RNA–Protein interactions for RNA: ENST00000409096.5

CUL3-203, Transcript of cullin 3, humanhuman

TSL 1 (best) BASIC

Gene CUL3, Length 2,701 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL3-203ENST00000409096 PEMTQ9UBM1 199 aa2.97□□□□□ -1.93
CUL3-203ENST00000409096 PIAS3Q9Y6X2 628 aa2.97□□□□□ -1.93
CUL3-203ENST00000409096 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP2.96□□□□□ -1.94
CUL3-203ENST00000409096 CCDC196A0A1B0GTZ2 297 aa2.96□□□□□ -1.94
CUL3-203ENST00000409096 PABPN1LA6NDY0 278 aaKnown RBP2.96□□□□□ -1.94
CUL3-203ENST00000409096 PGPEP1LA6NFU8 196 aa2.96□□□□□ -1.94
CUL3-203ENST00000409096 LDLRAD4O15165 306 aa2.96□□□□□ -1.94
CUL3-203ENST00000409096 USP12O75317 370 aa2.96□□□□□ -1.94
CUL3-203ENST00000409096 NFATC1O95644 943 aa2.96□□□□□ -1.94
CUL3-203ENST00000409096 EPHA8P29322 1005 aaPredicted RBP2.96□□□□□ -1.94
CUL3-203ENST00000409096 GJC1P36383 396 aa2.96□□□□□ -1.94
CUL3-203ENST00000409096 PAFAH1B1P43034 410 aa2.96□□□□□ -1.94
CUL3-203ENST00000409096 CDH15P55291 814 aa2.96□□□□□ -1.94
CUL3-203ENST00000409096 C1QTNF8P60827 252 aa2.96□□□□□ -1.94
CUL3-203ENST00000409096 DCTN2Q13561 401 aaKnown RBP2.96□□□□□ -1.94
CUL3-203ENST00000409096 SLC9B1Q4ZJI4 515 aa2.96□□□□□ -1.94
CUL3-203ENST00000409096 ZNF766Q5HY98 468 aa2.96□□□□□ -1.94
CUL3-203ENST00000409096 CEP78Q5JTW2 689 aa2.96□□□□□ -1.94
CUL3-203ENST00000409096 MOB3CQ70IA8 216 aa2.96□□□□□ -1.94
CUL3-203ENST00000409096 AMER2Q8N7J2 671 aa2.96□□□□□ -1.94
CUL3-203ENST00000409096 CENPIQ92674 756 aaPredicted RBP2.96□□□□□ -1.94
CUL3-203ENST00000409096 MAP4K1Q92918 833 aa2.96□□□□□ -1.94
CUL3-203ENST00000409096 P2RY11Q96G91 374 aa2.96□□□□□ -1.94
CUL3-203ENST00000409096 CENPOQ9BU64 300 aa2.96□□□□□ -1.94
CUL3-203ENST00000409096 TTC12Q9H892 705 aaPredicted RBP2.96□□□□□ -1.94
CUL3-203ENST00000409096 HSPB7Q9UBY9 170 aa2.96□□□□□ -1.94
CUL3-203ENST00000409096 DTX4Q9Y2E6 619 aa2.96□□□□□ -1.94
CUL3-203ENST00000409096 COL11A2P13942 1736 aaPredicted RBP2.96□□□□□ -1.94
CUL3-203ENST00000409096 CEP104O60308 925 aa2.96□□□□□ -1.94
CUL3-203ENST00000409096 TULP3O75386 442 aa2.96□□□□□ -1.94
CUL3-203ENST00000409096 CHRM5P08912 532 aaPredicted RBP2.96□□□□□ -1.94
CUL3-203ENST00000409096 RPS6KB1P23443 525 aa2.96□□□□□ -1.94
CUL3-203ENST00000409096 POLD2P49005 469 aa2.96□□□□□ -1.94
CUL3-203ENST00000409096 INHBCP55103 352 aa2.96□□□□□ -1.94
CUL3-203ENST00000409096 UFM1P61960 85 aa2.96□□□□□ -1.94
CUL3-203ENST00000409096 DPTQ07507 201 aa2.96□□□□□ -1.94
CUL3-203ENST00000409096 FOXD4Q12950 439 aaPredicted RBP2.96□□□□□ -1.94
CUL3-203ENST00000409096 C16orf71Q8IYS4 520 aaPredicted RBP2.96□□□□□ -1.94
CUL3-203ENST00000409096 C8orf58Q8NAV2 365 aa2.96□□□□□ -1.94
CUL3-203ENST00000409096 RAB40AQ8WXH6 277 aa2.96□□□□□ -1.94
CUL3-203ENST00000409096 DPF1Q92782 380 aa2.96□□□□□ -1.94
CUL3-203ENST00000409096 KIF1BPQ96EK5 621 aa2.96□□□□□ -1.94
CUL3-203ENST00000409096 CHFRQ96EP1 664 aa2.96□□□□□ -1.94
CUL3-203ENST00000409096 GLIS2Q9BZE0 524 aaPredicted RBP2.96□□□□□ -1.94
CUL3-203ENST00000409096 AAMDCQ9H7C9 122 aa2.96□□□□□ -1.94
CUL3-203ENST00000409096 MOV10Q9HCE1 1003 aaKnown RBP2.96□□□□□ -1.94
CUL3-203ENST00000409096 BEX4Q9NWD9 120 aaPredicted RBP2.96□□□□□ -1.94
CUL3-203ENST00000409096 CTNNAL1Q9UBT7 734 aa2.96□□□□□ -1.94
CUL3-203ENST00000409096 SARDHQ9UL12 918 aa2.96□□□□□ -1.94
CUL3-203ENST00000409096 SPATA31A5Q5VU36 1347 aa2.95□□□□□ -1.94
CUL3-203ENST00000409096 SPATA31A6Q5VVP1 1343 aa2.95□□□□□ -1.94
CUL3-203ENST00000409096 SPATA31A7Q8IWB4 1347 aa2.95□□□□□ -1.94
CUL3-203ENST00000409096 DYTNA2CJ06 578 aa2.95□□□□□ -1.94
CUL3-203ENST00000409096 WIPF3A6NGB9 483 aa2.95□□□□□ -1.94
CUL3-203ENST00000409096 NPIPB15A6NHN6 443 aaPredicted RBP2.95□□□□□ -1.94
CUL3-203ENST00000409096 INPPL1O15357 1258 aa2.95□□□□□ -1.94
CUL3-203ENST00000409096 MSI1O43347 362 aaKnown RBP2.95□□□□□ -1.94
CUL3-203ENST00000409096 ADAP00813 363 aa2.95□□□□□ -1.94
CUL3-203ENST00000409096 WNT1P04628 370 aa2.95□□□□□ -1.94
CUL3-203ENST00000409096 MPGP29372 298 aa2.95□□□□□ -1.94
CUL3-203ENST00000409096 TUBA4AP68366 448 aa2.95□□□□□ -1.94
CUL3-203ENST00000409096 EFNB1P98172 346 aa2.95□□□□□ -1.94
CUL3-203ENST00000409096 CAMK1Q14012 370 aa2.95□□□□□ -1.94
CUL3-203ENST00000409096 ERV3-1Q14264 604 aa2.95□□□□□ -1.94
CUL3-203ENST00000409096 GALNT3Q14435 633 aa2.95□□□□□ -1.94
CUL3-203ENST00000409096 ZNF268Q14587 947 aaPredicted RBP2.95□□□□□ -1.94
CUL3-203ENST00000409096 CERKLQ49MI3 558 aaPredicted RBP2.95□□□□□ -1.94
CUL3-203ENST00000409096 FAM171A1Q5VUB5 890 aa2.95□□□□□ -1.94
CUL3-203ENST00000409096 C17orf99Q6UX52 265 aa2.95□□□□□ -1.94
CUL3-203ENST00000409096 ZNF788Q6ZQV5 615 aa2.95□□□□□ -1.94
CUL3-203ENST00000409096 TRIM74Q86UV6 250 aa2.95□□□□□ -1.94
CUL3-203ENST00000409096 TRIM73Q86UV7 250 aa2.95□□□□□ -1.94
CUL3-203ENST00000409096 METTL6Q8TCB7 284 aa2.95□□□□□ -1.94
CUL3-203ENST00000409096 ZNF398Q8TD17 642 aa2.95□□□□□ -1.94
CUL3-203ENST00000409096 WIPF2Q8TF74 440 aaPredicted RBP2.95□□□□□ -1.94
CUL3-203ENST00000409096 EME1Q96AY2 570 aa2.95□□□□□ -1.94
CUL3-203ENST00000409096 SH3KBP1Q96B97 665 aa2.95□□□□□ -1.94
CUL3-203ENST00000409096 PIP5K1AQ99755 562 aa2.95□□□□□ -1.94
CUL3-203ENST00000409096 CADM1Q9BY67 442 aaKnown RBP2.95□□□□□ -1.94
CUL3-203ENST00000409096 ADARB2Q9NS39 739 aaKnown RBP2.95□□□□□ -1.94
CUL3-203ENST00000409096 PLEKHB1Q9UF11 243 aaPredicted RBP2.95□□□□□ -1.94
CUL3-203ENST00000409096 SUFUQ9UMX1 484 aa2.95□□□□□ -1.94
CUL3-203ENST00000409096 INSL6Q9Y581 213 aa2.95□□□□□ -1.94
CUL3-203ENST00000409096 A6NCN8 305 aa2.95□□□□□ -1.94
CUL3-203ENST00000409096 CCNT1O60563 726 aaKnown RBP2.95□□□□□ -1.94
CUL3-203ENST00000409096 TACC1O75410 805 aa2.95□□□□□ -1.94
CUL3-203ENST00000409096 UBL4AP11441 157 aa2.95□□□□□ -1.94
CUL3-203ENST00000409096 ARHGAP25P42331 645 aa2.95□□□□□ -1.94
CUL3-203ENST00000409096 GDF5P43026 501 aa2.95□□□□□ -1.94
CUL3-203ENST00000409096 TMPRSS3P57727 454 aa2.95□□□□□ -1.94
CUL3-203ENST00000409096 GOLGA8FQ08AF8 430 aa2.95□□□□□ -1.94
CUL3-203ENST00000409096 PTP4A2Q12974 167 aa2.95□□□□□ -1.94
CUL3-203ENST00000409096 SUMO4Q6EEV6 95 aa2.95□□□□□ -1.94
CUL3-203ENST00000409096 FBXO42Q6P3S6 717 aa2.95□□□□□ -1.94
CUL3-203ENST00000409096 B4GALNT4Q76KP1 1039 aa2.95□□□□□ -1.94
CUL3-203ENST00000409096 NEK8Q86SG6 692 aa2.95□□□□□ -1.94
CUL3-203ENST00000409096 CCDC25Q86WR0 208 aa2.95□□□□□ -1.94
CUL3-203ENST00000409096 GHDCQ8N2G8 530 aa2.95□□□□□ -1.94
CUL3-203ENST00000409096 CMASQ8NFW8 434 aaPredicted RBP2.95□□□□□ -1.94
CUL3-203ENST00000409096 DDB2Q92466 427 aa2.95□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms