RNA–Protein interactions for RNA: ENST00000409886.3

RGPD3-202, Transcript of RANBP2-like and GRIP domain containing 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RGPD3, Length 5,594 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD3-202ENST00000409886 GCNT4Q9P109 453 aa3.21□□□□□ -1.9
RGPD3-202ENST00000409886 PCYOX1Q9UHG3 505 aa3.21□□□□□ -1.9
RGPD3-202ENST00000409886 RIMS3Q9UJD0 308 aa3.21□□□□□ -1.9
RGPD3-202ENST00000409886 PI4KAP42356 2102 aa3.21□□□□□ -1.9
RGPD3-202ENST00000409886 C15orf38-AP3S2A0A0A6YYH1 394 aa3.21□□□□□ -1.9
RGPD3-202ENST00000409886 TCAF2A6NFQ2 919 aa3.21□□□□□ -1.9
RGPD3-202ENST00000409886 C2CD4DB7Z1M9 353 aa3.21□□□□□ -1.9
RGPD3-202ENST00000409886 B3GALT4O96024 378 aa3.21□□□□□ -1.9
RGPD3-202ENST00000409886 TMEM253P0C7T8 217 aa3.21□□□□□ -1.9
RGPD3-202ENST00000409886 PCK1P35558 622 aa3.21□□□□□ -1.9
RGPD3-202ENST00000409886 COILP38432 576 aaPredicted RBP3.21□□□□□ -1.9
RGPD3-202ENST00000409886 MLLT6P55198 1093 aaPredicted RBP3.21□□□□□ -1.9
RGPD3-202ENST00000409886 KCNC4Q03721 635 aa3.21□□□□□ -1.9
RGPD3-202ENST00000409886 KRT17Q04695 432 aa3.21□□□□□ -1.9
RGPD3-202ENST00000409886 GABPAQ06546 454 aa3.21□□□□□ -1.9
RGPD3-202ENST00000409886 DLX2Q07687 328 aaPredicted RBP3.21□□□□□ -1.9
RGPD3-202ENST00000409886 BIRC3Q13489 604 aa3.21□□□□□ -1.9
RGPD3-202ENST00000409886 PCSK7Q16549 785 aa3.21□□□□□ -1.9
RGPD3-202ENST00000409886 BRDTQ58F21 947 aaPredicted RBP3.21□□□□□ -1.9
RGPD3-202ENST00000409886 HMBOX1Q6NT76 420 aa3.21□□□□□ -1.9
RGPD3-202ENST00000409886 CES3Q6UWW8 571 aa3.21□□□□□ -1.9
RGPD3-202ENST00000409886 RNF19BQ6ZMZ0 732 aa3.21□□□□□ -1.9
RGPD3-202ENST00000409886 ARPINQ7Z6K5 226 aa3.21□□□□□ -1.9
RGPD3-202ENST00000409886 CMC1Q7Z7K0 106 aa3.21□□□□□ -1.9
RGPD3-202ENST00000409886 GLRX5Q86SX6 157 aa3.21□□□□□ -1.9
RGPD3-202ENST00000409886 KBTBD6Q86V97 674 aa3.21□□□□□ -1.9
RGPD3-202ENST00000409886 MFN1Q8IWA4 741 aa3.21□□□□□ -1.9
RGPD3-202ENST00000409886 TRIM42Q8IWZ5 723 aa3.21□□□□□ -1.9
RGPD3-202ENST00000409886 CLIP4Q8N3C7 705 aa3.21□□□□□ -1.9
RGPD3-202ENST00000409886 ATP6V1E2Q96A05 226 aa3.21□□□□□ -1.9
RGPD3-202ENST00000409886 PCMTD1Q96MG8 357 aaPredicted RBP3.21□□□□□ -1.9
RGPD3-202ENST00000409886 TWNKQ96RR1 684 aa3.21□□□□□ -1.9
RGPD3-202ENST00000409886 LPIN3Q9BQK8 851 aa3.21□□□□□ -1.9
RGPD3-202ENST00000409886 TDRD1Q9BXT4 1180 aaKnown RBP3.21□□□□□ -1.9
RGPD3-202ENST00000409886 EXD2Q9NVH0 621 aa3.21□□□□□ -1.9
RGPD3-202ENST00000409886 PAK1IP1Q9NWT1 392 aaPredicted RBP3.21□□□□□ -1.9
RGPD3-202ENST00000409886 HESX1Q9UBX0 185 aa3.21□□□□□ -1.9
RGPD3-202ENST00000409886 ARL2BPQ9Y2Y0 163 aa3.21□□□□□ -1.9
RGPD3-202ENST00000409886 ZNF711Q9Y462 761 aa3.21□□□□□ -1.9
RGPD3-202ENST00000409886 PTGDR2Q9Y5Y4 395 aa3.21□□□□□ -1.9
RGPD3-202ENST00000409886 ACACBO00763 2458 aa3.21□□□□□ -1.9
RGPD3-202ENST00000409886 A0A087WV48 116 aa3.2□□□□□ -1.9
RGPD3-202ENST00000409886 TEX51A0A1B0GUA7 166 aa3.2□□□□□ -1.9
RGPD3-202ENST00000409886 SLC12A8A0AV02 714 aa3.2□□□□□ -1.9
RGPD3-202ENST00000409886 ARHGAP10A1A4S6 786 aa3.2□□□□□ -1.9
RGPD3-202ENST00000409886 PRORSD1PA6NEY8 169 aa3.2□□□□□ -1.9
RGPD3-202ENST00000409886 C3orf70A6NLC5 250 aaPredicted RBP3.2□□□□□ -1.9
RGPD3-202ENST00000409886 A8MX80 341 aa3.2□□□□□ -1.9
RGPD3-202ENST00000409886 SIGLEC5O15389 551 aa3.2□□□□□ -1.9
RGPD3-202ENST00000409886 MAGEB2O15479 319 aa3.2□□□□□ -1.9
RGPD3-202ENST00000409886 MYL2P10916 166 aa3.2□□□□□ -1.9
RGPD3-202ENST00000409886 ANPEPP15144 967 aa3.2□□□□□ -1.9
RGPD3-202ENST00000409886 CA4P22748 312 aa3.2□□□□□ -1.9
RGPD3-202ENST00000409886 AXLP30530 894 aa3.2□□□□□ -1.9
RGPD3-202ENST00000409886 CTNNB1P35222 781 aa3.2□□□□□ -1.9
RGPD3-202ENST00000409886 GARSP41250 739 aaKnown RBP3.2□□□□□ -1.9
RGPD3-202ENST00000409886 EIF3EP60228 445 aaKnown RBP3.2□□□□□ -1.9
RGPD3-202ENST00000409886 KRT83P78385 493 aa3.2□□□□□ -1.9
RGPD3-202ENST00000409886 MXRA7P84157 204 aa3.2□□□□□ -1.9
RGPD3-202ENST00000409886 PURAQ00577 322 aaKnown RBP3.2□□□□□ -1.9
RGPD3-202ENST00000409886 PUM3Q15397 648 aaKnown RBP3.2□□□□□ -1.9
RGPD3-202ENST00000409886 GNASQ5JWF2 1037 aa3.2□□□□□ -1.9
RGPD3-202ENST00000409886 B3GNT9Q6UX72 402 aa3.2□□□□□ -1.9
RGPD3-202ENST00000409886 UNC13DQ70J99 1090 aa3.2□□□□□ -1.9
RGPD3-202ENST00000409886 RAB44Q7Z6P3 723 aaPredicted RBP3.2□□□□□ -1.9
RGPD3-202ENST00000409886 RSPH3Q86UC2 560 aa3.2□□□□□ -1.9
RGPD3-202ENST00000409886 TLK2Q86UE8 772 aa3.2□□□□□ -1.9
RGPD3-202ENST00000409886 RETREG3Q86VR2 466 aa3.2□□□□□ -1.9
RGPD3-202ENST00000409886 OFCC1Q8IZS5 231 aa3.2□□□□□ -1.9
RGPD3-202ENST00000409886 SMYD1Q8NB12 490 aa3.2□□□□□ -1.9
RGPD3-202ENST00000409886 KDM1BQ8NB78 822 aa3.2□□□□□ -1.9
RGPD3-202ENST00000409886 SNX29Q8TEQ0 813 aa3.2□□□□□ -1.9
RGPD3-202ENST00000409886 PCNPQ8WW12 178 aaKnown RBP3.2□□□□□ -1.9
RGPD3-202ENST00000409886 TFAP2BQ92481 460 aa3.2□□□□□ -1.9
RGPD3-202ENST00000409886 ACDQ96AP0 544 aa3.2□□□□□ -1.9
RGPD3-202ENST00000409886 SCLYQ96I15 445 aa3.2□□□□□ -1.9
RGPD3-202ENST00000409886 BCO2Q9BYV7 579 aa3.2□□□□□ -1.9
RGPD3-202ENST00000409886 TRPV6Q9H1D0 765 aa3.2□□□□□ -1.9
RGPD3-202ENST00000409886 RPAP3Q9H6T3 665 aaPredicted RBP3.2□□□□□ -1.9
RGPD3-202ENST00000409886 VAV3Q9UKW4 847 aa3.2□□□□□ -1.9
RGPD3-202ENST00000409886 SLC6A14Q9UN76 642 aa3.2□□□□□ -1.9
RGPD3-202ENST00000409886 AP4E1Q9UPM8 1137 aa3.2□□□□□ -1.9
RGPD3-202ENST00000409886 WDR19Q8NEZ3 1342 aa3.2□□□□□ -1.9
RGPD3-202ENST00000409886 NRCAMQ92823 1304 aa3.2□□□□□ -1.9
RGPD3-202ENST00000409886 B2RBV5 119 aa3.2□□□□□ -1.9
RGPD3-202ENST00000409886 DYNC1LI2O43237 492 aaPredicted RBP3.2□□□□□ -1.9
RGPD3-202ENST00000409886 OPA1O60313 960 aa3.2□□□□□ -1.9
RGPD3-202ENST00000409886 GSTA1P08263 222 aa3.2□□□□□ -1.9
RGPD3-202ENST00000409886 POU2F2P09086 479 aa3.2□□□□□ -1.9
RGPD3-202ENST00000409886 H2AFZP0C0S5 128 aa3.2□□□□□ -1.9
RGPD3-202ENST00000409886 OR52Z1P0C646 297 aa3.2□□□□□ -1.9
RGPD3-202ENST00000409886 ARNTP27540 789 aa3.2□□□□□ -1.9
RGPD3-202ENST00000409886 CRABP2P29373 138 aa3.2□□□□□ -1.9
RGPD3-202ENST00000409886 ABCD1P33897 745 aa3.2□□□□□ -1.9
RGPD3-202ENST00000409886 CDK8P49336 464 aa3.2□□□□□ -1.9
RGPD3-202ENST00000409886 CSRP3P50461 194 aa3.2□□□□□ -1.9
RGPD3-202ENST00000409886 MARSP56192 900 aaKnown RBP3.2□□□□□ -1.9
RGPD3-202ENST00000409886 MRPS22P82650 360 aaKnown RBP3.2□□□□□ -1.9
RGPD3-202ENST00000409886 APOFQ13790 326 aa3.2□□□□□ -1.9
RGPD3-202ENST00000409886 GPNMBQ14956 572 aa3.2□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms