RNA–Protein interactions for RNA: ENST00000410093.5

LIMS1-205, Transcript of LIM zinc finger domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene LIMS1, Length 1,526 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-205ENST00000410093 PCDH10Q9P2E7 1040 aa13.85□□□□□ -0.19
LIMS1-205ENST00000410093 MID2Q9UJV3 735 aa13.85□□□□□ -0.19
LIMS1-205ENST00000410093 SOX13Q9UN79 622 aa13.85□□□□□ -0.19
LIMS1-205ENST00000410093 NUP205Q92621 2012 aa13.85□□□□□ -0.19
LIMS1-205ENST00000410093 DNAJC6O75061 913 aa13.85□□□□□ -0.19
LIMS1-205ENST00000410093 ITGA2BP08514 1039 aa13.85□□□□□ -0.19
LIMS1-205ENST00000410093 RHOQP17081 205 aa13.85□□□□□ -0.19
LIMS1-205ENST00000410093 FGFR3P22607 806 aa13.85□□□□□ -0.19
LIMS1-205ENST00000410093 CD68P34810 354 aaPredicted RBP13.85□□□□□ -0.19
LIMS1-205ENST00000410093 RPL10AP62906 217 aaKnown RBP13.85□□□□□ -0.19
LIMS1-205ENST00000410093 FPGSQ05932 587 aa13.85□□□□□ -0.19
LIMS1-205ENST00000410093 MBTPS1Q14703 1052 aa13.85□□□□□ -0.19
LIMS1-205ENST00000410093 UGP2Q16851 508 aa13.85□□□□□ -0.19
LIMS1-205ENST00000410093 CCDC153Q494R4 210 aa13.85□□□□□ -0.19
LIMS1-205ENST00000410093 CTXN3Q4LDR2 81 aa13.85□□□□□ -0.19
LIMS1-205ENST00000410093 ANKRD20A4Q4UJ75 823 aa13.85□□□□□ -0.19
LIMS1-205ENST00000410093 FAM133BQ5BKY9 247 aaKnown RBP13.85□□□□□ -0.19
LIMS1-205ENST00000410093 MROH9Q5TGP6 573 aa13.85□□□□□ -0.19
LIMS1-205ENST00000410093 FAM91A1Q658Y4 838 aa13.85□□□□□ -0.19
LIMS1-205ENST00000410093 PDPK2PQ6A1A2 396 aa13.85□□□□□ -0.19
LIMS1-205ENST00000410093 RASSF3Q86WH2 238 aa13.85□□□□□ -0.19
LIMS1-205ENST00000410093 NUDCD3Q8IVD9 361 aa13.85□□□□□ -0.19
LIMS1-205ENST00000410093 SCN4BQ8IWT1 228 aa13.85□□□□□ -0.19
LIMS1-205ENST00000410093 UMODL1-AS1Q8N2C9 162 aa13.85□□□□□ -0.19
LIMS1-205ENST00000410093 CCDC33Q8N5R6 958 aa13.85□□□□□ -0.19
LIMS1-205ENST00000410093 STKLD1Q8NE28 680 aa13.85□□□□□ -0.19
LIMS1-205ENST00000410093 OR52K1Q8NGK4 314 aa13.85□□□□□ -0.19
LIMS1-205ENST00000410093 ZSCAN18Q8TBC5 510 aaPredicted RBP13.85□□□□□ -0.19
LIMS1-205ENST00000410093 LRRN4Q8WUT4 740 aa13.85□□□□□ -0.19
LIMS1-205ENST00000410093 CASP10Q92851 521 aa13.85□□□□□ -0.19
LIMS1-205ENST00000410093 E2F7Q96AV8 911 aa13.85□□□□□ -0.19
LIMS1-205ENST00000410093 KLHL29Q96CT2 875 aa13.85□□□□□ -0.19
LIMS1-205ENST00000410093 RMDN2Q96LZ7 410 aa13.85□□□□□ -0.19
LIMS1-205ENST00000410093 TMEM237Q96Q45 408 aa13.85□□□□□ -0.19
LIMS1-205ENST00000410093 KLF6Q99612 283 aaPredicted RBP13.85□□□□□ -0.19
LIMS1-205ENST00000410093 KIFC1Q9BW19 673 aa13.85□□□□□ -0.19
LIMS1-205ENST00000410093 ARHGEF3Q9NR81 526 aa13.85□□□□□ -0.19
LIMS1-205ENST00000410093 TLR8Q9NR97 1041 aaKnown RBP13.85□□□□□ -0.19
LIMS1-205ENST00000410093 ABI2Q9NYB9 513 aaPredicted RBP13.85□□□□□ -0.19
LIMS1-205ENST00000410093 KCNK4Q9NYG8 393 aa13.85□□□□□ -0.19
LIMS1-205ENST00000410093 NEU3Q9UQ49 428 aa13.85□□□□□ -0.19
LIMS1-205ENST00000410093 DOCK4Q8N1I0 1966 aa13.84□□□□□ -0.19
LIMS1-205ENST00000410093 CARNS1A5YM72 827 aa13.84□□□□□ -0.19
LIMS1-205ENST00000410093 E9PAM4 449 aa13.84□□□□□ -0.19
LIMS1-205ENST00000410093 ENPP3O14638 875 aa13.84□□□□□ -0.19
LIMS1-205ENST00000410093 MGRN1O60291 552 aa13.84□□□□□ -0.19
LIMS1-205ENST00000410093 TIMP1P01033 207 aa13.84□□□□□ -0.19
LIMS1-205ENST00000410093 JCHAINP01591 159 aa13.84□□□□□ -0.19
LIMS1-205ENST00000410093 BPGMP07738 259 aa13.84□□□□□ -0.19
LIMS1-205ENST00000410093 NFKB1P19838 968 aa13.84□□□□□ -0.19
LIMS1-205ENST00000410093 GRK2P25098 689 aa13.84□□□□□ -0.19
LIMS1-205ENST00000410093 YWHAQP27348 245 aa13.84□□□□□ -0.19
LIMS1-205ENST00000410093 HNRNPH1P31943 449 aaKnown RBP13.84□□□□□ -0.19
LIMS1-205ENST00000410093 MAGEA12P43365 314 aa13.84□□□□□ -0.19
LIMS1-205ENST00000410093 SERPINB8P50452 374 aa13.84□□□□□ -0.19
LIMS1-205ENST00000410093 TUBP50607 506 aa13.84□□□□□ -0.19
LIMS1-205ENST00000410093 NCALDP61601 193 aa13.84□□□□□ -0.19
LIMS1-205ENST00000410093 PDE1BQ01064 536 aa13.84□□□□□ -0.19
LIMS1-205ENST00000410093 RING1Q06587 406 aa13.84□□□□□ -0.19
LIMS1-205ENST00000410093 TNK2Q07912 1038 aa13.84□□□□□ -0.19
LIMS1-205ENST00000410093 ZBTB17Q13105 803 aa13.84□□□□□ -0.19
LIMS1-205ENST00000410093 GPR17Q13304 367 aa13.84□□□□□ -0.19
LIMS1-205ENST00000410093 MPP3Q13368 585 aa13.84□□□□□ -0.19
LIMS1-205ENST00000410093 TRIP4Q15650 581 aaPredicted RBP13.84□□□□□ -0.19
LIMS1-205ENST00000410093 PCID2Q5JVF3 399 aa13.84□□□□□ -0.19
LIMS1-205ENST00000410093 CYB5D1Q6P9G0 228 aa13.84□□□□□ -0.19
LIMS1-205ENST00000410093 ANKS3Q6ZW76 656 aa13.84□□□□□ -0.19
LIMS1-205ENST00000410093 ASRGL1Q7L266 308 aa13.84□□□□□ -0.19
LIMS1-205ENST00000410093 NLRP9Q7RTR0 991 aa13.84□□□□□ -0.19
LIMS1-205ENST00000410093 ARHGAP12Q8IWW6 846 aa13.84□□□□□ -0.19
LIMS1-205ENST00000410093 TMEM199Q8N511 208 aa13.84□□□□□ -0.19
LIMS1-205ENST00000410093 BTN2A3PQ96KV6 586 aa13.84□□□□□ -0.19
LIMS1-205ENST00000410093 AGAP3Q96P47 875 aa13.84□□□□□ -0.19
LIMS1-205ENST00000410093 RBBP8Q99708 897 aa13.84□□□□□ -0.19
LIMS1-205ENST00000410093 PRKD2Q9BZL6 878 aa13.84□□□□□ -0.19
LIMS1-205ENST00000410093 GLOD4Q9HC38 313 aa13.84□□□□□ -0.19
LIMS1-205ENST00000410093 THAP1Q9NVV9 213 aa13.84□□□□□ -0.19
LIMS1-205ENST00000410093 LRFN2Q9ULH4 789 aa13.84□□□□□ -0.19
LIMS1-205ENST00000410093 RPL26L1Q9UNX3 145 aaKnown RBP13.84□□□□□ -0.19
LIMS1-205ENST00000410093 VWA8A3KMH1 1905 aa13.83□□□□□ -0.2
LIMS1-205ENST00000410093 A0A1W2PQH9 124 aa13.83□□□□□ -0.2
LIMS1-205ENST00000410093 HMX2A2RU54 273 aa13.83□□□□□ -0.2
LIMS1-205ENST00000410093 TRAFD1O14545 582 aaPredicted RBP13.83□□□□□ -0.2
LIMS1-205ENST00000410093 MAFKO60675 156 aa13.83□□□□□ -0.2
LIMS1-205ENST00000410093 H2AFYO75367 372 aaKnown RBP13.83□□□□□ -0.2
LIMS1-205ENST00000410093 APOA4P06727 396 aa13.83□□□□□ -0.2
LIMS1-205ENST00000410093 NQO1P15559 274 aaKnown RBP13.83□□□□□ -0.2
LIMS1-205ENST00000410093 PAMP19021 973 aa13.83□□□□□ -0.2
LIMS1-205ENST00000410093 RENBPP51606 427 aa13.83□□□□□ -0.2
LIMS1-205ENST00000410093 ARFIP2P53365 341 aa13.83□□□□□ -0.2
LIMS1-205ENST00000410093 RABGGTBP53611 331 aa13.83□□□□□ -0.2
LIMS1-205ENST00000410093 LIMK2P53671 638 aa13.83□□□□□ -0.2
LIMS1-205ENST00000410093 PRKAA2P54646 552 aa13.83□□□□□ -0.2
LIMS1-205ENST00000410093 TBX4P57082 545 aa13.83□□□□□ -0.2
LIMS1-205ENST00000410093 HNRNPDQ14103 355 aaKnown RBP13.83□□□□□ -0.2
LIMS1-205ENST00000410093 TBCCQ15814 346 aa13.83□□□□□ -0.2
LIMS1-205ENST00000410093 SNCBQ16143 134 aa13.83□□□□□ -0.2
LIMS1-205ENST00000410093 GPR153Q6NV75 609 aa13.83□□□□□ -0.2
LIMS1-205ENST00000410093 CRLF3Q8IUI8 442 aa13.83□□□□□ -0.2
LIMS1-205ENST00000410093 PARP9Q8IXQ6 854 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms