RNA–Protein interactions for RNA: ENST00000409219.5

CHRNA1-203, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 3 BASIC

Gene CHRNA1, Length 1,466 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-203ENST00000409219 UBAP2LQ14157 1087 aaKnown RBP13.23□□□□□ -0.29
CHRNA1-203ENST00000409219 TGIF1Q15583 401 aa13.23□□□□□ -0.29
CHRNA1-203ENST00000409219 PERM1Q5SV97 790 aa13.23□□□□□ -0.29
CHRNA1-203ENST00000409219 PIP5KL1Q5T9C9 394 aa13.23□□□□□ -0.29
CHRNA1-203ENST00000409219 OR6B2Q6IFH4 312 aa13.23□□□□□ -0.29
CHRNA1-203ENST00000409219 USP53Q70EK8 1073 aa13.23□□□□□ -0.29
CHRNA1-203ENST00000409219 ABI3BPQ7Z7G0 1075 aa13.23□□□□□ -0.29
CHRNA1-203ENST00000409219 GRAMD1CQ8IYS0 662 aa13.23□□□□□ -0.29
CHRNA1-203ENST00000409219 UBA3Q8TBC4 463 aa13.23□□□□□ -0.29
CHRNA1-203ENST00000409219 CLEC4CQ8WTT0 213 aa13.23□□□□□ -0.29
CHRNA1-203ENST00000409219 KCTD13Q8WZ19 329 aa13.23□□□□□ -0.29
CHRNA1-203ENST00000409219 SEMA3CQ99985 751 aa13.23□□□□□ -0.29
CHRNA1-203ENST00000409219 TMEM8AQ9HCN3 771 aa13.23□□□□□ -0.29
CHRNA1-203ENST00000409219 GPR27Q9NS67 375 aa13.23□□□□□ -0.29
CHRNA1-203ENST00000409219 HESX1Q9UBX0 185 aa13.23□□□□□ -0.29
CHRNA1-203ENST00000409219 XPO7Q9UIA9 1087 aaKnown RBP13.23□□□□□ -0.29
CHRNA1-203ENST00000409219 PPM1HQ9ULR3 514 aa13.23□□□□□ -0.29
CHRNA1-203ENST00000409219 SCN8AQ9UQD0 1980 aa13.23□□□□□ -0.29
CHRNA1-203ENST00000409219 NBASA2RRP1 2371 aa13.23□□□□□ -0.29
CHRNA1-203ENST00000409219 CCDC187A0A096LP49 1063 aa13.23□□□□□ -0.29
CHRNA1-203ENST00000409219 C1QTNF3-AMACRE9PGA6 284 aa13.23□□□□□ -0.29
CHRNA1-203ENST00000409219 PIK3R2O00459 728 aa13.23□□□□□ -0.29
CHRNA1-203ENST00000409219 SPTLC2O15270 562 aa13.23□□□□□ -0.29
CHRNA1-203ENST00000409219 POLR2DO15514 142 aaKnown RBP13.23□□□□□ -0.29
CHRNA1-203ENST00000409219 NOBOXO60393 691 aa13.23□□□□□ -0.29
CHRNA1-203ENST00000409219 PPP6R2O75170 966 aa13.23□□□□□ -0.29
CHRNA1-203ENST00000409219 MOCS2O96007 188 aaPredicted RBP13.23□□□□□ -0.29
CHRNA1-203ENST00000409219 LTFP02788 710 aa13.23□□□□□ -0.29
CHRNA1-203ENST00000409219 SETSIPP0DME0 302 aa13.23□□□□□ -0.29
CHRNA1-203ENST00000409219 NME1P15531 152 aaKnown RBP13.23□□□□□ -0.29
CHRNA1-203ENST00000409219 PDGFRAP16234 1089 aa13.23□□□□□ -0.29
CHRNA1-203ENST00000409219 SYT1P21579 422 aa13.23□□□□□ -0.29
CHRNA1-203ENST00000409219 AKT2P31751 481 aa13.23□□□□□ -0.29
CHRNA1-203ENST00000409219 NOTCH2Q04721 2471 aa13.23□□□□□ -0.29
CHRNA1-203ENST00000409219 ZNF284Q2VY69 593 aa13.23□□□□□ -0.29
CHRNA1-203ENST00000409219 Q6ZVU0 165 aa13.23□□□□□ -0.29
CHRNA1-203ENST00000409219 INTS8Q75QN2 995 aaKnown RBP13.23□□□□□ -0.29
CHRNA1-203ENST00000409219 PTAR1Q7Z6K3 402 aaPredicted RBP13.23□□□□□ -0.29
CHRNA1-203ENST00000409219 HORMAD1Q86X24 394 aa13.23□□□□□ -0.29
CHRNA1-203ENST00000409219 TPCN2Q8NHX9 752 aa13.23□□□□□ -0.29
CHRNA1-203ENST00000409219 SLC39A13Q96H72 371 aa13.23□□□□□ -0.29
CHRNA1-203ENST00000409219 FAXDC2Q96IV6 333 aa13.23□□□□□ -0.29
CHRNA1-203ENST00000409219 TRPM6Q9BX84 2022 aa13.23□□□□□ -0.29
CHRNA1-203ENST00000409219 ALOX15BO15296 676 aa13.22□□□□□ -0.29
CHRNA1-203ENST00000409219 GJB6O95452 261 aa13.22□□□□□ -0.29
CHRNA1-203ENST00000409219 PDIA4P13667 645 aaKnown RBP13.22□□□□□ -0.29
CHRNA1-203ENST00000409219 CR2P20023 1033 aa13.22□□□□□ -0.29
CHRNA1-203ENST00000409219 SLC5A2P31639 672 aa13.22□□□□□ -0.29
CHRNA1-203ENST00000409219 RGS7P49802 495 aa13.22□□□□□ -0.29
CHRNA1-203ENST00000409219 SULT2A1Q06520 285 aa13.22□□□□□ -0.29
CHRNA1-203ENST00000409219 FZD2Q14332 565 aa13.22□□□□□ -0.29
CHRNA1-203ENST00000409219 RAP1GAP2Q684P5 730 aa13.22□□□□□ -0.29
CHRNA1-203ENST00000409219 CIR1Q86X95 450 aaPredicted RBP13.22□□□□□ -0.29
CHRNA1-203ENST00000409219 LGI2Q8N0V4 545 aa13.22□□□□□ -0.29
CHRNA1-203ENST00000409219 DQX1Q8TE96 717 aaKnown RBP13.22□□□□□ -0.29
CHRNA1-203ENST00000409219 IRGQQ8WZA9 623 aa13.22□□□□□ -0.29
CHRNA1-203ENST00000409219 EEF2KMTQ96G04 330 aa13.22□□□□□ -0.29
CHRNA1-203ENST00000409219 EXOC1Q9NV70 894 aa13.22□□□□□ -0.29
CHRNA1-203ENST00000409219 ZFR2Q9UPR6 939 aaKnown RBP13.22□□□□□ -0.29
CHRNA1-203ENST00000409219 TRAF3IP3Q9Y228 551 aa13.22□□□□□ -0.29
CHRNA1-203ENST00000409219 TLR6Q9Y2C9 796 aa13.22□□□□□ -0.29
CHRNA1-203ENST00000409219 CLEC18AA5D8T8 446 aa13.21□□□□□ -0.3
CHRNA1-203ENST00000409219 A6NNZ2 444 aa13.21□□□□□ -0.3
CHRNA1-203ENST00000409219 O00370 1275 aa13.21□□□□□ -0.3
CHRNA1-203ENST00000409219 PLD2O14939 933 aa13.21□□□□□ -0.3
CHRNA1-203ENST00000409219 MCF2LO15068 1137 aa13.21□□□□□ -0.3
CHRNA1-203ENST00000409219 ATP9BO43861 1147 aa13.21□□□□□ -0.3
CHRNA1-203ENST00000409219 PPFIA2O75334 1257 aa13.21□□□□□ -0.3
CHRNA1-203ENST00000409219 CSF2P04141 144 aa13.21□□□□□ -0.3
CHRNA1-203ENST00000409219 CTSLP07711 333 aa13.21□□□□□ -0.3
CHRNA1-203ENST00000409219 CD19P15391 556 aa13.21□□□□□ -0.3
CHRNA1-203ENST00000409219 NR2F2P24468 414 aa13.21□□□□□ -0.3
CHRNA1-203ENST00000409219 NNTQ13423 1086 aa13.21□□□□□ -0.3
CHRNA1-203ENST00000409219 SLC12A1Q13621 1099 aa13.21□□□□□ -0.3
CHRNA1-203ENST00000409219 DEFB133Q30KQ1 61 aa13.21□□□□□ -0.3
CHRNA1-203ENST00000409219 KRT39Q6A163 491 aa13.21□□□□□ -0.3
CHRNA1-203ENST00000409219 NEK5Q6P3R8 708 aa13.21□□□□□ -0.3
CHRNA1-203ENST00000409219 CLEC18BQ6UXF7 455 aa13.21□□□□□ -0.3
CHRNA1-203ENST00000409219 Q6ZSR6 202 aa13.21□□□□□ -0.3
CHRNA1-203ENST00000409219 CHSY1Q86X52 802 aa13.21□□□□□ -0.3
CHRNA1-203ENST00000409219 CLEC18CQ8NCF0 446 aa13.21□□□□□ -0.3
CHRNA1-203ENST00000409219 LIN37Q96GY3 246 aaPredicted RBP13.21□□□□□ -0.3
CHRNA1-203ENST00000409219 SERPINB11Q96P15 392 aa13.21□□□□□ -0.3
CHRNA1-203ENST00000409219 NCKIPSDQ9NZQ3 722 aa13.21□□□□□ -0.3
CHRNA1-203ENST00000409219 KLF15Q9UIH9 416 aa13.21□□□□□ -0.3
CHRNA1-203ENST00000409219 ACSL6Q9UKU0 697 aa13.21□□□□□ -0.3
CHRNA1-203ENST00000409219 MTMR6Q9Y217 621 aa13.21□□□□□ -0.3
CHRNA1-203ENST00000409219 PCDHGA7Q9Y5G6 932 aa13.21□□□□□ -0.3
CHRNA1-203ENST00000409219 CSNK1G3Q9Y6M4 447 aa13.21□□□□□ -0.3
CHRNA1-203ENST00000409219 H3BM21 787 aa13.2□□□□□ -0.3
CHRNA1-203ENST00000409219 RIOK3O14730 519 aaKnown RBP13.2□□□□□ -0.3
CHRNA1-203ENST00000409219 MUSKO15146 869 aa13.2□□□□□ -0.3
CHRNA1-203ENST00000409219 AQP9O43315 295 aa13.2□□□□□ -0.3
CHRNA1-203ENST00000409219 CUTAO60888 179 aa13.2□□□□□ -0.3
CHRNA1-203ENST00000409219 FYNP06241 537 aa13.2□□□□□ -0.3
CHRNA1-203ENST00000409219 SFTPCP11686 197 aa13.2□□□□□ -0.3
CHRNA1-203ENST00000409219 KRT13P13646 458 aa13.2□□□□□ -0.3
CHRNA1-203ENST00000409219 TACR2P21452 398 aa13.2□□□□□ -0.3
CHRNA1-203ENST00000409219 MXI1P50539 228 aa13.2□□□□□ -0.3
CHRNA1-203ENST00000409219 VASPP50552 380 aaPredicted RBP13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms