RNA–Protein interactions for RNA: ENST00000409593.5

PMS1-203, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 1 (best)

Gene PMS1, Length 1,668 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-203ENST00000409593 TRBV5-7A0A0A0MS05 114 aa4.48□□□□□ -1.69
PMS1-203ENST00000409593 FAM90A8PA6NJQ4 464 aa4.48□□□□□ -1.69
PMS1-203ENST00000409593 SEPT4O43236 478 aa4.48□□□□□ -1.69
PMS1-203ENST00000409593 HLA-DQA2P01906 255 aa4.48□□□□□ -1.69
PMS1-203ENST00000409593 KLKB1P03952 638 aa4.48□□□□□ -1.69
PMS1-203ENST00000409593 FAM90A13PP0C7W8 464 aa4.48□□□□□ -1.69
PMS1-203ENST00000409593 FAM90A24PP0C7X0 464 aa4.48□□□□□ -1.69
PMS1-203ENST00000409593 FCGR2AP12318 317 aa4.48□□□□□ -1.69
PMS1-203ENST00000409593 TKTP29401 623 aaKnown RBP4.48□□□□□ -1.69
PMS1-203ENST00000409593 CDKN2AP42771 156 aaKnown RBP4.48□□□□□ -1.69
PMS1-203ENST00000409593 RGS19P49795 217 aa4.48□□□□□ -1.69
PMS1-203ENST00000409593 KRT72Q14CN4 511 aa4.48□□□□□ -1.69
PMS1-203ENST00000409593 WASHC2DQ5SRD0 308 aa4.48□□□□□ -1.69
PMS1-203ENST00000409593 Q6ZTK2 550 aa4.48□□□□□ -1.69
PMS1-203ENST00000409593 CCT6BQ92526 530 aa4.48□□□□□ -1.69
PMS1-203ENST00000409593 FAM167BQ9BTA0 163 aa4.48□□□□□ -1.69
PMS1-203ENST00000409593 CADM1Q9BY67 442 aaKnown RBP4.48□□□□□ -1.69
PMS1-203ENST00000409593 RMI1Q9H9A7 625 aa4.48□□□□□ -1.69
PMS1-203ENST00000409593 KRCC1Q9NPI7 259 aaPredicted RBP4.48□□□□□ -1.69
PMS1-203ENST00000409593 G6PC2Q9NQR9 355 aa4.48□□□□□ -1.69
PMS1-203ENST00000409593 RIPOR2Q9Y4F9 1068 aa4.48□□□□□ -1.69
PMS1-203ENST00000409593 IGKV2D-30A0A075B6S6 120 aa4.48□□□□□ -1.69
PMS1-203ENST00000409593 GAGE12JA6NER3 117 aa4.48□□□□□ -1.69
PMS1-203ENST00000409593 TFRCP02786 760 aaKnown RBP4.48□□□□□ -1.69
PMS1-203ENST00000409593 CSF1P09603 554 aa4.48□□□□□ -1.69
PMS1-203ENST00000409593 TNFSF8P32971 234 aa4.48□□□□□ -1.69
PMS1-203ENST00000409593 AARSP49588 968 aaKnown RBP eCLIP4.48□□□□□ -1.69
PMS1-203ENST00000409593 THBS3P49746 956 aa4.48□□□□□ -1.69
PMS1-203ENST00000409593 ENTPD1P49961 510 aa4.48□□□□□ -1.69
PMS1-203ENST00000409593 RPS6KA3P51812 740 aa4.48□□□□□ -1.69
PMS1-203ENST00000409593 Q5PR19 223 aa4.48□□□□□ -1.69
PMS1-203ENST00000409593 SLC16A12Q6ZSM3 486 aa4.48□□□□□ -1.69
PMS1-203ENST00000409593 GALNT7Q86SF2 657 aa4.48□□□□□ -1.69
PMS1-203ENST00000409593 CAMK1DQ8IU85 385 aa4.48□□□□□ -1.69
PMS1-203ENST00000409593 AFG1LQ8WV93 481 aa4.48□□□□□ -1.69
PMS1-203ENST00000409593 THAP4Q8WY91 577 aa4.48□□□□□ -1.69
PMS1-203ENST00000409593 ARPC5LQ9BPX5 153 aa4.48□□□□□ -1.69
PMS1-203ENST00000409593 SF3B5Q9BWJ5 86 aaKnown RBP4.48□□□□□ -1.69
PMS1-203ENST00000409593 B3GNT4Q9C0J1 378 aa4.48□□□□□ -1.69
PMS1-203ENST00000409593 CHODLQ9H9P2 273 aa4.48□□□□□ -1.69
PMS1-203ENST00000409593 SLC22A11Q9NSA0 550 aa4.48□□□□□ -1.69
PMS1-203ENST00000409593 THAP1Q9NVV9 213 aa4.48□□□□□ -1.69
PMS1-203ENST00000409593 NCKIPSDQ9NZQ3 722 aa4.48□□□□□ -1.69
PMS1-203ENST00000409593 UPB1Q9UBR1 384 aa4.48□□□□□ -1.69
PMS1-203ENST00000409593 SLC4A4Q9Y6R1 1079 aa4.48□□□□□ -1.69
PMS1-203ENST00000409593 NBNO60934 754 aa4.47□□□□□ -1.69
PMS1-203ENST00000409593 TMCC1O94876 653 aa4.47□□□□□ -1.69
PMS1-203ENST00000409593 CYP1A2P05177 515 aa4.47□□□□□ -1.69
PMS1-203ENST00000409593 PNPLA4P41247 253 aa4.47□□□□□ -1.69
PMS1-203ENST00000409593 MCM2P49736 904 aa4.47□□□□□ -1.69
PMS1-203ENST00000409593 PGGT1BP53609 377 aa4.47□□□□□ -1.69
PMS1-203ENST00000409593 NANOS2P60321 138 aaKnown RBP4.47□□□□□ -1.69
PMS1-203ENST00000409593 GPR18Q14330 331 aa4.47□□□□□ -1.69
PMS1-203ENST00000409593 SEMA3AQ14563 771 aa4.47□□□□□ -1.69
PMS1-203ENST00000409593 PLK5Q496M5 336 aa4.47□□□□□ -1.69
PMS1-203ENST00000409593 FAM83BQ5T0W9 1011 aa4.47□□□□□ -1.69
PMS1-203ENST00000409593 BRSK2Q8IWQ3 736 aa4.47□□□□□ -1.69
PMS1-203ENST00000409593 OIT3Q8WWZ8 545 aa4.47□□□□□ -1.69
PMS1-203ENST00000409593 KTI12Q96EK9 354 aaPredicted RBP4.47□□□□□ -1.69
PMS1-203ENST00000409593 RBM17Q96I25 401 aaKnown RBP4.47□□□□□ -1.69
PMS1-203ENST00000409593 LYZL4Q96KX0 146 aa4.47□□□□□ -1.69
PMS1-203ENST00000409593 HERC2P3Q9BVR0 1158 aa4.47□□□□□ -1.69
PMS1-203ENST00000409593 POLDIP3Q9BY77 421 aaKnown RBP4.47□□□□□ -1.69
PMS1-203ENST00000409593 XRN2Q9H0D6 950 aaKnown RBP eCLIP4.47□□□□□ -1.69
PMS1-203ENST00000409593 MYLK2Q9H1R3 596 aa4.47□□□□□ -1.69
PMS1-203ENST00000409593 PTPRHQ9HD43 1115 aa4.47□□□□□ -1.69
PMS1-203ENST00000409593 KIF17Q9P2E2 1029 aa4.47□□□□□ -1.69
PMS1-203ENST00000409593 CDH22Q9UJ99 828 aa4.47□□□□□ -1.69
PMS1-203ENST00000409593 TMEM247A6NEH6 219 aa4.46□□□□□ -1.7
PMS1-203ENST00000409593 LACTBL1A8MY62 500 aa4.46□□□□□ -1.7
PMS1-203ENST00000409593 AVPR2P30518 371 aa4.46□□□□□ -1.7
PMS1-203ENST00000409593 ADD2P35612 726 aa4.46□□□□□ -1.7
PMS1-203ENST00000409593 KCNJ4P48050 445 aa4.46□□□□□ -1.7
PMS1-203ENST00000409593 ZNF484Q5JVG2 852 aa4.46□□□□□ -1.7
PMS1-203ENST00000409593 LCE1AQ5T7P2 110 aa4.46□□□□□ -1.7
PMS1-203ENST00000409593 VWA5B1Q5TIE3 1220 aa4.46□□□□□ -1.7
PMS1-203ENST00000409593 ANO1Q5XXA6 986 aa4.46□□□□□ -1.7
PMS1-203ENST00000409593 HORMAD2Q8N7B1 307 aa4.46□□□□□ -1.7
PMS1-203ENST00000409593 LINS1Q8NG48 757 aa4.46□□□□□ -1.7
PMS1-203ENST00000409593 RILPL2Q969X0 211 aa4.46□□□□□ -1.7
PMS1-203ENST00000409593 MARK4Q96L34 752 aa4.46□□□□□ -1.7
PMS1-203ENST00000409593 WDR77Q9BQA1 342 aaPredicted RBP4.46□□□□□ -1.7
PMS1-203ENST00000409593 HIPK2Q9H2X6 1198 aa4.46□□□□□ -1.7
PMS1-203ENST00000409593 ZDHHC7Q9NXF8 308 aa4.46□□□□□ -1.7
PMS1-203ENST00000409593 PLEKHB1Q9UF11 243 aaPredicted RBP4.46□□□□□ -1.7
PMS1-203ENST00000409593 SAC3D1A6NKF1 404 aa4.45□□□□□ -1.7
PMS1-203ENST00000409593 STRNO43815 780 aa4.45□□□□□ -1.7
PMS1-203ENST00000409593 TCEA3O75764 348 aa4.45□□□□□ -1.7
PMS1-203ENST00000409593 CBX6O95503 412 aa4.45□□□□□ -1.7
PMS1-203ENST00000409593 T-ENOLP0DO92 83 aa4.45□□□□□ -1.7
PMS1-203ENST00000409593 CPA1P15085 419 aa4.45□□□□□ -1.7
PMS1-203ENST00000409593 CHRNB2P17787 502 aa4.45□□□□□ -1.7
PMS1-203ENST00000409593 RXRAP19793 462 aa4.45□□□□□ -1.7
PMS1-203ENST00000409593 HOXA11P31270 313 aaPredicted RBP4.45□□□□□ -1.7
PMS1-203ENST00000409593 ARRB2P32121 409 aa4.45□□□□□ -1.7
PMS1-203ENST00000409593 GRK6P43250 576 aa4.45□□□□□ -1.7
PMS1-203ENST00000409593 RFX2P48378 723 aa4.45□□□□□ -1.7
PMS1-203ENST00000409593 THOC5Q13769 683 aaKnown RBP4.45□□□□□ -1.7
PMS1-203ENST00000409593 TAF5Q15542 800 aa4.45□□□□□ -1.7
PMS1-203ENST00000409593 GRAMD1BQ3KR37 738 aa4.45□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms