RNA–Protein interactions for RNA: ENST00000411527.5

HLA-DQB2-229, Transcript of major histocompatibility complex, class II, DQ beta 2, humanhuman

BASIC

Gene HLA-DQB2, Length 1,059 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2-229ENST00000411527 KLHL10Q6JEL2 608 aa14.65□□□□□ -0.06
HLA-DQB2-229ENST00000411527 FBXL22Q6P050 247 aa14.65□□□□□ -0.06
HLA-DQB2-229ENST00000411527 KDM7AQ6ZMT4 941 aa14.65□□□□□ -0.06
HLA-DQB2-229ENST00000411527 Q6ZVU0 165 aa14.65□□□□□ -0.06
HLA-DQB2-229ENST00000411527 DCBLD1Q8N8Z6 715 aa14.65□□□□□ -0.06
HLA-DQB2-229ENST00000411527 OR52K2Q8NGK3 314 aa14.65□□□□□ -0.06
HLA-DQB2-229ENST00000411527 ALG14Q96F25 216 aa14.65□□□□□ -0.06
HLA-DQB2-229ENST00000411527 RPRD1AQ96P16 312 aaPredicted RBP14.65□□□□□ -0.06
HLA-DQB2-229ENST00000411527 FEM1AQ9BSK4 669 aa14.65□□□□□ -0.06
HLA-DQB2-229ENST00000411527 UBE2TQ9NPD8 197 aaPredicted RBP14.65□□□□□ -0.06
HLA-DQB2-229ENST00000411527 DDIT4Q9NX09 232 aa14.65□□□□□ -0.06
HLA-DQB2-229ENST00000411527 HOOK1Q9UJC3 728 aaKnown RBP14.65□□□□□ -0.06
HLA-DQB2-229ENST00000411527 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP14.64□□□□□ -0.07
HLA-DQB2-229ENST00000411527 ALOX15BO15296 676 aa14.64□□□□□ -0.07
HLA-DQB2-229ENST00000411527 SLC31A1O15431 190 aa14.64□□□□□ -0.07
HLA-DQB2-229ENST00000411527 RNGTTO60942 597 aaKnown RBP14.64□□□□□ -0.07
HLA-DQB2-229ENST00000411527 MT-CO3P00414 261 aa14.64□□□□□ -0.07
HLA-DQB2-229ENST00000411527 THEGLP0DJG4 465 aa14.64□□□□□ -0.07
HLA-DQB2-229ENST00000411527 ZNF177Q13360 481 aaPredicted RBP14.64□□□□□ -0.07
HLA-DQB2-229ENST00000411527 MEA1Q16626 185 aa14.64□□□□□ -0.07
HLA-DQB2-229ENST00000411527 HS1BP3Q53T59 392 aa14.64□□□□□ -0.07
HLA-DQB2-229ENST00000411527 TTI2Q6NXR4 508 aa14.64□□□□□ -0.07
HLA-DQB2-229ENST00000411527 GPR155Q7Z3F1 870 aa14.64□□□□□ -0.07
HLA-DQB2-229ENST00000411527 DEFB106AQ8N104 65 aa14.64□□□□□ -0.07
HLA-DQB2-229ENST00000411527 LSM14AQ8ND56 463 aaKnown RBP14.64□□□□□ -0.07
HLA-DQB2-229ENST00000411527 KLK6Q92876 244 aa14.64□□□□□ -0.07
HLA-DQB2-229ENST00000411527 MYOCQ99972 504 aa14.64□□□□□ -0.07
HLA-DQB2-229ENST00000411527 INTS2Q9H0H0 1204 aaKnown RBP14.64□□□□□ -0.07
HLA-DQB2-229ENST00000411527 ACP6Q9NPH0 428 aa14.64□□□□□ -0.07
HLA-DQB2-229ENST00000411527 VPS28Q9UK41 221 aa14.64□□□□□ -0.07
HLA-DQB2-229ENST00000411527 VANGL2Q9ULK5 521 aa14.64□□□□□ -0.07
HLA-DQB2-229ENST00000411527 PTPRQQ9UMZ3 2332 aa14.64□□□□□ -0.07
HLA-DQB2-229ENST00000411527 AFPP02771 609 aaKnown RBP14.63□□□□□ -0.07
HLA-DQB2-229ENST00000411527 PRLRP16471 622 aa14.63□□□□□ -0.07
HLA-DQB2-229ENST00000411527 DGKAP23743 735 aa14.63□□□□□ -0.07
HLA-DQB2-229ENST00000411527 GNA15P30679 374 aa14.63□□□□□ -0.07
HLA-DQB2-229ENST00000411527 PPP1R2P41236 205 aa14.63□□□□□ -0.07
HLA-DQB2-229ENST00000411527 IRAK1P51617 712 aa14.63□□□□□ -0.07
HLA-DQB2-229ENST00000411527 TAS2R38P59533 333 aa14.63□□□□□ -0.07
HLA-DQB2-229ENST00000411527 TLE3Q04726 772 aa14.63□□□□□ -0.07
HLA-DQB2-229ENST00000411527 KCNMA1Q12791 1236 aa14.63□□□□□ -0.07
HLA-DQB2-229ENST00000411527 PDCLQ13371 301 aa14.63□□□□□ -0.07
HLA-DQB2-229ENST00000411527 AUHQ13825 339 aaKnown RBP14.63□□□□□ -0.07
HLA-DQB2-229ENST00000411527 TBC1D25Q3MII6 688 aa14.63□□□□□ -0.07
HLA-DQB2-229ENST00000411527 TMC6Q7Z403 805 aa14.63□□□□□ -0.07
HLA-DQB2-229ENST00000411527 TRIM59Q8IWR1 403 aa14.63□□□□□ -0.07
HLA-DQB2-229ENST00000411527 SH2D3CQ8N5H7 860 aa14.63□□□□□ -0.07
HLA-DQB2-229ENST00000411527 NELFBQ8WX92 580 aa14.63□□□□□ -0.07
HLA-DQB2-229ENST00000411527 TIGD1Q96MW7 591 aa14.63□□□□□ -0.07
HLA-DQB2-229ENST00000411527 PREBQ9HCU5 417 aa14.63□□□□□ -0.07
HLA-DQB2-229ENST00000411527 UCKL1Q9NWZ5 548 aa14.63□□□□□ -0.07
HLA-DQB2-229ENST00000411527 MAN1B1Q9UKM7 699 aa14.63□□□□□ -0.07
HLA-DQB2-229ENST00000411527 OR51B4Q9Y5P0 310 aa14.63□□□□□ -0.07
HLA-DQB2-229ENST00000411527 TEX51A0A1B0GUA7 166 aa14.62□□□□□ -0.07
HLA-DQB2-229ENST00000411527 A0A1W2PQU0 124 aa14.62□□□□□ -0.07
HLA-DQB2-229ENST00000411527 KPNA3O00505 521 aaPredicted RBP14.62□□□□□ -0.07
HLA-DQB2-229ENST00000411527 FFAR2O15552 330 aa14.62□□□□□ -0.07
HLA-DQB2-229ENST00000411527 GRAP2O75791 330 aa14.62□□□□□ -0.07
HLA-DQB2-229ENST00000411527 CXADRP78310 365 aa14.62□□□□□ -0.07
HLA-DQB2-229ENST00000411527 NME3Q13232 169 aa14.62□□□□□ -0.07
HLA-DQB2-229ENST00000411527 EFHC1Q5JVL4 640 aa14.62□□□□□ -0.07
HLA-DQB2-229ENST00000411527 PIP5KL1Q5T9C9 394 aa14.62□□□□□ -0.07
HLA-DQB2-229ENST00000411527 ERICH1Q86X53 443 aa14.62□□□□□ -0.07
HLA-DQB2-229ENST00000411527 SPACA3Q8IXA5 215 aa14.62□□□□□ -0.07
HLA-DQB2-229ENST00000411527 WDTC1Q8N5D0 677 aa14.62□□□□□ -0.07
HLA-DQB2-229ENST00000411527 TMEM145Q8NBT3 493 aa14.62□□□□□ -0.07
HLA-DQB2-229ENST00000411527 OR4C6Q8NH72 309 aa14.62□□□□□ -0.07
HLA-DQB2-229ENST00000411527 SLC2A13Q96QE2 648 aa14.62□□□□□ -0.07
HLA-DQB2-229ENST00000411527 CALN1Q9BXU9 219 aa14.62□□□□□ -0.07
HLA-DQB2-229ENST00000411527 SIK2Q9H0K1 926 aa14.62□□□□□ -0.07
HLA-DQB2-229ENST00000411527 MUC3BQ9H195 1237 aa14.62□□□□□ -0.07
HLA-DQB2-229ENST00000411527 KLHL11Q9NVR0 708 aa14.62□□□□□ -0.07
HLA-DQB2-229ENST00000411527 FARP1Q9Y4F1 1045 aaPredicted RBP14.62□□□□□ -0.07
HLA-DQB2-229ENST00000411527 PCDHB1Q9Y5F3 818 aa14.62□□□□□ -0.07
HLA-DQB2-229ENST00000411527 UTP18Q9Y5J1 556 aaKnown RBP eCLIP14.62□□□□□ -0.07
HLA-DQB2-229ENST00000411527 BICDL2A1A5D9 508 aa14.61□□□□□ -0.07
HLA-DQB2-229ENST00000411527 PPP1R3GB7ZBB8 358 aa14.61□□□□□ -0.07
HLA-DQB2-229ENST00000411527 PAGE1O75459 146 aa14.61□□□□□ -0.07
HLA-DQB2-229ENST00000411527 CLDN11O75508 207 aa14.61□□□□□ -0.07
HLA-DQB2-229ENST00000411527 GNA14O95837 355 aa14.61□□□□□ -0.07
HLA-DQB2-229ENST00000411527 MT-CO1P00395 513 aa14.61□□□□□ -0.07
HLA-DQB2-229ENST00000411527 CTSLP07711 333 aa14.61□□□□□ -0.07
HLA-DQB2-229ENST00000411527 GLI1P08151 1106 aa14.61□□□□□ -0.07
HLA-DQB2-229ENST00000411527 SRCP12931 536 aa14.61□□□□□ -0.07
HLA-DQB2-229ENST00000411527 CHRNA3P32297 505 aa14.61□□□□□ -0.07
HLA-DQB2-229ENST00000411527 GGCXP38435 758 aa14.61□□□□□ -0.07
HLA-DQB2-229ENST00000411527 USP8P40818 1118 aa14.61□□□□□ -0.07
HLA-DQB2-229ENST00000411527 STX17P56962 302 aa14.61□□□□□ -0.07
HLA-DQB2-229ENST00000411527 KRT83P78385 493 aa14.61□□□□□ -0.07
HLA-DQB2-229ENST00000411527 CCDC15Q0P6D6 951 aa14.61□□□□□ -0.07
HLA-DQB2-229ENST00000411527 NEK5Q6P3R8 708 aa14.61□□□□□ -0.07
HLA-DQB2-229ENST00000411527 C14orf80Q86SX3 495 aa14.61□□□□□ -0.07
HLA-DQB2-229ENST00000411527 ZNF605Q86T29 641 aa14.61□□□□□ -0.07
HLA-DQB2-229ENST00000411527 HORMAD1Q86X24 394 aa14.61□□□□□ -0.07
HLA-DQB2-229ENST00000411527 ZNF843Q8N446 348 aa14.61□□□□□ -0.07
HLA-DQB2-229ENST00000411527 ATP11CQ8NB49 1132 aa14.61□□□□□ -0.07
HLA-DQB2-229ENST00000411527 OR13H1Q8NG92 308 aa14.61□□□□□ -0.07
HLA-DQB2-229ENST00000411527 NAF1Q96HR8 494 aaKnown RBP14.61□□□□□ -0.07
HLA-DQB2-229ENST00000411527 PPP1R13BQ96KQ4 1090 aa14.61□□□□□ -0.07
HLA-DQB2-229ENST00000411527 CPXM1Q96SM3 734 aa14.61□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms