RNA–Protein interactions for RNA: ENST00000409542.5

CHRNA1-205, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 3 BASIC

Gene CHRNA1, Length 1,460 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-205ENST00000409542 SPATA4Q8NEY3 305 aa13.15□□□□□ -0.3
CHRNA1-205ENST00000409542 COG1Q8WTW3 980 aa13.15□□□□□ -0.3
CHRNA1-205ENST00000409542 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.15□□□□□ -0.3
CHRNA1-205ENST00000409542 BTBD1Q9H0C5 482 aa13.15□□□□□ -0.3
CHRNA1-205ENST00000409542 CYP3A43Q9HB55 503 aa13.15□□□□□ -0.3
CHRNA1-205ENST00000409542 ABCB8Q9NUT2 735 aa13.15□□□□□ -0.3
CHRNA1-205ENST00000409542 ADAMTS1Q9UHI8 967 aa13.15□□□□□ -0.3
CHRNA1-205ENST00000409542 SFMBT1Q9UHJ3 866 aa13.15□□□□□ -0.3
CHRNA1-205ENST00000409542 INTUQ9ULD6 942 aa13.15□□□□□ -0.3
CHRNA1-205ENST00000409542 FRMD4BQ9Y2L6 1034 aa13.15□□□□□ -0.3
CHRNA1-205ENST00000409542 GRID2IPA4D2P6 1211 aa13.14□□□□□ -0.31
CHRNA1-205ENST00000409542 H3BQF6 201 aa13.14□□□□□ -0.31
CHRNA1-205ENST00000409542 WNT9AO14904 365 aa13.14□□□□□ -0.31
CHRNA1-205ENST00000409542 CD27P26842 260 aa13.14□□□□□ -0.31
CHRNA1-205ENST00000409542 STAT1P42224 750 aa13.14□□□□□ -0.31
CHRNA1-205ENST00000409542 FMO5P49326 533 aa13.14□□□□□ -0.31
CHRNA1-205ENST00000409542 VAMP7P51809 220 aa13.14□□□□□ -0.31
CHRNA1-205ENST00000409542 PTK2Q05397 1052 aa13.14□□□□□ -0.31
CHRNA1-205ENST00000409542 MPPE1Q53F39 396 aa13.14□□□□□ -0.31
CHRNA1-205ENST00000409542 GLE1Q53GS7 698 aaKnown RBP13.14□□□□□ -0.31
CHRNA1-205ENST00000409542 MEI1Q5TIA1 1274 aa13.14□□□□□ -0.31
CHRNA1-205ENST00000409542 CCDC181Q5TID7 509 aa13.14□□□□□ -0.31
CHRNA1-205ENST00000409542 VPS36Q86VN1 386 aa13.14□□□□□ -0.31
CHRNA1-205ENST00000409542 SLC4A11Q8NBS3 891 aa13.14□□□□□ -0.31
CHRNA1-205ENST00000409542 SLC39A7Q92504 469 aa13.14□□□□□ -0.31
CHRNA1-205ENST00000409542 HEXIM2Q96MH2 286 aaKnown RBP13.14□□□□□ -0.31
CHRNA1-205ENST00000409542 SLC6A18Q96N87 628 aa13.14□□□□□ -0.31
CHRNA1-205ENST00000409542 UBL7Q96S82 380 aaPredicted RBP13.14□□□□□ -0.31
CHRNA1-205ENST00000409542 CDK5RAP1Q96SZ6 601 aaKnown RBP13.14□□□□□ -0.31
CHRNA1-205ENST00000409542 PRORYQ9H606 182 aa13.14□□□□□ -0.31
CHRNA1-205ENST00000409542 FTSJ1Q9UET6 329 aa13.14□□□□□ -0.31
CHRNA1-205ENST00000409542 SERGEFQ9UGK8 458 aa13.14□□□□□ -0.31
CHRNA1-205ENST00000409542 MYLKQ15746 1914 aa13.13□□□□□ -0.31
CHRNA1-205ENST00000409542 A0A0A6YYK5 440 aaPredicted RBP13.13□□□□□ -0.31
CHRNA1-205ENST00000409542 A0A1B0GTQ1 180 aa13.13□□□□□ -0.31
CHRNA1-205ENST00000409542 POLR3GO15318 223 aaPredicted RBP13.13□□□□□ -0.31
CHRNA1-205ENST00000409542 PAPSS1O43252 624 aaPredicted RBP13.13□□□□□ -0.31
CHRNA1-205ENST00000409542 BUB1O43683 1085 aa13.13□□□□□ -0.31
CHRNA1-205ENST00000409542 PALMO75781 387 aa13.13□□□□□ -0.31
CHRNA1-205ENST00000409542 TNFRSF8P28908 595 aa13.13□□□□□ -0.31
CHRNA1-205ENST00000409542 CD70P32970 193 aa13.13□□□□□ -0.31
CHRNA1-205ENST00000409542 EIF2S3P41091 472 aaKnown RBP13.13□□□□□ -0.31
CHRNA1-205ENST00000409542 NAP1L1P55209 391 aaKnown RBP13.13□□□□□ -0.31
CHRNA1-205ENST00000409542 MBLAC2Q68D91 279 aa13.13□□□□□ -0.31
CHRNA1-205ENST00000409542 PM20D1Q6GTS8 502 aa13.13□□□□□ -0.31
CHRNA1-205ENST00000409542 TMPRSS12Q86WS5 348 aa13.13□□□□□ -0.31
CHRNA1-205ENST00000409542 SEMA4DQ92854 862 aa13.13□□□□□ -0.31
CHRNA1-205ENST00000409542 PLD4Q96BZ4 506 aa13.13□□□□□ -0.31
CHRNA1-205ENST00000409542 MYO19Q96H55 970 aa13.13□□□□□ -0.31
CHRNA1-205ENST00000409542 STK33Q9BYT3 514 aa13.13□□□□□ -0.31
CHRNA1-205ENST00000409542 NIF3L1Q9GZT8 377 aa13.13□□□□□ -0.31
CHRNA1-205ENST00000409542 MED4Q9NPJ6 270 aa13.13□□□□□ -0.31
CHRNA1-205ENST00000409542 GGA2Q9UJY4 613 aa13.13□□□□□ -0.31
CHRNA1-205ENST00000409542 STRIP2Q9ULQ0 834 aa13.13□□□□□ -0.31
CHRNA1-205ENST00000409542 PLA2G4CQ9UP65 541 aa13.13□□□□□ -0.31
CHRNA1-205ENST00000409542 MGAQ8IWI9 3026 aa13.13□□□□□ -0.31
CHRNA1-205ENST00000409542 GOLGA6L7A0A1B0GV03 622 aa13.12□□□□□ -0.31
CHRNA1-205ENST00000409542 FAM47DPA6NHR8 397 aa13.12□□□□□ -0.31
CHRNA1-205ENST00000409542 DNTTP04053 509 aa13.12□□□□□ -0.31
CHRNA1-205ENST00000409542 PABPC1P11940 636 aaKnown RBP13.12□□□□□ -0.31
CHRNA1-205ENST00000409542 TKTL1P51854 596 aa13.12□□□□□ -0.31
CHRNA1-205ENST00000409542 RAD23BP54727 409 aa13.12□□□□□ -0.31
CHRNA1-205ENST00000409542 SEMG2Q02383 582 aa13.12□□□□□ -0.31
CHRNA1-205ENST00000409542 C19orf57Q0VDD7 668 aa13.12□□□□□ -0.31
CHRNA1-205ENST00000409542 KIAA0895LQ68EN5 471 aa13.12□□□□□ -0.31
CHRNA1-205ENST00000409542 ADAT2Q7Z6V5 191 aaKnown RBP13.12□□□□□ -0.31
CHRNA1-205ENST00000409542 DDX51Q8N8A6 666 aaKnown RBP eCLIP13.12□□□□□ -0.31
CHRNA1-205ENST00000409542 FAM71BQ8TC56 605 aa13.12□□□□□ -0.31
CHRNA1-205ENST00000409542 EDEM1Q92611 657 aa13.12□□□□□ -0.31
CHRNA1-205ENST00000409542 TMA16Q96EY4 203 aaKnown RBP13.12□□□□□ -0.31
CHRNA1-205ENST00000409542 PACSIN1Q9BY11 444 aa13.12□□□□□ -0.31
CHRNA1-205ENST00000409542 ULBP1Q9BZM6 244 aa13.12□□□□□ -0.31
CHRNA1-205ENST00000409542 PSD3Q9NYI0 1048 aa13.12□□□□□ -0.31
CHRNA1-205ENST00000409542 AJAP1Q9UKB5 411 aaPredicted RBP13.12□□□□□ -0.31
CHRNA1-205ENST00000409542 COL5A1P20908 1838 aaPredicted RBP13.12□□□□□ -0.31
CHRNA1-205ENST00000409542 CFAP46Q8IYW2 2715 aa13.12□□□□□ -0.31
CHRNA1-205ENST00000409542 A0A1W2PPC4 97 aa13.11□□□□□ -0.31
CHRNA1-205ENST00000409542 VILLO15195 856 aa13.11□□□□□ -0.31
CHRNA1-205ENST00000409542 MAPK13O15264 365 aa13.11□□□□□ -0.31
CHRNA1-205ENST00000409542 MSI1O43347 362 aaKnown RBP13.11□□□□□ -0.31
CHRNA1-205ENST00000409542 JUPP14923 745 aa13.11□□□□□ -0.31
CHRNA1-205ENST00000409542 SOX5P35711 763 aa13.11□□□□□ -0.31
CHRNA1-205ENST00000409542 BCAT1P54687 386 aa13.11□□□□□ -0.31
CHRNA1-205ENST00000409542 GALCP54803 685 aa13.11□□□□□ -0.31
CHRNA1-205ENST00000409542 MCCD1P59942 119 aaPredicted RBP13.11□□□□□ -0.31
CHRNA1-205ENST00000409542 TARDBPQ13148 414 aaKnown RBP eCLIP13.11□□□□□ -0.31
CHRNA1-205ENST00000409542 E2F5Q15329 346 aa13.11□□□□□ -0.31
CHRNA1-205ENST00000409542 ALKBH5Q6P6C2 394 aaKnown RBP13.11□□□□□ -0.31
CHRNA1-205ENST00000409542 RFWD3Q6PCD5 774 aa13.11□□□□□ -0.31
CHRNA1-205ENST00000409542 ARHGAP18Q8N392 663 aa13.11□□□□□ -0.31
CHRNA1-205ENST00000409542 SAP25Q8TEE9 199 aa13.11□□□□□ -0.31
CHRNA1-205ENST00000409542 WFIKKN2Q8TEU8 576 aa13.11□□□□□ -0.31
CHRNA1-205ENST00000409542 AENQ8WTP8 325 aaKnown RBP13.11□□□□□ -0.31
CHRNA1-205ENST00000409542 TATDN2Q93075 761 aa13.11□□□□□ -0.31
CHRNA1-205ENST00000409542 MYEOVQ96EZ4 313 aa13.11□□□□□ -0.31
CHRNA1-205ENST00000409542 CNDP2Q96KP4 475 aaKnown RBP13.11□□□□□ -0.31
CHRNA1-205ENST00000409542 LMLNQ96KR4 655 aa13.11□□□□□ -0.31
CHRNA1-205ENST00000409542 ELF4Q99607 663 aaPredicted RBP13.11□□□□□ -0.31
CHRNA1-205ENST00000409542 INTS2Q9H0H0 1204 aaKnown RBP13.11□□□□□ -0.31
CHRNA1-205ENST00000409542 SGK2Q9HBY8 427 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms