RNA–Protein interactions for RNA: ENST00000409783.6

PTCD3-203, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 5

Gene PTCD3, Length 587 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-203ENST00000409783 PTPRN2Q92932 1015 aa22.89■■□□□ 1.25
PTCD3-203ENST00000409783 SPON2Q9BUD6 331 aa22.89■■□□□ 1.25
PTCD3-203ENST00000409783 ATP13A1Q9HD20 1204 aa22.89■■□□□ 1.25
PTCD3-203ENST00000409783 SLC25A13Q9UJS0 675 aa22.89■■□□□ 1.25
PTCD3-203ENST00000409783 DUSP10Q9Y6W6 482 aa22.89■■□□□ 1.25
PTCD3-203ENST00000409783 SPAG17Q6Q759 2223 aa22.88■■□□□ 1.25
PTCD3-203ENST00000409783 BTNL10A8MVZ5 291 aa22.88■■□□□ 1.25
PTCD3-203ENST00000409783 BUB1BO60566 1050 aaPredicted RBP22.88■■□□□ 1.25
PTCD3-203ENST00000409783 SIN3BO75182 1162 aa22.88■■□□□ 1.25
PTCD3-203ENST00000409783 IPO7O95373 1038 aaKnown RBP22.88■■□□□ 1.25
PTCD3-203ENST00000409783 CD48P09326 243 aa22.88■■□□□ 1.25
PTCD3-203ENST00000409783 SRCP12931 536 aa22.88■■□□□ 1.25
PTCD3-203ENST00000409783 ETFBP38117 255 aa22.88■■□□□ 1.25
PTCD3-203ENST00000409783 YBEYP58557 167 aaPredicted RBP22.88■■□□□ 1.25
PTCD3-203ENST00000409783 POLD3Q15054 466 aaPredicted RBP22.88■■□□□ 1.25
PTCD3-203ENST00000409783 AFMIDQ63HM1 303 aa22.88■■□□□ 1.25
PTCD3-203ENST00000409783 LINGO4Q6UY18 593 aa22.88■■□□□ 1.25
PTCD3-203ENST00000409783 OR2T3Q8NH03 318 aa22.88■■□□□ 1.25
PTCD3-203ENST00000409783 GAB3Q8WWW8 586 aa22.88■■□□□ 1.25
PTCD3-203ENST00000409783 CSPG4P5Q96PW8 444 aa22.88■■□□□ 1.25
PTCD3-203ENST00000409783 DESI2Q9BSY9 194 aa22.88■■□□□ 1.25
PTCD3-203ENST00000409783 EPC1Q9H2F5 836 aa22.88■■□□□ 1.25
PTCD3-203ENST00000409783 LRRC19Q9H756 370 aa22.88■■□□□ 1.25
PTCD3-203ENST00000409783 BCCIPQ9P287 314 aaKnown RBP eCLIP22.88■■□□□ 1.25
PTCD3-203ENST00000409783 EDDM13A0A1B0GTR0 161 aa22.87■■□□□ 1.25
PTCD3-203ENST00000409783 CXorf51AA0A1B0GTR3 108 aa22.87■■□□□ 1.25
PTCD3-203ENST00000409783 TARSL2A2RTX5 802 aaKnown RBP22.87■■□□□ 1.25
PTCD3-203ENST00000409783 RASA4BC9J798 803 aa22.87■■□□□ 1.25
PTCD3-203ENST00000409783 H3BRJ5 948 aa22.87■■□□□ 1.25
PTCD3-203ENST00000409783 K7ERQ8 282 aa22.87■■□□□ 1.25
PTCD3-203ENST00000409783 CBX4O00257 560 aa22.87■■□□□ 1.25
PTCD3-203ENST00000409783 DCLK1O15075 740 aa22.87■■□□□ 1.25
PTCD3-203ENST00000409783 RASA4O43374 803 aa22.87■■□□□ 1.25
PTCD3-203ENST00000409783 SMAD6O43541 496 aaKnown RBP22.87■■□□□ 1.25
PTCD3-203ENST00000409783 VAV1P15498 845 aa22.87■■□□□ 1.25
PTCD3-203ENST00000409783 NOP2P46087 812 aaKnown RBP22.87■■□□□ 1.25
PTCD3-203ENST00000409783 CDH6P55285 790 aa22.87■■□□□ 1.25
PTCD3-203ENST00000409783 MAP7D1Q3KQU3 841 aa22.87■■□□□ 1.25
PTCD3-203ENST00000409783 IL31Q6EBC2 164 aa22.87■■□□□ 1.25
PTCD3-203ENST00000409783 TMPRSS6Q8IU80 811 aa22.87■■□□□ 1.25
PTCD3-203ENST00000409783 NPWQ8N729 165 aa22.87■■□□□ 1.25
PTCD3-203ENST00000409783 HMCESQ96FZ2 354 aa22.87■■□□□ 1.25
PTCD3-203ENST00000409783 ETNK2Q9NVF9 386 aa22.87■■□□□ 1.25
PTCD3-203ENST00000409783 MFHAS1Q9Y4C4 1052 aa22.87■■□□□ 1.25
PTCD3-203ENST00000409783 HYOU1Q9Y4L1 999 aa22.87■■□□□ 1.25
PTCD3-203ENST00000409783 A0A0U1RQJ8 604 aa22.86■■□□□ 1.25
PTCD3-203ENST00000409783 DAPK3O43293 454 aa22.86■■□□□ 1.25
PTCD3-203ENST00000409783 RPP40O75818 363 aaKnown RBP22.86■■□□□ 1.25
PTCD3-203ENST00000409783 KRT7P08729 469 aa22.86■■□□□ 1.25
PTCD3-203ENST00000409783 COMTP21964 271 aa22.86■■□□□ 1.25
PTCD3-203ENST00000409783 AMPD1P23109 780 aa22.86■■□□□ 1.25
PTCD3-203ENST00000409783 GJC1P36383 396 aa22.86■■□□□ 1.25
PTCD3-203ENST00000409783 NNMTP40261 264 aa22.86■■□□□ 1.25
PTCD3-203ENST00000409783 ARL4AP40617 200 aa22.86■■□□□ 1.25
PTCD3-203ENST00000409783 P2RY2P41231 377 aa22.86■■□□□ 1.25
PTCD3-203ENST00000409783 SLC1A1P43005 524 aa22.86■■□□□ 1.25
PTCD3-203ENST00000409783 NDST2P52849 883 aa22.86■■□□□ 1.25
PTCD3-203ENST00000409783 MMRN1Q13201 1228 aa22.86■■□□□ 1.25
PTCD3-203ENST00000409783 DPYSL3Q14195 570 aa22.86■■□□□ 1.25
PTCD3-203ENST00000409783 DLG2Q15700 870 aa22.86■■□□□ 1.25
PTCD3-203ENST00000409783 PARP15Q460N3 678 aa22.86■■□□□ 1.25
PTCD3-203ENST00000409783 METTL3Q86U44 580 aaKnown RBP22.86■■□□□ 1.25
PTCD3-203ENST00000409783 LRRC8AQ8IWT6 810 aa22.86■■□□□ 1.25
PTCD3-203ENST00000409783 ARHGAP12Q8IWW6 846 aa22.86■■□□□ 1.25
PTCD3-203ENST00000409783 ABCA7Q8IZY2 2146 aa22.86■■□□□ 1.25
PTCD3-203ENST00000409783 PGBD3Q8N328 593 aa22.86■■□□□ 1.25
PTCD3-203ENST00000409783 SUMF1Q8NBK3 374 aa22.86■■□□□ 1.25
PTCD3-203ENST00000409783 TPCN2Q8NHX9 752 aa22.86■■□□□ 1.25
PTCD3-203ENST00000409783 RLN3Q8WXF3 142 aa22.86■■□□□ 1.25
PTCD3-203ENST00000409783 FAM129BQ96TA1 746 aa22.86■■□□□ 1.25
PTCD3-203ENST00000409783 SLC39A8Q9C0K1 460 aa22.86■■□□□ 1.25
PTCD3-203ENST00000409783 SEMA4AQ9H3S1 761 aa22.86■■□□□ 1.25
PTCD3-203ENST00000409783 GOLPH3Q9H4A6 298 aa22.86■■□□□ 1.25
PTCD3-203ENST00000409783 FBRSQ9HAH7 460 aa22.86■■□□□ 1.25
PTCD3-203ENST00000409783 PRDM16Q9HAZ2 1276 aa22.86■■□□□ 1.25
PTCD3-203ENST00000409783 CD93Q9NPY3 652 aa22.86■■□□□ 1.25
PTCD3-203ENST00000409783 RCOR3Q9P2K3 495 aaPredicted RBP22.86■■□□□ 1.25
PTCD3-203ENST00000409783 INVSQ9Y283 1065 aa22.86■■□□□ 1.25
PTCD3-203ENST00000409783 ACTL7AQ9Y615 435 aa22.86■■□□□ 1.25
PTCD3-203ENST00000409783 ALG6Q9Y672 507 aa22.86■■□□□ 1.25
PTCD3-203ENST00000409783 KDELR3O43731 214 aa22.85■■□□□ 1.25
PTCD3-203ENST00000409783 ZNF821O75541 412 aaPredicted RBP22.85■■□□□ 1.25
PTCD3-203ENST00000409783 MRE11P49959 708 aa22.85■■□□□ 1.25
PTCD3-203ENST00000409783 SLC20A2Q08357 652 aa22.85■■□□□ 1.25
PTCD3-203ENST00000409783 SERINC3Q13530 473 aa22.85■■□□□ 1.25
PTCD3-203ENST00000409783 USP39Q53GS9 565 aaKnown RBP22.85■■□□□ 1.25
PTCD3-203ENST00000409783 LRRC38Q5VT99 294 aa22.85■■□□□ 1.25
PTCD3-203ENST00000409783 RETSATQ6NUM9 610 aa22.85■■□□□ 1.25
PTCD3-203ENST00000409783 FRMD1Q8N878 549 aa22.85■■□□□ 1.25
PTCD3-203ENST00000409783 CELF6Q96J87 481 aaKnown RBP22.85■■□□□ 1.25
PTCD3-203ENST00000409783 RSPH9Q9H1X1 276 aaPredicted RBP22.85■■□□□ 1.25
PTCD3-203ENST00000409783 KLHL11Q9NVR0 708 aa22.85■■□□□ 1.25
PTCD3-203ENST00000409783 DONSONQ9NYP3 566 aa22.85■■□□□ 1.25
PTCD3-203ENST00000409783 BUB1O43683 1085 aa22.84■■□□□ 1.25
PTCD3-203ENST00000409783 SERPINH1P50454 418 aaKnown RBP22.84■■□□□ 1.25
PTCD3-203ENST00000409783 CLCN6P51797 869 aa22.84■■□□□ 1.25
PTCD3-203ENST00000409783 RPS14P62263 151 aaKnown RBP22.84■■□□□ 1.25
PTCD3-203ENST00000409783 KRT81Q14533 505 aa22.84■■□□□ 1.25
PTCD3-203ENST00000409783 PDK2Q15119 407 aa22.84■■□□□ 1.25
PTCD3-203ENST00000409783 C11orf63Q6NUN7 778 aa22.84■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms