RNA–Protein interactions for RNA: ENST00000403495.2

HMGB1P17-201, Transcript of high mobility group box 1 pseudogene 17, humanhuman

BASIC

Gene HMGB1P17, Length 628 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P17-201ENST00000403495 PGM5Q15124 567 aa4.21□□□□□ -1.74
HMGB1P17-201ENST00000403495 CERKLQ49MI3 558 aaPredicted RBP4.21□□□□□ -1.74
HMGB1P17-201ENST00000403495 GLE1Q53GS7 698 aaKnown RBP4.21□□□□□ -1.74
HMGB1P17-201ENST00000403495 ITPRIPL1Q6GPH6 555 aa4.21□□□□□ -1.74
HMGB1P17-201ENST00000403495 GJB7Q6PEY0 223 aa4.21□□□□□ -1.74
HMGB1P17-201ENST00000403495 ZNF782Q6ZMW2 699 aaPredicted RBP4.21□□□□□ -1.74
HMGB1P17-201ENST00000403495 B4GALNT4Q76KP1 1039 aa4.21□□□□□ -1.74
HMGB1P17-201ENST00000403495 CPLX4Q7Z7G2 160 aa4.21□□□□□ -1.74
HMGB1P17-201ENST00000403495 KLBQ86Z14 1044 aa4.21□□□□□ -1.74
HMGB1P17-201ENST00000403495 GHDCQ8N2G8 530 aa4.21□□□□□ -1.74
HMGB1P17-201ENST00000403495 ZNF366Q8N895 744 aa4.21□□□□□ -1.74
HMGB1P17-201ENST00000403495 METTL6Q8TCB7 284 aa4.21□□□□□ -1.74
HMGB1P17-201ENST00000403495 MAP4K1Q92918 833 aa4.21□□□□□ -1.74
HMGB1P17-201ENST00000403495 AGAP2Q99490 1192 aa4.21□□□□□ -1.74
HMGB1P17-201ENST00000403495 SH2D3AQ9BRG2 576 aa4.21□□□□□ -1.74
HMGB1P17-201ENST00000403495 CENPOQ9BU64 300 aa4.21□□□□□ -1.74
HMGB1P17-201ENST00000403495 NPLQ9BXD5 320 aaPredicted RBP4.21□□□□□ -1.74
HMGB1P17-201ENST00000403495 CADM1Q9BY67 442 aaKnown RBP4.21□□□□□ -1.74
HMGB1P17-201ENST00000403495 SEMA4GQ9NTN9 838 aa4.21□□□□□ -1.74
HMGB1P17-201ENST00000403495 BEX4Q9NWD9 120 aaPredicted RBP4.21□□□□□ -1.74
HMGB1P17-201ENST00000403495 SARDHQ9UL12 918 aa4.21□□□□□ -1.74
HMGB1P17-201ENST00000403495 SLC8A2Q9UPR5 921 aa4.21□□□□□ -1.74
HMGB1P17-201ENST00000403495 ICKQ9UPZ9 632 aa4.21□□□□□ -1.74
HMGB1P17-201ENST00000403495 DMRT1Q9Y5R6 373 aa4.21□□□□□ -1.74
HMGB1P17-201ENST00000403495 PIAS3Q9Y6X2 628 aa4.21□□□□□ -1.74
HMGB1P17-201ENST00000403495 ITIH6Q6UXX5 1313 aa4.21□□□□□ -1.74
HMGB1P17-201ENST00000403495 A0A087X0M5 115 aa4.2□□□□□ -1.74
HMGB1P17-201ENST00000403495 TEX13CA0A0J9YWL9 993 aa4.2□□□□□ -1.74
HMGB1P17-201ENST00000403495 A0A1B0GX30 115 aa4.2□□□□□ -1.74
HMGB1P17-201ENST00000403495 TGFB1I1O43294 461 aa4.2□□□□□ -1.74
HMGB1P17-201ENST00000403495 TNFSF14O43557 240 aa4.2□□□□□ -1.74
HMGB1P17-201ENST00000403495 STRNO43815 780 aa4.2□□□□□ -1.74
HMGB1P17-201ENST00000403495 HBP1O60381 514 aa4.2□□□□□ -1.74
HMGB1P17-201ENST00000403495 CCNT1O60563 726 aaKnown RBP4.2□□□□□ -1.74
HMGB1P17-201ENST00000403495 USP12O75317 370 aa4.2□□□□□ -1.74
HMGB1P17-201ENST00000403495 TACC1O75410 805 aa4.2□□□□□ -1.74
HMGB1P17-201ENST00000403495 NFATC1O95644 943 aa4.2□□□□□ -1.74
HMGB1P17-201ENST00000403495 ADAP00813 363 aa4.2□□□□□ -1.74
HMGB1P17-201ENST00000403495 IGLV2-14P01704 120 aa4.2□□□□□ -1.74
HMGB1P17-201ENST00000403495 CHRM5P08912 532 aaPredicted RBP4.2□□□□□ -1.74
HMGB1P17-201ENST00000403495 UBL4AP11441 157 aa4.2□□□□□ -1.74
HMGB1P17-201ENST00000403495 KLRC2P26717 231 aa4.2□□□□□ -1.74
HMGB1P17-201ENST00000403495 TACR3P29371 465 aa4.2□□□□□ -1.74
HMGB1P17-201ENST00000403495 EIF5P55010 431 aaKnown RBP4.2□□□□□ -1.74
HMGB1P17-201ENST00000403495 EFNB1P98172 346 aa4.2□□□□□ -1.74
HMGB1P17-201ENST00000403495 PTP4A2Q12974 167 aa4.2□□□□□ -1.74
HMGB1P17-201ENST00000403495 GALNT3Q14435 633 aa4.2□□□□□ -1.74
HMGB1P17-201ENST00000403495 KIAA1755Q5JYT7 1200 aa4.2□□□□□ -1.74
HMGB1P17-201ENST00000403495 C10orf76Q5T2E6 689 aa4.2□□□□□ -1.74
HMGB1P17-201ENST00000403495 FCRLBQ6BAA4 426 aa4.2□□□□□ -1.74
HMGB1P17-201ENST00000403495 SUMO4Q6EEV6 95 aa4.2□□□□□ -1.74
HMGB1P17-201ENST00000403495 C4orf50Q6ZRC1 276 aa4.2□□□□□ -1.74
HMGB1P17-201ENST00000403495 CCDC25Q86WR0 208 aa4.2□□□□□ -1.74
HMGB1P17-201ENST00000403495 UEVLDQ8IX04 471 aa4.2□□□□□ -1.74
HMGB1P17-201ENST00000403495 DIS3L2Q8IYB7 885 aaKnown RBP4.2□□□□□ -1.74
HMGB1P17-201ENST00000403495 PAQR4Q8N4S7 273 aaPredicted RBP4.2□□□□□ -1.74
HMGB1P17-201ENST00000403495 DNAAF1Q8NEP3 725 aa4.2□□□□□ -1.74
HMGB1P17-201ENST00000403495 NFKBIDQ8NI38 313 aa4.2□□□□□ -1.74
HMGB1P17-201ENST00000403495 OSR1Q8TAX0 266 aaPredicted RBP4.2□□□□□ -1.74
HMGB1P17-201ENST00000403495 ZFPM2Q8WW38 1151 aa4.2□□□□□ -1.74
HMGB1P17-201ENST00000403495 HSPH1Q92598 858 aa4.2□□□□□ -1.74
HMGB1P17-201ENST00000403495 PERPQ96FX8 193 aa4.2□□□□□ -1.74
HMGB1P17-201ENST00000403495 KLHL15Q96M94 604 aa4.2□□□□□ -1.74
HMGB1P17-201ENST00000403495 IKZF4Q9H2S9 585 aa4.2□□□□□ -1.74
HMGB1P17-201ENST00000403495 AAMDCQ9H7C9 122 aa4.2□□□□□ -1.74
HMGB1P17-201ENST00000403495 BRF2Q9HAW0 419 aa4.2□□□□□ -1.74
HMGB1P17-201ENST00000403495 MOV10Q9HCE1 1003 aaKnown RBP4.2□□□□□ -1.74
HMGB1P17-201ENST00000403495 SPATA31A5Q5VU36 1347 aa4.2□□□□□ -1.74
HMGB1P17-201ENST00000403495 SPATA31A6Q5VVP1 1343 aa4.2□□□□□ -1.74
HMGB1P17-201ENST00000403495 SPATA31A7Q8IWB4 1347 aa4.2□□□□□ -1.74
HMGB1P17-201ENST00000403495 FSD2A1L4K1 749 aa4.19□□□□□ -1.74
HMGB1P17-201ENST00000403495 PI4KAP2A4QPH2 592 aa4.19□□□□□ -1.74
HMGB1P17-201ENST00000403495 NPIPB15A6NHN6 443 aaPredicted RBP4.19□□□□□ -1.74
HMGB1P17-201ENST00000403495 C2CD4BA6NLJ0 364 aa4.19□□□□□ -1.74
HMGB1P17-201ENST00000403495 HMGB1P1B2RPK0 211 aaPredicted RBP4.19□□□□□ -1.74
HMGB1P17-201ENST00000403495 TEX22C9J3V5 150 aa4.19□□□□□ -1.74
HMGB1P17-201ENST00000403495 DOK2O60496 412 aa4.19□□□□□ -1.74
HMGB1P17-201ENST00000403495 UGDHO60701 494 aa4.19□□□□□ -1.74
HMGB1P17-201ENST00000403495 RNF8O76064 485 aa4.19□□□□□ -1.74
HMGB1P17-201ENST00000403495 CENPBP07199 599 aaPredicted RBP4.19□□□□□ -1.74
HMGB1P17-201ENST00000403495 RPS6KB1P23443 525 aa4.19□□□□□ -1.74
HMGB1P17-201ENST00000403495 GJC1P36383 396 aa4.19□□□□□ -1.74
HMGB1P17-201ENST00000403495 ACVRL1P37023 503 aa4.19□□□□□ -1.74
HMGB1P17-201ENST00000403495 CASP2P42575 452 aa4.19□□□□□ -1.74
HMGB1P17-201ENST00000403495 GPD2P43304 727 aa4.19□□□□□ -1.74
HMGB1P17-201ENST00000403495 CYP2J2P51589 502 aa4.19□□□□□ -1.74
HMGB1P17-201ENST00000403495 OAZ1P54368 228 aa4.19□□□□□ -1.74
HMGB1P17-201ENST00000403495 TUBA4AP68366 448 aa4.19□□□□□ -1.74
HMGB1P17-201ENST00000403495 ZNF268Q14587 947 aaPredicted RBP4.19□□□□□ -1.74
HMGB1P17-201ENST00000403495 FAM171A1Q5VUB5 890 aa4.19□□□□□ -1.74
HMGB1P17-201ENST00000403495 SNX30Q5VWJ9 437 aa4.19□□□□□ -1.74
HMGB1P17-201ENST00000403495 MZT2BQ6NZ67 158 aa4.19□□□□□ -1.74
HMGB1P17-201ENST00000403495 CFAP161Q6P656 301 aa4.19□□□□□ -1.74
HMGB1P17-201ENST00000403495 C17orf99Q6UX52 265 aa4.19□□□□□ -1.74
HMGB1P17-201ENST00000403495 ZNF66Q6ZN08 573 aa4.19□□□□□ -1.74
HMGB1P17-201ENST00000403495 ADGRF4Q8IZF3 695 aa4.19□□□□□ -1.74
HMGB1P17-201ENST00000403495 BOLLQ8N9W6 283 aaKnown RBP4.19□□□□□ -1.74
HMGB1P17-201ENST00000403495 TNIP2Q8NFZ5 429 aa4.19□□□□□ -1.74
HMGB1P17-201ENST00000403495 ZNF419Q96HQ0 510 aaPredicted RBP4.19□□□□□ -1.74
HMGB1P17-201ENST00000403495 NEUROD6Q96NK8 337 aa4.19□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms