RNA–Protein interactions for RNA: ENST00000406881.3

PCDH11X-207, Transcript of protocadherin 11 X-linked, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDH11X, Length 4,156 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11X-207ENST00000406881 CDC26Q8NHZ8 85 aa4.83□□□□□ -1.64
PCDH11X-207ENST00000406881 SLC44A1Q8WWI5 657 aa4.83□□□□□ -1.64
PCDH11X-207ENST00000406881 ZNF333Q96JL9 665 aa4.83□□□□□ -1.64
PCDH11X-207ENST00000406881 HIPK3Q9H422 1215 aa4.83□□□□□ -1.64
PCDH11X-207ENST00000406881 LRRC4CQ9HCJ2 640 aa4.83□□□□□ -1.64
PCDH11X-207ENST00000406881 NMRK1Q9NWW6 199 aa4.83□□□□□ -1.64
PCDH11X-207ENST00000406881 SPG21Q9NZD8 308 aa4.83□□□□□ -1.64
PCDH11X-207ENST00000406881 CTNNAL1Q9UBT7 734 aa4.83□□□□□ -1.64
PCDH11X-207ENST00000406881 AFF4Q9UHB7 1163 aaKnown RBP4.83□□□□□ -1.64
PCDH11X-207ENST00000406881 HBS1LQ9Y450 684 aaKnown RBP4.83□□□□□ -1.64
PCDH11X-207ENST00000406881 CHD4Q14839 1912 aa4.82□□□□□ -1.64
PCDH11X-207ENST00000406881 TRAV19A0A0A6YYK7 116 aa4.82□□□□□ -1.64
PCDH11X-207ENST00000406881 A0A0U1RQF3 1178 aa4.82□□□□□ -1.64
PCDH11X-207ENST00000406881 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP4.82□□□□□ -1.64
PCDH11X-207ENST00000406881 TCRBV9S1A1TA0A576 114 aa4.82□□□□□ -1.64
PCDH11X-207ENST00000406881 TTLL13PA6NNM8 815 aa4.82□□□□□ -1.64
PCDH11X-207ENST00000406881 TLR5O60602 858 aa4.82□□□□□ -1.64
PCDH11X-207ENST00000406881 VPS4BO75351 444 aa4.82□□□□□ -1.64
PCDH11X-207ENST00000406881 CLDN11O75508 207 aa4.82□□□□□ -1.64
PCDH11X-207ENST00000406881 DNAJC8O75937 253 aaPredicted RBP4.82□□□□□ -1.64
PCDH11X-207ENST00000406881 ADH1AP07327 375 aa4.82□□□□□ -1.64
PCDH11X-207ENST00000406881 DRD4P21917 467 aa4.82□□□□□ -1.64
PCDH11X-207ENST00000406881 GABRB2P47870 512 aa4.82□□□□□ -1.64
PCDH11X-207ENST00000406881 GLUD2P49448 558 aa4.82□□□□□ -1.64
PCDH11X-207ENST00000406881 POLR2LP62875 67 aaKnown RBP4.82□□□□□ -1.64
PCDH11X-207ENST00000406881 BCL2L1Q07817 233 aa4.82□□□□□ -1.64
PCDH11X-207ENST00000406881 LBRQ14739 615 aaKnown RBP4.82□□□□□ -1.64
PCDH11X-207ENST00000406881 WASHC2DQ5SRD0 308 aa4.82□□□□□ -1.64
PCDH11X-207ENST00000406881 C1orf220Q5T0J3 134 aa4.82□□□□□ -1.64
PCDH11X-207ENST00000406881 LRRC8EQ6NSJ5 796 aa4.82□□□□□ -1.64
PCDH11X-207ENST00000406881 CYB5D1Q6P9G0 228 aa4.82□□□□□ -1.64
PCDH11X-207ENST00000406881 TMEM192Q8IY95 271 aa4.82□□□□□ -1.64
PCDH11X-207ENST00000406881 FIBCD1Q8N539 461 aa4.82□□□□□ -1.64
PCDH11X-207ENST00000406881 TEX9Q8N6V9 391 aa4.82□□□□□ -1.64
PCDH11X-207ENST00000406881 TDRD5Q8NAT2 981 aaKnown RBP4.82□□□□□ -1.64
PCDH11X-207ENST00000406881 ICA1LQ8NDH6 482 aa4.82□□□□□ -1.64
PCDH11X-207ENST00000406881 TNIP2Q8NFZ5 429 aa4.82□□□□□ -1.64
PCDH11X-207ENST00000406881 PPP1R13LQ8WUF5 828 aa4.82□□□□□ -1.64
PCDH11X-207ENST00000406881 JADE3Q92613 823 aa4.82□□□□□ -1.64
PCDH11X-207ENST00000406881 INPP5DQ92835 1189 aa4.82□□□□□ -1.64
PCDH11X-207ENST00000406881 NCLNQ969V3 563 aa4.82□□□□□ -1.64
PCDH11X-207ENST00000406881 SH3KBP1Q96B97 665 aa4.82□□□□□ -1.64
PCDH11X-207ENST00000406881 TLCD1Q96CP7 247 aa4.82□□□□□ -1.64
PCDH11X-207ENST00000406881 ZBTB10Q96DT7 871 aa4.82□□□□□ -1.64
PCDH11X-207ENST00000406881 SGF29Q96ES7 293 aa4.82□□□□□ -1.64
PCDH11X-207ENST00000406881 PCED1BQ96HM7 432 aa4.82□□□□□ -1.64
PCDH11X-207ENST00000406881 LGMNQ99538 433 aa4.82□□□□□ -1.64
PCDH11X-207ENST00000406881 MMADHCQ9H3L0 296 aaPredicted RBP4.82□□□□□ -1.64
PCDH11X-207ENST00000406881 ATXN3LQ9H3M9 355 aa4.82□□□□□ -1.64
PCDH11X-207ENST00000406881 TRIM45Q9H8W5 580 aaPredicted RBP4.82□□□□□ -1.64
PCDH11X-207ENST00000406881 BATF3Q9NR55 127 aa4.82□□□□□ -1.64
PCDH11X-207ENST00000406881 ARHGEF4Q9NR80 690 aa4.82□□□□□ -1.64
PCDH11X-207ENST00000406881 RGS18Q9NS28 235 aa4.82□□□□□ -1.64
PCDH11X-207ENST00000406881 WWOXQ9NZC7 414 aa4.82□□□□□ -1.64
PCDH11X-207ENST00000406881 SIX4Q9UIU6 781 aa4.82□□□□□ -1.64
PCDH11X-207ENST00000406881 FBXW11Q9UKB1 542 aa4.82□□□□□ -1.64
PCDH11X-207ENST00000406881 FZD10Q9ULW2 581 aa4.82□□□□□ -1.64
PCDH11X-207ENST00000406881 SOX13Q9UN79 622 aa4.82□□□□□ -1.64
PCDH11X-207ENST00000406881 TNKS1BP1Q9C0C2 1729 aaKnown RBP4.82□□□□□ -1.64
PCDH11X-207ENST00000406881 XIRP1Q702N8 1843 aaKnown RBP4.82□□□□□ -1.64
PCDH11X-207ENST00000406881 ATXN2Q99700 1313 aaKnown RBP4.82□□□□□ -1.64
PCDH11X-207ENST00000406881 FAM95CA0A1B0GW59 222 aa4.82□□□□□ -1.64
PCDH11X-207ENST00000406881 TMEM114B3SHH9 223 aa4.82□□□□□ -1.64
PCDH11X-207ENST00000406881 AIM2O14862 343 aa4.82□□□□□ -1.64
PCDH11X-207ENST00000406881 EDIL3O43854 480 aa4.82□□□□□ -1.64
PCDH11X-207ENST00000406881 CNMDO75829 334 aa4.82□□□□□ -1.64
PCDH11X-207ENST00000406881 FSBPO95073 299 aa4.82□□□□□ -1.64
PCDH11X-207ENST00000406881 ASMTLO95671 621 aa4.82□□□□□ -1.64
PCDH11X-207ENST00000406881 CYP2A6P11509 494 aaPredicted RBP4.82□□□□□ -1.64
PCDH11X-207ENST00000406881 COL6A2P12110 1019 aa4.82□□□□□ -1.64
PCDH11X-207ENST00000406881 CKBP12277 381 aa4.82□□□□□ -1.64
PCDH11X-207ENST00000406881 MAPK1P28482 360 aa4.82□□□□□ -1.64
PCDH11X-207ENST00000406881 SLC5A3P53794 718 aa4.82□□□□□ -1.64
PCDH11X-207ENST00000406881 GBE1Q04446 702 aa4.82□□□□□ -1.64
PCDH11X-207ENST00000406881 FSTL1Q12841 308 aa4.82□□□□□ -1.64
PCDH11X-207ENST00000406881 CSHL1Q14406 222 aa4.82□□□□□ -1.64
PCDH11X-207ENST00000406881 CCL14Q16627 93 aa4.82□□□□□ -1.64
PCDH11X-207ENST00000406881 HABP4Q5JVS0 413 aaKnown RBP4.82□□□□□ -1.64
PCDH11X-207ENST00000406881 THEMIS2Q5TEJ8 643 aa4.82□□□□□ -1.64
PCDH11X-207ENST00000406881 FAM45BPQ6NSW5 357 aa4.82□□□□□ -1.64
PCDH11X-207ENST00000406881 PTAR1Q7Z6K3 402 aaPredicted RBP4.82□□□□□ -1.64
PCDH11X-207ENST00000406881 TMPRSS6Q8IU80 811 aa4.82□□□□□ -1.64
PCDH11X-207ENST00000406881 NKAPQ8N5F7 415 aaKnown RBP4.82□□□□□ -1.64
PCDH11X-207ENST00000406881 FAM45AQ8TCE6 357 aa4.82□□□□□ -1.64
PCDH11X-207ENST00000406881 SPDL1Q96EA4 605 aa4.82□□□□□ -1.64
PCDH11X-207ENST00000406881 NRBF2Q96F24 287 aa4.82□□□□□ -1.64
PCDH11X-207ENST00000406881 SUSD3Q96L08 255 aa4.82□□□□□ -1.64
PCDH11X-207ENST00000406881 HAPLN3Q96S86 360 aa4.82□□□□□ -1.64
PCDH11X-207ENST00000406881 RBBP8Q99708 897 aa4.82□□□□□ -1.64
PCDH11X-207ENST00000406881 NEUROG2Q9H2A3 272 aa4.82□□□□□ -1.64
PCDH11X-207ENST00000406881 SLC24A3Q9HC58 644 aa4.82□□□□□ -1.64
PCDH11X-207ENST00000406881 PNPLA8Q9NP80 782 aa4.82□□□□□ -1.64
PCDH11X-207ENST00000406881 ZDHHC18Q9NUE0 388 aa4.82□□□□□ -1.64
PCDH11X-207ENST00000406881 SLC13A4Q9UKG4 626 aa4.82□□□□□ -1.64
PCDH11X-207ENST00000406881 EIF3LQ9Y262 564 aaKnown RBP4.82□□□□□ -1.64
PCDH11X-207ENST00000406881 A0A1B0GUL6 1792 aa4.82□□□□□ -1.64
PCDH11X-207ENST00000406881 ADGRA2Q96PE1 1338 aa4.82□□□□□ -1.64
PCDH11X-207ENST00000406881 E2F8A0AVK6 867 aa4.82□□□□□ -1.64
PCDH11X-207ENST00000406881 MYBPHLA2RUH7 354 aa4.82□□□□□ -1.64
PCDH11X-207ENST00000406881 FCHO1O14526 889 aa4.82□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms