RNA–Protein interactions for RNA: ENST00000401473.7

HMGA1-204, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA1, Length 1,887 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-204ENST00000401473 ACOX2Q99424 681 aa16.31■□□□□ 0.2
HMGA1-204ENST00000401473 MFSD1Q9H3U5 465 aa16.31■□□□□ 0.2
HMGA1-204ENST00000401473 ATP13A1Q9HD20 1204 aa16.31■□□□□ 0.2
HMGA1-204ENST00000401473 HEY1Q9Y5J3 304 aa16.31■□□□□ 0.2
HMGA1-204ENST00000401473 WASH3PC4AMC7 463 aa16.31■□□□□ 0.2
HMGA1-204ENST00000401473 J3KR12 359 aa16.31■□□□□ 0.2
HMGA1-204ENST00000401473 CBX4O00257 560 aa16.31■□□□□ 0.2
HMGA1-204ENST00000401473 PECAM1P16284 738 aaPredicted RBP16.31■□□□□ 0.2
HMGA1-204ENST00000401473 POLR2EP19388 210 aaKnown RBP16.31■□□□□ 0.2
HMGA1-204ENST00000401473 SEC13P55735 322 aa16.31■□□□□ 0.2
HMGA1-204ENST00000401473 ARF5P84085 180 aa16.31■□□□□ 0.2
HMGA1-204ENST00000401473 KLF1Q13351 362 aaPredicted RBP16.31■□□□□ 0.2
HMGA1-204ENST00000401473 DMC1Q14565 340 aa16.31■□□□□ 0.2
HMGA1-204ENST00000401473 C2orf27AQ580R0 203 aa16.31■□□□□ 0.2
HMGA1-204ENST00000401473 LINGO4Q6UY18 593 aa16.31■□□□□ 0.2
HMGA1-204ENST00000401473 SYT10Q6XYQ8 523 aa16.31■□□□□ 0.2
HMGA1-204ENST00000401473 BBS12Q6ZW61 710 aa16.31■□□□□ 0.2
HMGA1-204ENST00000401473 ZSCAN30Q86W11 494 aa16.31■□□□□ 0.2
HMGA1-204ENST00000401473 PJA1Q8NG27 643 aa16.31■□□□□ 0.2
HMGA1-204ENST00000401473 TRAF3IP1Q8TDR0 691 aaPredicted RBP16.31■□□□□ 0.2
HMGA1-204ENST00000401473 WFIKKN2Q8TEU8 576 aa16.31■□□□□ 0.2
HMGA1-204ENST00000401473 COG1Q8WTW3 980 aa16.31■□□□□ 0.2
HMGA1-204ENST00000401473 NELL2Q99435 816 aa16.31■□□□□ 0.2
HMGA1-204ENST00000401473 LMAN1LQ9HAT1 526 aa16.31■□□□□ 0.2
HMGA1-204ENST00000401473 VPS51Q9UID3 782 aa16.31■□□□□ 0.2
HMGA1-204ENST00000401473 SLCO3A1Q9UIG8 710 aa16.31■□□□□ 0.2
HMGA1-204ENST00000401473 SNX12Q9UMY4 172 aa16.31■□□□□ 0.2
HMGA1-204ENST00000401473 DFFAO00273 331 aa16.3■□□□□ 0.2
HMGA1-204ENST00000401473 TIMM44O43615 452 aa16.3■□□□□ 0.2
HMGA1-204ENST00000401473 DLDP09622 509 aaKnown RBP16.3■□□□□ 0.2
HMGA1-204ENST00000401473 TIE1P35590 1138 aa16.3■□□□□ 0.2
HMGA1-204ENST00000401473 STK19P49842 368 aaPredicted RBP16.3■□□□□ 0.2
HMGA1-204ENST00000401473 ECT2LQ008S8 904 aa16.3■□□□□ 0.2
HMGA1-204ENST00000401473 TFDP2Q14188 446 aa16.3■□□□□ 0.2
HMGA1-204ENST00000401473 GAS6Q14393 721 aa16.3■□□□□ 0.2
HMGA1-204ENST00000401473 PAPD7Q5XG87 772 aaKnown RBP16.3■□□□□ 0.2
HMGA1-204ENST00000401473 EGFLAMQ63HQ2 1017 aa16.3■□□□□ 0.2
HMGA1-204ENST00000401473 LEKR1Q6ZMV7 388 aa16.3■□□□□ 0.2
HMGA1-204ENST00000401473 CCDC105Q8IYK2 499 aa16.3■□□□□ 0.2
HMGA1-204ENST00000401473 DCAF4L2Q8NA75 395 aa16.3■□□□□ 0.2
HMGA1-204ENST00000401473 EXOC4Q96A65 974 aa16.3■□□□□ 0.2
HMGA1-204ENST00000401473 HAUS1Q96CS2 278 aa16.3■□□□□ 0.2
HMGA1-204ENST00000401473 MS4A14Q96JA4 679 aa16.3■□□□□ 0.2
HMGA1-204ENST00000401473 MRGPRX3Q96LB0 322 aa16.3■□□□□ 0.2
HMGA1-204ENST00000401473 OSBPL9Q96SU4 736 aa16.3■□□□□ 0.2
HMGA1-204ENST00000401473 MRPS17Q9Y2R5 130 aaKnown RBP16.3■□□□□ 0.2
HMGA1-204ENST00000401473 SIT1Q9Y3P8 196 aa16.3■□□□□ 0.2
HMGA1-204ENST00000401473 WDR87Q6ZQQ6 2873 aa16.3■□□□□ 0.2
HMGA1-204ENST00000401473 ZNF185O15231 689 aa16.29■□□□□ 0.2
HMGA1-204ENST00000401473 KDELR3O43731 214 aa16.29■□□□□ 0.2
HMGA1-204ENST00000401473 MAFKO60675 156 aa16.29■□□□□ 0.2
HMGA1-204ENST00000401473 RNF40O75150 1001 aa16.29■□□□□ 0.2
HMGA1-204ENST00000401473 DCNP07585 359 aaKnown RBP16.29■□□□□ 0.2
HMGA1-204ENST00000401473 ZFXP17010 805 aaPredicted RBP16.29■□□□□ 0.2
HMGA1-204ENST00000401473 SERPINB6P35237 376 aa16.29■□□□□ 0.2
HMGA1-204ENST00000401473 EIF4HQ15056 248 aaKnown RBP16.29■□□□□ 0.2
HMGA1-204ENST00000401473 FAM182AQ5T1J6 154 aa16.29■□□□□ 0.2
HMGA1-204ENST00000401473 PKN3Q6P5Z2 889 aa16.29■□□□□ 0.2
HMGA1-204ENST00000401473 Q6ZS52 159 aa16.29■□□□□ 0.2
HMGA1-204ENST00000401473 NUDT18Q6ZVK8 323 aa16.29■□□□□ 0.2
HMGA1-204ENST00000401473 B4GALNT4Q76KP1 1039 aa16.29■□□□□ 0.2
HMGA1-204ENST00000401473 BMP8AQ7Z5Y6 402 aa16.29■□□□□ 0.2
HMGA1-204ENST00000401473 ACDQ96AP0 544 aa16.29■□□□□ 0.2
HMGA1-204ENST00000401473 C2orf49Q9BVC5 232 aaPredicted RBP16.29■□□□□ 0.2
HMGA1-204ENST00000401473 PRDM16Q9HAZ2 1276 aa16.29■□□□□ 0.2
HMGA1-204ENST00000401473 K7ERQ8 282 aa16.29■□□□□ 0.2
HMGA1-204ENST00000401473 CEP104O60308 925 aa16.29■□□□□ 0.2
HMGA1-204ENST00000401473 TJP3O95049 919 aa16.29■□□□□ 0.2
HMGA1-204ENST00000401473 ATP5BP06576 529 aaKnown RBP16.29■□□□□ 0.2
HMGA1-204ENST00000401473 CETN2P41208 172 aa16.29■□□□□ 0.2
HMGA1-204ENST00000401473 GALNT2Q10471 571 aa16.29■□□□□ 0.2
HMGA1-204ENST00000401473 ZNF234Q14588 700 aa16.29■□□□□ 0.2
HMGA1-204ENST00000401473 ADAT2Q7Z6V5 191 aaKnown RBP16.29■□□□□ 0.2
HMGA1-204ENST00000401473 ZNF354CQ86Y25 554 aa16.29■□□□□ 0.2
HMGA1-204ENST00000401473 SLC13A5Q86YT5 568 aaPredicted RBP16.29■□□□□ 0.2
HMGA1-204ENST00000401473 ZNF513Q8N8E2 541 aaPredicted RBP16.29■□□□□ 0.2
HMGA1-204ENST00000401473 IL17RCQ8NAC3 791 aa16.29■□□□□ 0.2
HMGA1-204ENST00000401473 USP33Q8TEY7 942 aa16.29■□□□□ 0.2
HMGA1-204ENST00000401473 OLFM3Q96PB7 478 aa16.29■□□□□ 0.2
HMGA1-204ENST00000401473 LGMNQ99538 433 aa16.29■□□□□ 0.2
HMGA1-204ENST00000401473 NAPGQ99747 312 aaPredicted RBP16.29■□□□□ 0.2
HMGA1-204ENST00000401473 FAM118BQ9BPY3 351 aa16.29■□□□□ 0.2
HMGA1-204ENST00000401473 POLR3BQ9NW08 1133 aaPredicted RBP16.29■□□□□ 0.2
HMGA1-204ENST00000401473 DLGAP2Q9P1A6 1054 aa16.29■□□□□ 0.2
HMGA1-204ENST00000401473 THAP10Q9P2Z0 257 aaPredicted RBP16.29■□□□□ 0.2
HMGA1-204ENST00000401473 IPO11Q9UI26 975 aaKnown RBP16.29■□□□□ 0.2
HMGA1-204ENST00000401473 PLA2G4CQ9UP65 541 aa16.29■□□□□ 0.2
HMGA1-204ENST00000401473 ERVW-1Q9UQF0 538 aa16.29■□□□□ 0.2
HMGA1-204ENST00000401473 CTAGE9A4FU28 777 aa16.28■□□□□ 0.2
HMGA1-204ENST00000401473 ARHGAP42A6NI28 874 aa16.28■□□□□ 0.2
HMGA1-204ENST00000401473 APOC4-APOC2K7ER74 178 aa16.28■□□□□ 0.2
HMGA1-204ENST00000401473 SMAD6O43541 496 aaKnown RBP16.28■□□□□ 0.2
HMGA1-204ENST00000401473 GPR37L1O60883 481 aa16.28■□□□□ 0.2
HMGA1-204ENST00000401473 APOC2P02655 101 aa16.28■□□□□ 0.2
HMGA1-204ENST00000401473 HNRNPLP14866 589 aaKnown RBP eCLIP16.28■□□□□ 0.2
HMGA1-204ENST00000401473 AOC1P19801 751 aa16.28■□□□□ 0.2
HMGA1-204ENST00000401473 ETFBP38117 255 aa16.28■□□□□ 0.2
HMGA1-204ENST00000401473 GARSP41250 739 aaKnown RBP16.28■□□□□ 0.2
HMGA1-204ENST00000401473 FBXO43Q4G163 708 aa16.28■□□□□ 0.2
HMGA1-204ENST00000401473 SEL1L2Q5TEA6 688 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms