RNA–Protein interactions for RNA: ENST00000409088.3

LRRTM4-201, Transcript of leucine rich repeat transmembrane neuronal 4, humanhuman

TSL 1 (best) BASIC

Gene LRRTM4, Length 3,616 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM4-201ENST00000409088 SLC12A8A0AV02 714 aa4.07□□□□□ -1.76
LRRTM4-201ENST00000409088 LPXNO60711 386 aa4.07□□□□□ -1.76
LRRTM4-201ENST00000409088 KRT37O76014 449 aa4.07□□□□□ -1.76
LRRTM4-201ENST00000409088 NEBLO76041 1014 aa4.07□□□□□ -1.76
LRRTM4-201ENST00000409088 DKK1O94907 266 aa4.07□□□□□ -1.76
LRRTM4-201ENST00000409088 RTN3O95197 1032 aaPredicted RBP4.07□□□□□ -1.76
LRRTM4-201ENST00000409088 VNN2O95498 520 aa4.07□□□□□ -1.76
LRRTM4-201ENST00000409088 AP2A1O95782 977 aa4.07□□□□□ -1.76
LRRTM4-201ENST00000409088 TPH1P17752 444 aa4.07□□□□□ -1.76
LRRTM4-201ENST00000409088 ADRA1DP25100 572 aa4.07□□□□□ -1.76
LRRTM4-201ENST00000409088 OR1D2P34982 312 aa4.07□□□□□ -1.76
LRRTM4-201ENST00000409088 NUMBP49757 651 aa4.07□□□□□ -1.76
LRRTM4-201ENST00000409088 COG7P83436 770 aa4.07□□□□□ -1.76
LRRTM4-201ENST00000409088 CBLBQ13191 982 aa4.07□□□□□ -1.76
LRRTM4-201ENST00000409088 IKBKEQ14164 716 aa4.07□□□□□ -1.76
LRRTM4-201ENST00000409088 PIK3R6Q5UE93 754 aa4.07□□□□□ -1.76
LRRTM4-201ENST00000409088 ITPRIPL1Q6GPH6 555 aa4.07□□□□□ -1.76
LRRTM4-201ENST00000409088 C6orf89Q6UWU4 347 aa4.07□□□□□ -1.76
LRRTM4-201ENST00000409088 CCDC121Q6ZUS5 278 aa4.07□□□□□ -1.76
LRRTM4-201ENST00000409088 TFAP2DQ7Z6R9 452 aa4.07□□□□□ -1.76
LRRTM4-201ENST00000409088 TMCO2Q7Z6W1 182 aaPredicted RBP4.07□□□□□ -1.76
LRRTM4-201ENST00000409088 PIGWQ7Z7B1 504 aa4.07□□□□□ -1.76
LRRTM4-201ENST00000409088 ARHGAP12Q8IWW6 846 aa4.07□□□□□ -1.76
LRRTM4-201ENST00000409088 C10orf67Q8IYJ2 551 aa4.07□□□□□ -1.76
LRRTM4-201ENST00000409088 LRRC43Q8N309 656 aa4.07□□□□□ -1.76
LRRTM4-201ENST00000409088 CNTD1Q8N815 330 aa4.07□□□□□ -1.76
LRRTM4-201ENST00000409088 BANPQ8N9N5 519 aa4.07□□□□□ -1.76
LRRTM4-201ENST00000409088 LRRC8CQ8TDW0 803 aa4.07□□□□□ -1.76
LRRTM4-201ENST00000409088 PBXIP1Q96AQ6 731 aa4.07□□□□□ -1.76
LRRTM4-201ENST00000409088 THOC1Q96FV9 657 aaKnown RBP4.07□□□□□ -1.76
LRRTM4-201ENST00000409088 TEKT5Q96M29 485 aa4.07□□□□□ -1.76
LRRTM4-201ENST00000409088 PLCD4Q9BRC7 762 aa4.07□□□□□ -1.76
LRRTM4-201ENST00000409088 TMEM175Q9BSA9 504 aa4.07□□□□□ -1.76
LRRTM4-201ENST00000409088 PITPNM3Q9BZ71 974 aa4.07□□□□□ -1.76
LRRTM4-201ENST00000409088 EIF2B3Q9NR50 452 aaKnown RBP4.07□□□□□ -1.76
LRRTM4-201ENST00000409088 TLR8Q9NR97 1041 aaKnown RBP4.07□□□□□ -1.76
LRRTM4-201ENST00000409088 BFARQ9NZS9 450 aa4.07□□□□□ -1.76
LRRTM4-201ENST00000409088 MARCH2Q9P0N8 246 aa4.07□□□□□ -1.76
LRRTM4-201ENST00000409088 SLC17A7Q9P2U7 560 aa4.07□□□□□ -1.76
LRRTM4-201ENST00000409088 SLC17A6Q9P2U8 582 aa4.07□□□□□ -1.76
LRRTM4-201ENST00000409088 TRHDEQ9UKU6 1024 aa4.07□□□□□ -1.76
LRRTM4-201ENST00000409088 GRID1Q9ULK0 1009 aa4.07□□□□□ -1.76
LRRTM4-201ENST00000409088 TLR6Q9Y2C9 796 aa4.07□□□□□ -1.76
LRRTM4-201ENST00000409088 RPS6KL1Q9Y6S9 549 aa4.07□□□□□ -1.76
LRRTM4-201ENST00000409088 ZNF638Q14966 1978 aaKnown RBP4.06□□□□□ -1.76
LRRTM4-201ENST00000409088 HGSO14964 777 aaPredicted RBP4.06□□□□□ -1.76
LRRTM4-201ENST00000409088 FGF10O15520 208 aaPredicted RBP4.06□□□□□ -1.76
LRRTM4-201ENST00000409088 TBC1D4O60343 1298 aa4.06□□□□□ -1.76
LRRTM4-201ENST00000409088 SNX3O60493 162 aa4.06□□□□□ -1.76
LRRTM4-201ENST00000409088 KRT38O76015 456 aa4.06□□□□□ -1.76
LRRTM4-201ENST00000409088 MT-CYBP00156 380 aaPredicted RBP4.06□□□□□ -1.76
LRRTM4-201ENST00000409088 CXCL10P02778 98 aa4.06□□□□□ -1.76
LRRTM4-201ENST00000409088 GSTA2P09210 222 aa4.06□□□□□ -1.76
LRRTM4-201ENST00000409088 HAPLN1P10915 354 aaPredicted RBP4.06□□□□□ -1.76
LRRTM4-201ENST00000409088 SLC2A3P11169 496 aa4.06□□□□□ -1.76
LRRTM4-201ENST00000409088 NEFHP12036 1026 aa4.06□□□□□ -1.76
LRRTM4-201ENST00000409088 CCNB1P14635 433 aa4.06□□□□□ -1.76
LRRTM4-201ENST00000409088 CCNCP24863 283 aa4.06□□□□□ -1.76
LRRTM4-201ENST00000409088 CORO7P57737 925 aa4.06□□□□□ -1.76
LRRTM4-201ENST00000409088 RPL10AP62906 217 aaKnown RBP4.06□□□□□ -1.76
LRRTM4-201ENST00000409088 PRPSAP1Q14558 356 aa4.06□□□□□ -1.76
LRRTM4-201ENST00000409088 CRYMQ14894 314 aa4.06□□□□□ -1.76
LRRTM4-201ENST00000409088 USP41Q3LFD5 358 aa4.06□□□□□ -1.76
LRRTM4-201ENST00000409088 CERCAMQ5T4B2 595 aa4.06□□□□□ -1.76
LRRTM4-201ENST00000409088 MSANTD2Q6P1R3 559 aa4.06□□□□□ -1.76
LRRTM4-201ENST00000409088 ANKRD33Q7Z3H0 272 aa4.06□□□□□ -1.76
LRRTM4-201ENST00000409088 ZNF354CQ86Y25 554 aa4.06□□□□□ -1.76
LRRTM4-201ENST00000409088 LZTR1Q8N653 840 aa4.06□□□□□ -1.76
LRRTM4-201ENST00000409088 ATP6V0D2Q8N8Y2 350 aa4.06□□□□□ -1.76
LRRTM4-201ENST00000409088 SPATA22Q8NHS9 363 aa4.06□□□□□ -1.76
LRRTM4-201ENST00000409088 DIS3LQ8TF46 1054 aaKnown RBP4.06□□□□□ -1.76
LRRTM4-201ENST00000409088 ALKBH8Q96BT7 664 aaKnown RBP4.06□□□□□ -1.76
LRRTM4-201ENST00000409088 SLC39A13Q96H72 371 aa4.06□□□□□ -1.76
LRRTM4-201ENST00000409088 OXNAD1Q96HP4 312 aaPredicted RBP4.06□□□□□ -1.76
LRRTM4-201ENST00000409088 VAT1Q99536 393 aa4.06□□□□□ -1.76
LRRTM4-201ENST00000409088 GORASP1Q9BQQ3 440 aa4.06□□□□□ -1.76
LRRTM4-201ENST00000409088 MLPHQ9BV36 600 aaPredicted RBP4.06□□□□□ -1.76
LRRTM4-201ENST00000409088 SLC13A1Q9BZW2 595 aa4.06□□□□□ -1.76
LRRTM4-201ENST00000409088 IQCGQ9H095 443 aaKnown RBP4.06□□□□□ -1.76
LRRTM4-201ENST00000409088 GBA3Q9H227 469 aa4.06□□□□□ -1.76
LRRTM4-201ENST00000409088 CCSER2Q9H7U1 834 aa4.06□□□□□ -1.76
LRRTM4-201ENST00000409088 SLCO1B3Q9NPD5 702 aa4.06□□□□□ -1.76
LRRTM4-201ENST00000409088 TMEM39AQ9NV64 488 aa4.06□□□□□ -1.76
LRRTM4-201ENST00000409088 MTPAPQ9NVV4 582 aaKnown RBP eCLIP4.06□□□□□ -1.76
LRRTM4-201ENST00000409088 MOCS1Q9NZB8 636 aa4.06□□□□□ -1.76
LRRTM4-201ENST00000409088 IL37Q9NZH6 218 aa4.06□□□□□ -1.76
LRRTM4-201ENST00000409088 GGT7Q9UJ14 662 aa4.06□□□□□ -1.76
LRRTM4-201ENST00000409088 NEU3Q9UQ49 428 aa4.06□□□□□ -1.76
LRRTM4-201ENST00000409088 FRMPD3Q5JV73 1810 aa4.06□□□□□ -1.76
LRRTM4-201ENST00000409088 CCDC78A2IDD5 438 aa4.06□□□□□ -1.76
LRRTM4-201ENST00000409088 FAM159BA6NKW6 160 aa4.06□□□□□ -1.76
LRRTM4-201ENST00000409088 COPEO14579 308 aa4.06□□□□□ -1.76
LRRTM4-201ENST00000409088 TLR5O60602 858 aa4.06□□□□□ -1.76
LRRTM4-201ENST00000409088 MAFKO60675 156 aa4.06□□□□□ -1.76
LRRTM4-201ENST00000409088 ZNF189O75820 626 aaPredicted RBP4.06□□□□□ -1.76
LRRTM4-201ENST00000409088 CNTN5O94779 1100 aa4.06□□□□□ -1.76
LRRTM4-201ENST00000409088 ZWINTO95229 277 aa4.06□□□□□ -1.76
LRRTM4-201ENST00000409088 POLBP06746 335 aa4.06□□□□□ -1.76
LRRTM4-201ENST00000409088 ERVK-10P10266 1014 aa4.06□□□□□ -1.76
LRRTM4-201ENST00000409088 PGAM1P18669 254 aa4.06□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms