RNA–Protein interactions for RNA: ENST00000412570.5

SMPD4-203, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 2

Gene SMPD4, Length 3,601 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-203ENST00000412570 LMNB2Q03252 620 aa9.93□□□□□ -0.82
SMPD4-203ENST00000412570 FAM133BQ5BKY9 247 aaKnown RBP9.93□□□□□ -0.82
SMPD4-203ENST00000412570 TPGS2Q68CL5 300 aa9.93□□□□□ -0.82
SMPD4-203ENST00000412570 EMBQ6PCB8 327 aa9.93□□□□□ -0.82
SMPD4-203ENST00000412570 TRMT10BQ6PF06 316 aaKnown RBP9.93□□□□□ -0.82
SMPD4-203ENST00000412570 POTEHQ6S545 545 aa9.93□□□□□ -0.82
SMPD4-203ENST00000412570 SFTPA1Q8IWL2 248 aa9.93□□□□□ -0.82
SMPD4-203ENST00000412570 TCEAL8Q8IYN2 117 aa9.93□□□□□ -0.82
SMPD4-203ENST00000412570 CNTD1Q8N815 330 aa9.93□□□□□ -0.82
SMPD4-203ENST00000412570 GDAP1Q8TB36 358 aa9.93□□□□□ -0.82
SMPD4-203ENST00000412570 GRIN3AQ8TCU5 1115 aa9.93□□□□□ -0.82
SMPD4-203ENST00000412570 TIFAQ96CG3 184 aa9.93□□□□□ -0.82
SMPD4-203ENST00000412570 RMDN1Q96DB5 314 aa9.93□□□□□ -0.82
SMPD4-203ENST00000412570 IL21Q9HBE4 155 aa9.93□□□□□ -0.82
SMPD4-203ENST00000412570 PCDH9Q9HC56 1237 aa9.93□□□□□ -0.82
SMPD4-203ENST00000412570 BPIFA1Q9NP55 256 aa9.93□□□□□ -0.82
SMPD4-203ENST00000412570 TRAV19A0A0A6YYK7 116 aa9.93□□□□□ -0.82
SMPD4-203ENST00000412570 PRR23AA6NEV1 266 aa9.93□□□□□ -0.82
SMPD4-203ENST00000412570 AGPSO00116 658 aa9.93□□□□□ -0.82
SMPD4-203ENST00000412570 LEFTY2O00292 366 aa9.93□□□□□ -0.82
SMPD4-203ENST00000412570 TP73O15350 636 aa9.93□□□□□ -0.82
SMPD4-203ENST00000412570 F11P03951 625 aa9.93□□□□□ -0.82
SMPD4-203ENST00000412570 CTPS1P17812 591 aa9.93□□□□□ -0.82
SMPD4-203ENST00000412570 SERPINB6P35237 376 aa9.93□□□□□ -0.82
SMPD4-203ENST00000412570 RPL34P49207 117 aaKnown RBP9.93□□□□□ -0.82
SMPD4-203ENST00000412570 CYP1B1Q16678 543 aa9.93□□□□□ -0.82
SMPD4-203ENST00000412570 CCDC149Q6ZUS6 474 aa9.93□□□□□ -0.82
SMPD4-203ENST00000412570 CENPUQ71F23 418 aa9.93□□□□□ -0.82
SMPD4-203ENST00000412570 ZNF572Q7Z3I7 529 aaPredicted RBP9.93□□□□□ -0.82
SMPD4-203ENST00000412570 PPIL6Q8IXY8 311 aa9.93□□□□□ -0.82
SMPD4-203ENST00000412570 ART4Q93070 314 aa9.93□□□□□ -0.82
SMPD4-203ENST00000412570 FERMT1Q9BQL6 677 aa9.93□□□□□ -0.82
SMPD4-203ENST00000412570 CYLDQ9NQC7 956 aa9.93□□□□□ -0.82
SMPD4-203ENST00000412570 ABCB8Q9NUT2 735 aa9.93□□□□□ -0.82
SMPD4-203ENST00000412570 GOLGA6CA6NDK9 693 aa9.92□□□□□ -0.82
SMPD4-203ENST00000412570 GOLGA6DP0CG33 693 aa9.92□□□□□ -0.82
SMPD4-203ENST00000412570 ERVK-10P10266 1014 aa9.92□□□□□ -0.82
SMPD4-203ENST00000412570 CSKP41240 450 aa9.92□□□□□ -0.82
SMPD4-203ENST00000412570 KDSRQ06136 332 aa9.92□□□□□ -0.82
SMPD4-203ENST00000412570 MESP2Q0VG99 397 aa9.92□□□□□ -0.82
SMPD4-203ENST00000412570 RNASEH2BQ5TBB1 312 aaKnown RBP9.92□□□□□ -0.82
SMPD4-203ENST00000412570 PRPF39Q86UA1 669 aaKnown RBP9.92□□□□□ -0.82
SMPD4-203ENST00000412570 FBF1Q8TES7 1133 aa9.92□□□□□ -0.82
SMPD4-203ENST00000412570 PRCCQ92733 491 aaPredicted RBP9.92□□□□□ -0.82
SMPD4-203ENST00000412570 CLP1Q92989 425 aaKnown RBP9.92□□□□□ -0.82
SMPD4-203ENST00000412570 NKD2Q969F2 451 aaPredicted RBP9.92□□□□□ -0.82
SMPD4-203ENST00000412570 SEMA3CQ99985 751 aa9.92□□□□□ -0.82
SMPD4-203ENST00000412570 GOLGA6AQ9NYA3 693 aa9.92□□□□□ -0.82
SMPD4-203ENST00000412570 GTSE1Q9NYZ3 720 aa9.92□□□□□ -0.82
SMPD4-203ENST00000412570 ZC3H7BQ9UGR2 993 aaKnown RBP9.92□□□□□ -0.82
SMPD4-203ENST00000412570 CHKBQ9Y259 395 aa9.92□□□□□ -0.82
SMPD4-203ENST00000412570 MYZAPP0CAP1 466 aa9.92□□□□□ -0.82
SMPD4-203ENST00000412570 SOX9P48436 509 aa9.92□□□□□ -0.82
SMPD4-203ENST00000412570 ARL4CP56559 192 aa9.92□□□□□ -0.82
SMPD4-203ENST00000412570 GSCP56915 257 aaPredicted RBP9.92□□□□□ -0.82
SMPD4-203ENST00000412570 ITIH3Q06033 890 aa9.92□□□□□ -0.82
SMPD4-203ENST00000412570 MARC1Q5VT66 337 aa9.92□□□□□ -0.82
SMPD4-203ENST00000412570 NUGGCQ68CJ6 796 aa9.92□□□□□ -0.82
SMPD4-203ENST00000412570 VN1R2Q8NFZ6 395 aa9.92□□□□□ -0.82
SMPD4-203ENST00000412570 NSMCE1Q8WV22 266 aa9.92□□□□□ -0.82
SMPD4-203ENST00000412570 OXNAD1Q96HP4 312 aaPredicted RBP9.92□□□□□ -0.82
SMPD4-203ENST00000412570 SERPINB12Q96P63 405 aa9.92□□□□□ -0.82
SMPD4-203ENST00000412570 RPP25Q9BUL9 199 aaKnown RBP9.92□□□□□ -0.82
SMPD4-203ENST00000412570 PNPLA8Q9NP80 782 aa9.92□□□□□ -0.82
SMPD4-203ENST00000412570 CHRAC1Q9NRG0 131 aa9.92□□□□□ -0.82
SMPD4-203ENST00000412570 LSM7Q9UK45 103 aaKnown RBP9.92□□□□□ -0.82
SMPD4-203ENST00000412570 KCTD3Q9Y597 815 aa9.92□□□□□ -0.82
SMPD4-203ENST00000412570 TTC28Q96AY4 2481 aa9.92□□□□□ -0.82
SMPD4-203ENST00000412570 MYO16Q9Y6X6 1858 aa9.92□□□□□ -0.82
SMPD4-203ENST00000412570 HSFX4A0A1B0GTS1 333 aaPredicted RBP9.92□□□□□ -0.82
SMPD4-203ENST00000412570 HSFX3A0A1B0GWH4 333 aaPredicted RBP9.92□□□□□ -0.82
SMPD4-203ENST00000412570 RGS16O15492 202 aaPredicted RBP9.92□□□□□ -0.82
SMPD4-203ENST00000412570 GPR39O43194 453 aa9.92□□□□□ -0.82
SMPD4-203ENST00000412570 TOP3BO95985 862 aaKnown RBP9.92□□□□□ -0.82
SMPD4-203ENST00000412570 ZFXP17010 805 aaPredicted RBP9.92□□□□□ -0.82
SMPD4-203ENST00000412570 PTPN2P17706 415 aa9.92□□□□□ -0.82
SMPD4-203ENST00000412570 CD70P32970 193 aa9.92□□□□□ -0.82
SMPD4-203ENST00000412570 RGRP47804 291 aa9.92□□□□□ -0.82
SMPD4-203ENST00000412570 ZNF844Q08AG5 666 aa9.92□□□□□ -0.82
SMPD4-203ENST00000412570 COL9A2Q14055 689 aaPredicted RBP9.92□□□□□ -0.82
SMPD4-203ENST00000412570 TTMPQ5BVD1 217 aa9.92□□□□□ -0.82
SMPD4-203ENST00000412570 LY6G5CQ5SRR4 150 aa9.92□□□□□ -0.82
SMPD4-203ENST00000412570 CCDC117Q8IWD4 279 aaPredicted RBP9.92□□□□□ -0.82
SMPD4-203ENST00000412570 ZNF669Q96BR6 464 aaPredicted RBP9.92□□□□□ -0.82
SMPD4-203ENST00000412570 MFSD3Q96ES6 412 aa9.92□□□□□ -0.82
SMPD4-203ENST00000412570 NOL6Q9H6R4 1146 aaKnown RBP9.92□□□□□ -0.82
SMPD4-203ENST00000412570 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP9.92□□□□□ -0.82
SMPD4-203ENST00000412570 SYBUQ9NX95 663 aa9.92□□□□□ -0.82
SMPD4-203ENST00000412570 A0A0A0MRY4 1105 aa9.91□□□□□ -0.82
SMPD4-203ENST00000412570 TYW5A2RUC4 315 aaKnown RBP9.91□□□□□ -0.82
SMPD4-203ENST00000412570 OR51F1A6NGY5 319 aa9.91□□□□□ -0.82
SMPD4-203ENST00000412570 WASH3PC4AMC7 463 aa9.91□□□□□ -0.82
SMPD4-203ENST00000412570 RIPK2O43353 540 aa9.91□□□□□ -0.82
SMPD4-203ENST00000412570 SMAD6O43541 496 aaKnown RBP9.91□□□□□ -0.82
SMPD4-203ENST00000412570 CD72P21854 359 aa9.91□□□□□ -0.82
SMPD4-203ENST00000412570 SLC8A1P32418 973 aa9.91□□□□□ -0.82
SMPD4-203ENST00000412570 OXCT1P55809 520 aa9.91□□□□□ -0.82
SMPD4-203ENST00000412570 GUCY1A3Q02108 690 aa9.91□□□□□ -0.82
SMPD4-203ENST00000412570 DMTNQ08495 405 aa9.91□□□□□ -0.82
SMPD4-203ENST00000412570 ARHGAP12Q8IWW6 846 aa9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms