RNA–Protein interactions for RNA: ENST00000409952.3

LSM5-205, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 4 BASIC

Gene LSM5, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-205ENST00000409952 GKAP1Q5VSY0 366 aaPredicted RBP5.18□□□□□ -1.58
LSM5-205ENST00000409952 DRICH1Q6PGQ1 229 aaPredicted RBP5.18□□□□□ -1.58
LSM5-205ENST00000409952 TRAT1Q6PIZ9 186 aa5.18□□□□□ -1.58
LSM5-205ENST00000409952 BTN2A1Q7KYR7 527 aa5.18□□□□□ -1.58
LSM5-205ENST00000409952 UBE2Q1Q7Z7E8 422 aa5.18□□□□□ -1.58
LSM5-205ENST00000409952 FAM83AQ86UY5 434 aa5.18□□□□□ -1.58
LSM5-205ENST00000409952 PLD5Q8N7P1 536 aa5.18□□□□□ -1.58
LSM5-205ENST00000409952 IL17RCQ8NAC3 791 aa5.18□□□□□ -1.58
LSM5-205ENST00000409952 CADM4Q8NFZ8 388 aa5.18□□□□□ -1.58
LSM5-205ENST00000409952 KIF18AQ8NI77 898 aa5.18□□□□□ -1.58
LSM5-205ENST00000409952 DUSP19Q8WTR2 217 aa5.18□□□□□ -1.58
LSM5-205ENST00000409952 CLEC4CQ8WTT0 213 aa5.18□□□□□ -1.58
LSM5-205ENST00000409952 OSCP1Q8WVF1 389 aa5.18□□□□□ -1.58
LSM5-205ENST00000409952 RAB40AQ8WXH6 277 aa5.18□□□□□ -1.58
LSM5-205ENST00000409952 ST8SIA2Q92186 375 aa5.18□□□□□ -1.58
LSM5-205ENST00000409952 SAT2Q96F10 170 aaPredicted RBP5.18□□□□□ -1.58
LSM5-205ENST00000409952 MARS2Q96GW9 593 aaKnown RBP5.18□□□□□ -1.58
LSM5-205ENST00000409952 WDFY2Q96P53 400 aa5.18□□□□□ -1.58
LSM5-205ENST00000409952 GNRHR2Q96P88 292 aa5.18□□□□□ -1.58
LSM5-205ENST00000409952 C17orf80Q9BSJ5 609 aa5.18□□□□□ -1.58
LSM5-205ENST00000409952 TUBB6Q9BUF5 446 aa5.18□□□□□ -1.58
LSM5-205ENST00000409952 STRA6Q9BX79 667 aa5.18□□□□□ -1.58
LSM5-205ENST00000409952 POLR1BQ9H9Y6 1135 aa5.18□□□□□ -1.58
LSM5-205ENST00000409952 TRMT1Q9NXH9 659 aaKnown RBP5.18□□□□□ -1.58
LSM5-205ENST00000409952 CTTNBP2NLQ9P2B4 639 aa5.18□□□□□ -1.58
LSM5-205ENST00000409952 PPIEQ9UNP9 301 aaKnown RBP5.18□□□□□ -1.58
LSM5-205ENST00000409952 AGTPBP1Q9UPW5 1226 aa5.18□□□□□ -1.58
LSM5-205ENST00000409952 BTBD3Q9Y2F9 522 aa5.18□□□□□ -1.58
LSM5-205ENST00000409952 MYRFQ9Y2G1 1151 aa5.18□□□□□ -1.58
LSM5-205ENST00000409952 PCDHB2Q9Y5E7 798 aa5.18□□□□□ -1.58
LSM5-205ENST00000409952 CAPN7Q9Y6W3 813 aa5.18□□□□□ -1.58
LSM5-205ENST00000409952 ADGRF5Q8IZF2 1346 aa5.18□□□□□ -1.58
LSM5-205ENST00000409952 ABCC9O60706 1549 aa5.18□□□□□ -1.58
LSM5-205ENST00000409952 A0A1W2PQF6 199 aa5.17□□□□□ -1.58
LSM5-205ENST00000409952 CCDC151A5D8V7 595 aa5.17□□□□□ -1.58
LSM5-205ENST00000409952 URADA6NGE7 173 aa5.17□□□□□ -1.58
LSM5-205ENST00000409952 BTBD18B2RXH4 712 aa5.17□□□□□ -1.58
LSM5-205ENST00000409952 H0YAE9 185 aa5.17□□□□□ -1.58
LSM5-205ENST00000409952 PAGE4O60829 102 aa5.17□□□□□ -1.58
LSM5-205ENST00000409952 ZNF623O75123 536 aa5.17□□□□□ -1.58
LSM5-205ENST00000409952 PSMD10O75832 226 aa5.17□□□□□ -1.58
LSM5-205ENST00000409952 RAD17O75943 681 aa5.17□□□□□ -1.58
LSM5-205ENST00000409952 TUBBP07437 444 aa5.17□□□□□ -1.58
LSM5-205ENST00000409952 ABCB1P08183 1280 aaPredicted RBP5.17□□□□□ -1.58
LSM5-205ENST00000409952 PRR35P0CG20 571 aa5.17□□□□□ -1.58
LSM5-205ENST00000409952 PEPDP12955 493 aa5.17□□□□□ -1.58
LSM5-205ENST00000409952 LYL1P12980 280 aa5.17□□□□□ -1.58
LSM5-205ENST00000409952 ARSAP15289 507 aa5.17□□□□□ -1.58
LSM5-205ENST00000409952 CR2P20023 1033 aa5.17□□□□□ -1.58
LSM5-205ENST00000409952 CD86P42081 329 aa5.17□□□□□ -1.58
LSM5-205ENST00000409952 STAT2P52630 851 aa5.17□□□□□ -1.58
LSM5-205ENST00000409952 CHN2P52757 468 aa5.17□□□□□ -1.58
LSM5-205ENST00000409952 ARHGAP8P85298 464 aa5.17□□□□□ -1.58
LSM5-205ENST00000409952 NIPAL4Q0D2K0 466 aa5.17□□□□□ -1.58
LSM5-205ENST00000409952 BAATQ14032 418 aaPredicted RBP5.17□□□□□ -1.58
LSM5-205ENST00000409952 KCNB1Q14721 858 aa5.17□□□□□ -1.58
LSM5-205ENST00000409952 PTPN14Q15678 1187 aa5.17□□□□□ -1.58
LSM5-205ENST00000409952 GSTA3Q16772 222 aa5.17□□□□□ -1.58
LSM5-205ENST00000409952 ST3GAL2Q16842 350 aa5.17□□□□□ -1.58
LSM5-205ENST00000409952 C2orf76Q3KRA6 126 aa5.17□□□□□ -1.58
LSM5-205ENST00000409952 ZNF667Q5HYK9 610 aa5.17□□□□□ -1.58
LSM5-205ENST00000409952 CC2D1BQ5T0F9 858 aaKnown RBP5.17□□□□□ -1.58
LSM5-205ENST00000409952 HMBOX1Q6NT76 420 aa5.17□□□□□ -1.58
LSM5-205ENST00000409952 CAVIN1Q6NZI2 390 aaKnown RBP5.17□□□□□ -1.58
LSM5-205ENST00000409952 C16orf89Q6UX73 402 aa5.17□□□□□ -1.58
LSM5-205ENST00000409952 DBX2Q6ZNG2 339 aa5.17□□□□□ -1.58
LSM5-205ENST00000409952 PARS2Q7L3T8 475 aaKnown RBP5.17□□□□□ -1.58
LSM5-205ENST00000409952 SLC46A3Q7Z3Q1 461 aa5.17□□□□□ -1.58
LSM5-205ENST00000409952 TAX1BP1Q86VP1 789 aa5.17□□□□□ -1.58
LSM5-205ENST00000409952 C10orf53Q8N6V4 93 aa5.17□□□□□ -1.58
LSM5-205ENST00000409952 EXOC4Q96A65 974 aa5.17□□□□□ -1.58
LSM5-205ENST00000409952 CABS1Q96KC9 395 aa5.17□□□□□ -1.58
LSM5-205ENST00000409952 C1orf74Q96LT6 269 aa5.17□□□□□ -1.58
LSM5-205ENST00000409952 FER1L6-AS2Q96M78 137 aa5.17□□□□□ -1.58
LSM5-205ENST00000409952 ACAT2Q9BWD1 397 aa5.17□□□□□ -1.58
LSM5-205ENST00000409952 NPLQ9BXD5 320 aaPredicted RBP5.17□□□□□ -1.58
LSM5-205ENST00000409952 REXO4Q9GZR2 422 aaKnown RBP5.17□□□□□ -1.58
LSM5-205ENST00000409952 DEF6Q9H4E7 631 aa5.17□□□□□ -1.58
LSM5-205ENST00000409952 CYP4F11Q9HBI6 524 aa5.17□□□□□ -1.58
LSM5-205ENST00000409952 FBRSL1Q9HCM7 1045 aaKnown RBP5.17□□□□□ -1.58
LSM5-205ENST00000409952 SNX15Q9NRS6 342 aa5.17□□□□□ -1.58
LSM5-205ENST00000409952 TBCCD1Q9NVR7 557 aa5.17□□□□□ -1.58
LSM5-205ENST00000409952 COQ3Q9NZJ6 369 aa5.17□□□□□ -1.58
LSM5-205ENST00000409952 IL1RAPL1Q9NZN1 696 aa5.17□□□□□ -1.58
LSM5-205ENST00000409952 POGKQ9P215 609 aa5.17□□□□□ -1.58
LSM5-205ENST00000409952 UBA2Q9UBT2 640 aaPredicted RBP5.17□□□□□ -1.58
LSM5-205ENST00000409952 NKX1-2Q9UD57 310 aaPredicted RBP5.17□□□□□ -1.58
LSM5-205ENST00000409952 SEC63Q9UGP8 760 aaKnown RBP5.17□□□□□ -1.58
LSM5-205ENST00000409952 ST6GALNAC2Q9UJ37 374 aa5.17□□□□□ -1.58
LSM5-205ENST00000409952 MOSPD1Q9UJG1 213 aa5.17□□□□□ -1.58
LSM5-205ENST00000409952 SERTAD3Q9UJW9 196 aa5.17□□□□□ -1.58
LSM5-205ENST00000409952 MKLN1Q9UL63 735 aa5.17□□□□□ -1.58
LSM5-205ENST00000409952 MAFFQ9ULX9 164 aa5.17□□□□□ -1.58
LSM5-205ENST00000409952 MTMR6Q9Y217 621 aa5.17□□□□□ -1.58
LSM5-205ENST00000409952 SSX2IPQ9Y2D8 614 aa5.17□□□□□ -1.58
LSM5-205ENST00000409952 PTRH2Q9Y3E5 179 aaKnown RBP5.17□□□□□ -1.58
LSM5-205ENST00000409952 TSC22D4Q9Y3Q8 395 aa5.17□□□□□ -1.58
LSM5-205ENST00000409952 NR2E1Q9Y466 385 aa5.17□□□□□ -1.58
LSM5-205ENST00000409952 MTF2Q9Y483 593 aaPredicted RBP5.17□□□□□ -1.58
LSM5-205ENST00000409952 TESMINQ9Y4I5 508 aa5.17□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms