RNA–Protein interactions for RNA: ENST00000406327.2

HMGB3P18-201, Transcript of high mobility group box 3 pseudogene 18, humanhuman

BASIC

Gene HMGB3P18, Length 590 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P18-201ENST00000406327 UBE2Q2LH0YL09 131 aa5.11□□□□□ -1.59
HMGB3P18-201ENST00000406327 PRYO14603 147 aa5.11□□□□□ -1.59
HMGB3P18-201ENST00000406327 PLSCR1O15162 318 aa5.11□□□□□ -1.59
HMGB3P18-201ENST00000406327 EXOC3O60645 756 aa5.11□□□□□ -1.59
HMGB3P18-201ENST00000406327 KAT7O95251 611 aa5.11□□□□□ -1.59
HMGB3P18-201ENST00000406327 PDE8BO95263 885 aa5.11□□□□□ -1.59
HMGB3P18-201ENST00000406327 ADH4P08319 380 aa5.11□□□□□ -1.59
HMGB3P18-201ENST00000406327 SPARCP09486 303 aa5.11□□□□□ -1.59
HMGB3P18-201ENST00000406327 LYL1P12980 280 aa5.11□□□□□ -1.59
HMGB3P18-201ENST00000406327 ZNF20P17024 532 aa5.11□□□□□ -1.59
HMGB3P18-201ENST00000406327 CDH2P19022 906 aaPredicted RBP5.11□□□□□ -1.59
HMGB3P18-201ENST00000406327 MAKP20794 623 aa5.11□□□□□ -1.59
HMGB3P18-201ENST00000406327 ITPKBP27987 946 aa5.11□□□□□ -1.59
HMGB3P18-201ENST00000406327 AVPR2P30518 371 aa5.11□□□□□ -1.59
HMGB3P18-201ENST00000406327 HOXD13P35453 343 aa5.11□□□□□ -1.59
HMGB3P18-201ENST00000406327 MTNR1AP48039 350 aa5.11□□□□□ -1.59
HMGB3P18-201ENST00000406327 SOX10P56693 466 aa5.11□□□□□ -1.59
HMGB3P18-201ENST00000406327 EFNB1P98172 346 aa5.11□□□□□ -1.59
HMGB3P18-201ENST00000406327 DMWDQ09019 674 aa5.11□□□□□ -1.59
HMGB3P18-201ENST00000406327 DCTN2Q13561 401 aaKnown RBP5.11□□□□□ -1.59
HMGB3P18-201ENST00000406327 IL13RA2Q14627 380 aa5.11□□□□□ -1.59
HMGB3P18-201ENST00000406327 PFKFB3Q16875 520 aaPredicted RBP5.11□□□□□ -1.59
HMGB3P18-201ENST00000406327 CC2D1BQ5T0F9 858 aaKnown RBP5.11□□□□□ -1.59
HMGB3P18-201ENST00000406327 MFSD4BQ5TF39 518 aa5.11□□□□□ -1.59
HMGB3P18-201ENST00000406327 SERPINA13PQ6UXR4 307 aa5.11□□□□□ -1.59
HMGB3P18-201ENST00000406327 TRIM72Q6ZMU5 477 aa5.11□□□□□ -1.59
HMGB3P18-201ENST00000406327 BCDIN3DQ7Z5W3 292 aaKnown RBP5.11□□□□□ -1.59
HMGB3P18-201ENST00000406327 VPS52Q8N1B4 723 aa5.11□□□□□ -1.59
HMGB3P18-201ENST00000406327 POMGNT1Q8WZA1 660 aa5.11□□□□□ -1.59
HMGB3P18-201ENST00000406327 ATP2A3Q93084 1043 aa5.11□□□□□ -1.59
HMGB3P18-201ENST00000406327 FAM149B1Q96BN6 582 aa5.11□□□□□ -1.59
HMGB3P18-201ENST00000406327 KAZALD1Q96I82 304 aa5.11□□□□□ -1.59
HMGB3P18-201ENST00000406327 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP5.11□□□□□ -1.59
HMGB3P18-201ENST00000406327 MLST8Q9BVC4 326 aa5.11□□□□□ -1.59
HMGB3P18-201ENST00000406327 HDHD5Q9BXW7 423 aa5.11□□□□□ -1.59
HMGB3P18-201ENST00000406327 PRKRIP1Q9H875 184 aaPredicted RBP5.11□□□□□ -1.59
HMGB3P18-201ENST00000406327 TLR8Q9NR97 1041 aaKnown RBP5.11□□□□□ -1.59
HMGB3P18-201ENST00000406327 SMYD2Q9NRG4 433 aa5.11□□□□□ -1.59
HMGB3P18-201ENST00000406327 ARL8BQ9NVJ2 186 aa5.11□□□□□ -1.59
HMGB3P18-201ENST00000406327 HCFC1R1Q9NWW0 138 aa5.11□□□□□ -1.59
HMGB3P18-201ENST00000406327 EHD2Q9NZN4 543 aa5.11□□□□□ -1.59
HMGB3P18-201ENST00000406327 TBC1D29Q9UFV1 150 aa5.11□□□□□ -1.59
HMGB3P18-201ENST00000406327 LIMA1Q9UHB6 759 aaKnown RBP5.11□□□□□ -1.59
HMGB3P18-201ENST00000406327 TMEM5Q9Y2B1 443 aa5.11□□□□□ -1.59
HMGB3P18-201ENST00000406327 PSAT1Q9Y617 370 aa5.11□□□□□ -1.59
HMGB3P18-201ENST00000406327 EMSYQ7Z589 1322 aa5.11□□□□□ -1.59
HMGB3P18-201ENST00000406327 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP5.11□□□□□ -1.59
HMGB3P18-201ENST00000406327 FYCO1Q9BQS8 1478 aa5.11□□□□□ -1.59
HMGB3P18-201ENST00000406327 C17orf113A0A1B0GUU1 675 aa5.1□□□□□ -1.59
HMGB3P18-201ENST00000406327 NPIPB15A6NHN6 443 aaPredicted RBP5.1□□□□□ -1.59
HMGB3P18-201ENST00000406327 URODP06132 367 aa5.1□□□□□ -1.59
HMGB3P18-201ENST00000406327 NFKBIAP25963 317 aa5.1□□□□□ -1.59
HMGB3P18-201ENST00000406327 SKIV2L2P42285 1042 aaKnown RBP5.1□□□□□ -1.59
HMGB3P18-201ENST00000406327 ZNF84P51523 738 aa5.1□□□□□ -1.59
HMGB3P18-201ENST00000406327 SHC2P98077 582 aa5.1□□□□□ -1.59
HMGB3P18-201ENST00000406327 HOXA4Q00056 320 aaPredicted RBP5.1□□□□□ -1.59
HMGB3P18-201ENST00000406327 CALD1Q05682 793 aaKnown RBP5.1□□□□□ -1.59
HMGB3P18-201ENST00000406327 CHAF1BQ13112 559 aa5.1□□□□□ -1.59
HMGB3P18-201ENST00000406327 GRIN2BQ13224 1484 aa5.1□□□□□ -1.59
HMGB3P18-201ENST00000406327 TARBP1Q13395 1621 aaKnown RBP5.1□□□□□ -1.59
HMGB3P18-201ENST00000406327 GAB1Q13480 694 aa5.1□□□□□ -1.59
HMGB3P18-201ENST00000406327 ACVR2BQ13705 512 aa5.1□□□□□ -1.59
HMGB3P18-201ENST00000406327 ANXA2RQ3ZCQ2 193 aa5.1□□□□□ -1.59
HMGB3P18-201ENST00000406327 MIIPQ5JXC2 388 aa5.1□□□□□ -1.59
HMGB3P18-201ENST00000406327 MTFR2Q6P444 385 aa5.1□□□□□ -1.59
HMGB3P18-201ENST00000406327 TMEM81Q6P7N7 255 aa5.1□□□□□ -1.59
HMGB3P18-201ENST00000406327 TMEM154Q6P9G4 183 aa5.1□□□□□ -1.59
HMGB3P18-201ENST00000406327 NAPRTQ6XQN6 538 aa5.1□□□□□ -1.59
HMGB3P18-201ENST00000406327 KLBQ86Z14 1044 aa5.1□□□□□ -1.59
HMGB3P18-201ENST00000406327 GHDCQ8N2G8 530 aa5.1□□□□□ -1.59
HMGB3P18-201ENST00000406327 NEK9Q8TD19 979 aa5.1□□□□□ -1.59
HMGB3P18-201ENST00000406327 USP6NLQ92738 828 aa5.1□□□□□ -1.59
HMGB3P18-201ENST00000406327 SMARCE1Q969G3 411 aa5.1□□□□□ -1.59
HMGB3P18-201ENST00000406327 ZNF764Q96H86 408 aaPredicted RBP5.1□□□□□ -1.59
HMGB3P18-201ENST00000406327 MPHOSPH8Q99549 860 aa5.1□□□□□ -1.59
HMGB3P18-201ENST00000406327 ITPAQ9BY32 194 aa5.1□□□□□ -1.59
HMGB3P18-201ENST00000406327 SETD5Q9C0A6 1442 aa5.1□□□□□ -1.59
HMGB3P18-201ENST00000406327 NUAK2Q9H093 628 aa5.1□□□□□ -1.59
HMGB3P18-201ENST00000406327 BRF2Q9HAW0 419 aa5.1□□□□□ -1.59
HMGB3P18-201ENST00000406327 ENTPD7Q9NQZ7 604 aa5.1□□□□□ -1.59
HMGB3P18-201ENST00000406327 SLC2A4RGQ9NR83 387 aa5.1□□□□□ -1.59
HMGB3P18-201ENST00000406327 SYBUQ9NX95 663 aa5.1□□□□□ -1.59
HMGB3P18-201ENST00000406327 BCCIPQ9P287 314 aaKnown RBP eCLIP5.1□□□□□ -1.59
HMGB3P18-201ENST00000406327 FBXO40Q9UH90 709 aa5.1□□□□□ -1.59
HMGB3P18-201ENST00000406327 CDH22Q9UJ99 828 aa5.1□□□□□ -1.59
HMGB3P18-201ENST00000406327 DTX4Q9Y2E6 619 aa5.1□□□□□ -1.59
HMGB3P18-201ENST00000406327 SNAPC4Q5SXM2 1469 aa5.09□□□□□ -1.59
HMGB3P18-201ENST00000406327 IFT140Q96RY7 1462 aa5.09□□□□□ -1.59
HMGB3P18-201ENST00000406327 RAB3GAP2Q9H2M9 1393 aa5.09□□□□□ -1.59
HMGB3P18-201ENST00000406327 KIF1CO43896 1103 aaKnown RBP5.09□□□□□ -1.59
HMGB3P18-201ENST00000406327 STARD3NLO95772 234 aa5.09□□□□□ -1.59
HMGB3P18-201ENST00000406327 ADRB1P08588 477 aa5.09□□□□□ -1.59
HMGB3P18-201ENST00000406327 AKR1A1P14550 325 aa5.09□□□□□ -1.59
HMGB3P18-201ENST00000406327 PSMB10P40306 273 aa5.09□□□□□ -1.59
HMGB3P18-201ENST00000406327 CPA2P48052 419 aa5.09□□□□□ -1.59
HMGB3P18-201ENST00000406327 BLKP51451 505 aa5.09□□□□□ -1.59
HMGB3P18-201ENST00000406327 CYP4F2P78329 520 aa5.09□□□□□ -1.59
HMGB3P18-201ENST00000406327 FOXE3Q13461 319 aa5.09□□□□□ -1.59
HMGB3P18-201ENST00000406327 CRYMQ14894 314 aa5.09□□□□□ -1.59
HMGB3P18-201ENST00000406327 CDSNQ15517 529 aa5.09□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms