RNA–Protein interactions for RNA: ENST00000400540.5

LINC00544-201, long intergenic non-protein coding RNA 544, humanhuman

TSL 5 BASIC

Gene LINC00544, Length 1,031 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00544-201ENST00000400540 FFAR2O15552 330 aa12.25□□□□□ -0.45
LINC00544-201ENST00000400540 RRP8O43159 456 aaKnown RBP12.25□□□□□ -0.45
LINC00544-201ENST00000400540 SLC7A4O43246 635 aa12.25□□□□□ -0.45
LINC00544-201ENST00000400540 ATP9BO43861 1147 aa12.25□□□□□ -0.45
LINC00544-201ENST00000400540 RNGTTO60942 597 aaKnown RBP12.25□□□□□ -0.45
LINC00544-201ENST00000400540 MYF5P13349 255 aa12.25□□□□□ -0.45
LINC00544-201ENST00000400540 STX17P56962 302 aa12.25□□□□□ -0.45
LINC00544-201ENST00000400540 APBA1Q02410 837 aa12.25□□□□□ -0.45
LINC00544-201ENST00000400540 SULT2A1Q06520 285 aa12.25□□□□□ -0.45
LINC00544-201ENST00000400540 CCDC173Q0VFZ6 552 aa12.25□□□□□ -0.45
LINC00544-201ENST00000400540 ILKQ13418 452 aa12.25□□□□□ -0.45
LINC00544-201ENST00000400540 AUHQ13825 339 aaKnown RBP12.25□□□□□ -0.45
LINC00544-201ENST00000400540 STAT4Q14765 748 aa12.25□□□□□ -0.45
LINC00544-201ENST00000400540 DLG2Q15700 870 aa12.25□□□□□ -0.45
LINC00544-201ENST00000400540 SETMARQ53H47 684 aaPredicted RBP12.25□□□□□ -0.45
LINC00544-201ENST00000400540 PIP5KL1Q5T9C9 394 aa12.25□□□□□ -0.45
LINC00544-201ENST00000400540 TTC39BQ5VTQ0 682 aaPredicted RBP12.25□□□□□ -0.45
LINC00544-201ENST00000400540 KDM7AQ6ZMT4 941 aa12.25□□□□□ -0.45
LINC00544-201ENST00000400540 C14orf80Q86SX3 495 aa12.25□□□□□ -0.45
LINC00544-201ENST00000400540 IQCHQ86VS3 1027 aa12.25□□□□□ -0.45
LINC00544-201ENST00000400540 ERICH1Q86X53 443 aa12.25□□□□□ -0.45
LINC00544-201ENST00000400540 PASD1Q8IV76 773 aa12.25□□□□□ -0.45
LINC00544-201ENST00000400540 TRIM59Q8IWR1 403 aa12.25□□□□□ -0.45
LINC00544-201ENST00000400540 WDTC1Q8N5D0 677 aa12.25□□□□□ -0.45
LINC00544-201ENST00000400540 SH2D3CQ8N5H7 860 aa12.25□□□□□ -0.45
LINC00544-201ENST00000400540 DCBLD1Q8N8Z6 715 aa12.25□□□□□ -0.45
LINC00544-201ENST00000400540 ARRDC3Q96B67 414 aa12.25□□□□□ -0.45
LINC00544-201ENST00000400540 SLC2A13Q96QE2 648 aa12.25□□□□□ -0.45
LINC00544-201ENST00000400540 MED15Q96RN5 788 aa12.25□□□□□ -0.45
LINC00544-201ENST00000400540 CPXM1Q96SM3 734 aa12.25□□□□□ -0.45
LINC00544-201ENST00000400540 FEM1AQ9BSK4 669 aa12.25□□□□□ -0.45
LINC00544-201ENST00000400540 GTPBP4Q9BZE4 634 aaKnown RBP12.25□□□□□ -0.45
LINC00544-201ENST00000400540 THAP9Q9H5L6 903 aa12.25□□□□□ -0.45
LINC00544-201ENST00000400540 UBE2TQ9NPD8 197 aaPredicted RBP12.25□□□□□ -0.45
LINC00544-201ENST00000400540 TPX2Q9ULW0 747 aaKnown RBP12.25□□□□□ -0.45
LINC00544-201ENST00000400540 DMTF1Q9Y222 760 aa12.25□□□□□ -0.45
LINC00544-201ENST00000400540 OR51B4Q9Y5P0 310 aa12.25□□□□□ -0.45
LINC00544-201ENST00000400540 HS3ST4Q9Y661 456 aa12.25□□□□□ -0.45
LINC00544-201ENST00000400540 CHD5Q8TDI0 1954 aa12.25□□□□□ -0.45
LINC00544-201ENST00000400540 KIF26BQ2KJY2 2108 aa12.25□□□□□ -0.45
LINC00544-201ENST00000400540 BECN2A8MW95 431 aa12.24□□□□□ -0.45
LINC00544-201ENST00000400540 C1QTNF3-AMACRE9PGA6 284 aa12.24□□□□□ -0.45
LINC00544-201ENST00000400540 PRAMEF26H0Y7S4 382 aa12.24□□□□□ -0.45
LINC00544-201ENST00000400540 MCF2LO15068 1137 aa12.24□□□□□ -0.45
LINC00544-201ENST00000400540 SLC31A1O15431 190 aa12.24□□□□□ -0.45
LINC00544-201ENST00000400540 MED7O43513 233 aa12.24□□□□□ -0.45
LINC00544-201ENST00000400540 CNTN5O94779 1100 aa12.24□□□□□ -0.45
LINC00544-201ENST00000400540 MT-CO1P00395 513 aa12.24□□□□□ -0.45
LINC00544-201ENST00000400540 AFPP02771 609 aaKnown RBP12.24□□□□□ -0.45
LINC00544-201ENST00000400540 THEGLP0DJG4 465 aa12.24□□□□□ -0.45
LINC00544-201ENST00000400540 GIMD1P0DJR0 217 aa12.24□□□□□ -0.45
LINC00544-201ENST00000400540 SRCP12931 536 aa12.24□□□□□ -0.45
LINC00544-201ENST00000400540 ZNF18P17022 549 aa12.24□□□□□ -0.45
LINC00544-201ENST00000400540 DGKAP23743 735 aa12.24□□□□□ -0.45
LINC00544-201ENST00000400540 CCR1P32246 355 aa12.24□□□□□ -0.45
LINC00544-201ENST00000400540 C19orf57Q0VDD7 668 aa12.24□□□□□ -0.45
LINC00544-201ENST00000400540 MEA1Q16626 185 aa12.24□□□□□ -0.45
LINC00544-201ENST00000400540 LRRK1Q38SD2 2015 aa12.24□□□□□ -0.45
LINC00544-201ENST00000400540 OTUD1Q5VV17 481 aaPredicted RBP12.24□□□□□ -0.45
LINC00544-201ENST00000400540 FAM46CQ5VWP2 391 aa12.24□□□□□ -0.45
LINC00544-201ENST00000400540 PCSK4Q6UW60 755 aa12.24□□□□□ -0.45
LINC00544-201ENST00000400540 FAM183BPQ6ZVS7 135 aa12.24□□□□□ -0.45
LINC00544-201ENST00000400540 TMC6Q7Z403 805 aa12.24□□□□□ -0.45
LINC00544-201ENST00000400540 DSG4Q86SJ6 1040 aa12.24□□□□□ -0.45
LINC00544-201ENST00000400540 TMEM145Q8NBT3 493 aa12.24□□□□□ -0.45
LINC00544-201ENST00000400540 BAP1Q92560 729 aa12.24□□□□□ -0.45
LINC00544-201ENST00000400540 FGF11Q92914 225 aa12.24□□□□□ -0.45
LINC00544-201ENST00000400540 RNF34Q969K3 372 aa12.24□□□□□ -0.45
LINC00544-201ENST00000400540 KLHDC7BQ96G42 594 aa12.24□□□□□ -0.45
LINC00544-201ENST00000400540 NOX5Q96PH1 765 aa12.24□□□□□ -0.45
LINC00544-201ENST00000400540 PSMB7Q99436 277 aa12.24□□□□□ -0.45
LINC00544-201ENST00000400540 PREBQ9HCU5 417 aa12.24□□□□□ -0.45
LINC00544-201ENST00000400540 ANLNQ9NQW6 1124 aa12.24□□□□□ -0.45
LINC00544-201ENST00000400540 SLC12A6Q9UHW9 1150 aa12.24□□□□□ -0.45
LINC00544-201ENST00000400540 VPS28Q9UK41 221 aa12.24□□□□□ -0.45
LINC00544-201ENST00000400540 SNX10Q9Y5X0 201 aa12.24□□□□□ -0.45
LINC00544-201ENST00000400540 ZNF462Q96JM2 2506 aa12.24□□□□□ -0.45
LINC00544-201ENST00000400540 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP12.23□□□□□ -0.45
LINC00544-201ENST00000400540 A0A1W2PQU0 124 aa12.23□□□□□ -0.45
LINC00544-201ENST00000400540 GOLGA6L4A6NEF3 574 aa12.23□□□□□ -0.45
LINC00544-201ENST00000400540 I6L893 689 aaPredicted RBP12.23□□□□□ -0.45
LINC00544-201ENST00000400540 K7ERQ8 282 aa12.23□□□□□ -0.45
LINC00544-201ENST00000400540 BIN1O00499 593 aa12.23□□□□□ -0.45
LINC00544-201ENST00000400540 ALOX15BO15296 676 aa12.23□□□□□ -0.45
LINC00544-201ENST00000400540 SNAP91O60641 907 aa12.23□□□□□ -0.45
LINC00544-201ENST00000400540 MAGEC1O60732 1142 aa12.23□□□□□ -0.45
LINC00544-201ENST00000400540 MT-CO3P00414 261 aa12.23□□□□□ -0.45
LINC00544-201ENST00000400540 VASPP50552 380 aaPredicted RBP12.23□□□□□ -0.45
LINC00544-201ENST00000400540 CLDN2P57739 230 aa12.23□□□□□ -0.45
LINC00544-201ENST00000400540 CXADRP78310 365 aa12.23□□□□□ -0.45
LINC00544-201ENST00000400540 DAB2P98082 770 aa12.23□□□□□ -0.45
LINC00544-201ENST00000400540 CDK17Q00537 523 aa12.23□□□□□ -0.45
LINC00544-201ENST00000400540 TLE3Q04726 772 aa12.23□□□□□ -0.45
LINC00544-201ENST00000400540 KCNMA1Q12791 1236 aa12.23□□□□□ -0.45
LINC00544-201ENST00000400540 OVGP1Q12889 678 aa12.23□□□□□ -0.45
LINC00544-201ENST00000400540 NME3Q13232 169 aa12.23□□□□□ -0.45
LINC00544-201ENST00000400540 ZNF177Q13360 481 aaPredicted RBP12.23□□□□□ -0.45
LINC00544-201ENST00000400540 ZNF211Q13398 564 aaPredicted RBP12.23□□□□□ -0.45
LINC00544-201ENST00000400540 ARHGAP44Q17R89 818 aa12.23□□□□□ -0.45
LINC00544-201ENST00000400540 TBC1D25Q3MII6 688 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms