 703 aaKnown RBP10.31□□□□□ -0.76
TMEM248-202ENST00000413593 NHEJ1Q9H9Q4 299 aaPredicted RBP10.31□□□□□ -0.76
TMEM248-202ENST00000413593 SPTLC3Q9NUV7 552 aa10.31□□□□□ -0.76
TMEM248-202ENST00000413593 CTTNBP2NLQ9P2B4 639 aa10.31□□□□□ -0.76
TMEM248-202ENST00000413593 IP6K2Q9UHH9 426 aa10.31□□□□□ -0.76
TMEM248-202ENST00000413593 DNAI1Q9UI46 699 aa10.31□□□□□ -0.76
TMEM248-202ENST00000413593 ANAPC7Q9UJX3 599 aa10.31□□□□□ -0.76
TMEM248-202ENST00000413593 SCML1Q9UN30 329 aa10.31□□□□□ -0.76
TMEM248-202ENST00000413593 USP34Q70CQ2 3546 aa10.31□□□□□ -0.76
TMEM248-202ENST00000413593 CXorf51AA0A1B0GTR3 108 aa10.3□□□□□ -0.76
TMEM248-202ENST00000413593 MYO1FO00160 1098 aa10.3□□□□□ -0.76
TMEM248-202ENST00000413593 EEF2KO00418 725 aaKnown RBP10.3□□□□□ -0.76
TMEM248-202ENST00000413593 FGF10O15520 208 aaPredicted RBP10.3□□□□□ -0.76
TMEM248-202ENST00000413593 SMAD6O43541 496 aaKnown RBP10.3□□□□□ -0.76
TMEM248-202ENST00000413593 RAMP2O60895 175 aa10.3□□□□□ -0.76
TMEM248-202ENST00000413593 NDUFS2O75306 463 aa10.3□□□□□ -0.76
TMEM248-202ENST00000413593 CD160O95971 181 aa10.3□□□□□ -0.76
TMEM248-202ENST00000413593 H2AFZP0C0S5 128 aa10.3□□□□□ -0.76
TMEM248-202ENST00000413593 TMEM253P0C7T8 217 aa10.3□□□□□ -0.76
TMEM248-202ENST00000413593 ZNF806P0C7X5 589 aa10.3□□□□□ -0.76
TMEM248-202ENST00000413593 TCF4P15884 667 aa10.3□□□□□ -0.76
TMEM248-202ENST00000413593 IL1R2P27930 398 aa10.3□□□□□ -0.76
TMEM248-202ENST00000413593 SERPINH1P50454 418 aaKnown RBP10.3□□□□□ -0.76
TMEM248-202ENST00000413593 ARF5P84085 180 aa10.3□□□□□ -0.76
TMEM248-202ENST00000413593 LMNB2Q03252 620 aa10.3□□□□□ -0.76
TMEM248-202ENST00000413593 POLD3Q15054 466 aaPredicted RBP10.3□□□□□ -0.76
TMEM248-202ENST00000413593 CST6Q15828 149 aa10.3□□□□□ -0.76
TMEM248-202ENST00000413593 BOLA3Q53S33 107 aa10.3□□□□□ -0.76
TMEM248-202ENST00000413593 IL31Q6EBC2 164 aa10.3□□□□□ -0.76
TMEM248-202ENST00000413593 C22orf39Q6P5X5 142 aa10.3□□□□□ -0.76
TMEM248-202ENST00000413593 PRR23CQ6ZRP0 262 aa10.3□□□□□ -0.76
TMEM248-202ENST00000413593 Q6ZVU0 165 aa10.3□□□□□ -0.76
TMEM248-202ENST00000413593 USP30Q70CQ3 517 aa10.3□□□□□ -0.76
TMEM248-202ENST00000413593 H2AFVQ71UI9 128 aa10.3□□□□□ -0.76
TMEM248-202ENST00000413593 FAM124AQ86V42 546 aa10.3□□□□□ -0.76
TMEM248-202ENST00000413593 MMAAQ8IVH4 418 aaKnown RBP10.3□□□□□ -0.76
TMEM248-202ENST00000413593 SLC41A1Q8IVJ1 513 aa10.3□□□□□ -0.76
TMEM248-202ENST00000413593 UMODL1-AS1Q8N2C9 162 aa10.3□□□□□ -0.76
TMEM248-202ENST00000413593 DEFB119Q8N690 84 aa10.3□□□□□ -0.76
TMEM248-202ENST00000413593 ATP11CQ8NB49 1132 aa10.3□□□□□ -0.76
TMEM248-202ENST00000413593 PIGKQ92643 395 aa10.3□□□□□ -0.76
TMEM248-202ENST00000413593 ZNF419Q96HQ0 510 aaPredicted RBP10.3□□□□□ -0.76
TMEM248-202ENST00000413593 HSPA12BQ96MM6 686 aa10.3□□□□□ -0.76
TMEM248-202ENST00000413593 KCTD15Q96SI1 283 aaPredicted RBP10.3□□□□□ -0.76
TMEM248-202ENST00000413593 GPR174Q9BXC1 333 aa10.3□□□□□ -0.76
TMEM248-202ENST00000413593 SMOC1Q9H4F8 434 aa10.3□□□□□ -0.76
TMEM248-202ENST00000413593 NOL6Q9H6R4 1146 aaKnown RBP10.3□□□□□ -0.76
TMEM248-202ENST00000413593 CATSPERBQ9H7T0 1116 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms