RNA–Protein interactions for RNA: ENST00000399975.7

USP16-203, Transcript of ubiquitin specific peptidase 16, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene USP16, Length 2,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP16-203ENST00000399975 ATP8A1Q9Y2Q0 1164 aa7□□□□□ -1.29
USP16-203ENST00000399975 HEY1Q9Y5J3 304 aa7□□□□□ -1.29
USP16-203ENST00000399975 CHD7Q9P2D1 2997 aa7□□□□□ -1.29
USP16-203ENST00000399975 CEP290O15078 2479 aa7□□□□□ -1.29
USP16-203ENST00000399975 H7C0C1 242 aa7□□□□□ -1.29
USP16-203ENST00000399975 TSPAN3O60637 253 aa7□□□□□ -1.29
USP16-203ENST00000399975 OPHN1O60890 802 aa7□□□□□ -1.29
USP16-203ENST00000399975 ADH5P11766 374 aa7□□□□□ -1.29
USP16-203ENST00000399975 MCM3P25205 808 aa7□□□□□ -1.29
USP16-203ENST00000399975 IVDP26440 423 aa7□□□□□ -1.29
USP16-203ENST00000399975 ATP5OP48047 213 aa7□□□□□ -1.29
USP16-203ENST00000399975 HNRNPH2P55795 449 aaKnown RBP7□□□□□ -1.29
USP16-203ENST00000399975 GEMIN4P57678 1058 aaKnown RBP7□□□□□ -1.29
USP16-203ENST00000399975 WASHC5Q12768 1159 aa7□□□□□ -1.29
USP16-203ENST00000399975 NR1H3Q13133 447 aa7□□□□□ -1.29
USP16-203ENST00000399975 HNRNPDQ14103 355 aaKnown RBP7□□□□□ -1.29
USP16-203ENST00000399975 PREPLQ4J6C6 727 aaPredicted RBP7□□□□□ -1.29
USP16-203ENST00000399975 RALGPS1Q5JS13 557 aa7□□□□□ -1.29
USP16-203ENST00000399975 PARM1Q6UWI2 310 aa7□□□□□ -1.29
USP16-203ENST00000399975 CCDC105Q8IYK2 499 aa7□□□□□ -1.29
USP16-203ENST00000399975 PHTF2Q8N3S3 785 aa7□□□□□ -1.29
USP16-203ENST00000399975 CCDC89Q8N998 374 aa7□□□□□ -1.29
USP16-203ENST00000399975 KDM1BQ8NB78 822 aa7□□□□□ -1.29
USP16-203ENST00000399975 BBOF1Q8ND07 529 aa7□□□□□ -1.29
USP16-203ENST00000399975 DDI1Q8WTU0 396 aa7□□□□□ -1.29
USP16-203ENST00000399975 ACDQ96AP0 544 aa7□□□□□ -1.29
USP16-203ENST00000399975 TADA1Q96BN2 335 aa7□□□□□ -1.29
USP16-203ENST00000399975 SPATA13Q96N96 652 aa7□□□□□ -1.29
USP16-203ENST00000399975 ERP44Q9BS26 406 aa7□□□□□ -1.29
USP16-203ENST00000399975 FEM1AQ9BSK4 669 aa7□□□□□ -1.29
USP16-203ENST00000399975 ECT2Q9H8V3 914 aa7□□□□□ -1.29
USP16-203ENST00000399975 ARFGAP3Q9NP61 516 aa7□□□□□ -1.29
USP16-203ENST00000399975 PAK5Q9P286 719 aa7□□□□□ -1.29
USP16-203ENST00000399975 ZNF148Q9UQR1 794 aa7□□□□□ -1.29
USP16-203ENST00000399975 WNT6Q9Y6F9 365 aa7□□□□□ -1.29
USP16-203ENST00000399975 PALM2-AKAP2B1ALY0 433 aaPredicted RBP6.99□□□□□ -1.29
USP16-203ENST00000399975 H0Y626 953 aa6.99□□□□□ -1.29
USP16-203ENST00000399975 TIMM44O43615 452 aa6.99□□□□□ -1.29
USP16-203ENST00000399975 STK10O94804 968 aaKnown RBP6.99□□□□□ -1.29
USP16-203ENST00000399975 KRT14P02533 472 aa6.99□□□□□ -1.29
USP16-203ENST00000399975 TYRP14679 529 aa6.99□□□□□ -1.29
USP16-203ENST00000399975 GLULP15104 373 aa6.99□□□□□ -1.29
USP16-203ENST00000399975 CES1P23141 567 aa6.99□□□□□ -1.29
USP16-203ENST00000399975 PTPN3P26045 913 aa6.99□□□□□ -1.29
USP16-203ENST00000399975 RBL1P28749 1068 aa6.99□□□□□ -1.29
USP16-203ENST00000399975 FDFT1P37268 417 aa6.99□□□□□ -1.29
USP16-203ENST00000399975 HSPA9P38646 679 aaKnown RBP6.99□□□□□ -1.29
USP16-203ENST00000399975 CSNK1DP48730 415 aa6.99□□□□□ -1.29
USP16-203ENST00000399975 CAV1Q03135 178 aa6.99□□□□□ -1.29
USP16-203ENST00000399975 SULT2A1Q06520 285 aa6.99□□□□□ -1.29
USP16-203ENST00000399975 SNX1Q13596 522 aa6.99□□□□□ -1.29
USP16-203ENST00000399975 INO80DQ53TQ3 878 aaPredicted RBP6.99□□□□□ -1.29
USP16-203ENST00000399975 LY6G5CQ5SRR4 150 aa6.99□□□□□ -1.29
USP16-203ENST00000399975 ARMC3Q5W041 872 aa6.99□□□□□ -1.29
USP16-203ENST00000399975 HEATR6Q6AI08 1181 aaKnown RBP6.99□□□□□ -1.29
USP16-203ENST00000399975 TICRRQ7Z2Z1 1910 aa6.99□□□□□ -1.29
USP16-203ENST00000399975 PCGF5Q86SE9 256 aa6.99□□□□□ -1.29
USP16-203ENST00000399975 CIR1Q86X95 450 aaPredicted RBP6.99□□□□□ -1.29
USP16-203ENST00000399975 MFN1Q8IWA4 741 aa6.99□□□□□ -1.29
USP16-203ENST00000399975 CCDC117Q8IWD4 279 aaPredicted RBP6.99□□□□□ -1.29
USP16-203ENST00000399975 PLPP6Q8IY26 295 aa6.99□□□□□ -1.29
USP16-203ENST00000399975 YAF2Q8IY57 180 aa6.99□□□□□ -1.29
USP16-203ENST00000399975 OR52K2Q8NGK3 314 aa6.99□□□□□ -1.29
USP16-203ENST00000399975 RSAD2Q8WXG1 361 aa6.99□□□□□ -1.29
USP16-203ENST00000399975 XPO6Q96QU8 1125 aaKnown RBP6.99□□□□□ -1.29
USP16-203ENST00000399975 TMEM121Q9BTD3 319 aa6.99□□□□□ -1.29
USP16-203ENST00000399975 TRMT61BQ9BVS5 477 aaKnown RBP6.99□□□□□ -1.29
USP16-203ENST00000399975 PHACTR1Q9C0D0 580 aa6.99□□□□□ -1.29
USP16-203ENST00000399975 ANKZF1Q9H8Y5 726 aa6.99□□□□□ -1.29
USP16-203ENST00000399975 EIF2B3Q9NR50 452 aaKnown RBP6.99□□□□□ -1.29
USP16-203ENST00000399975 FAM114A2Q9NRY5 505 aa6.99□□□□□ -1.29
USP16-203ENST00000399975 HAUS2Q9NVX0 235 aa6.99□□□□□ -1.29
USP16-203ENST00000399975 IPO11Q9UI26 975 aaKnown RBP6.99□□□□□ -1.29
USP16-203ENST00000399975 PRRC2BQ5JSZ5 2229 aaKnown RBP6.99□□□□□ -1.29
USP16-203ENST00000399975 MIA3Q5JRA6 1907 aa6.99□□□□□ -1.29
USP16-203ENST00000399975 C2CD4DB7Z1M9 353 aa6.99□□□□□ -1.29
USP16-203ENST00000399975 TRDMT1O14717 391 aaKnown RBP6.99□□□□□ -1.29
USP16-203ENST00000399975 TTI1O43156 1089 aa6.99□□□□□ -1.29
USP16-203ENST00000399975 PSMD3O43242 534 aa6.99□□□□□ -1.29
USP16-203ENST00000399975 ASLP04424 464 aa6.99□□□□□ -1.29
USP16-203ENST00000399975 ITIH2P19823 946 aa6.99□□□□□ -1.29
USP16-203ENST00000399975 KCNA5P22460 613 aa6.99□□□□□ -1.29
USP16-203ENST00000399975 KCNJ1P48048 391 aa6.99□□□□□ -1.29
USP16-203ENST00000399975 RENBPP51606 427 aa6.99□□□□□ -1.29
USP16-203ENST00000399975 LMAN2Q12907 356 aa6.99□□□□□ -1.29
USP16-203ENST00000399975 CUL1Q13616 776 aa6.99□□□□□ -1.29
USP16-203ENST00000399975 RUNX3Q13761 415 aa6.99□□□□□ -1.29
USP16-203ENST00000399975 E2F5Q15329 346 aa6.99□□□□□ -1.29
USP16-203ENST00000399975 LLGL1Q15334 1064 aa6.99□□□□□ -1.29
USP16-203ENST00000399975 TEX44Q53QW1 395 aa6.99□□□□□ -1.29
USP16-203ENST00000399975 RNF219Q5W0B1 726 aaPredicted RBP6.99□□□□□ -1.29
USP16-203ENST00000399975 TFAP2DQ7Z6R9 452 aa6.99□□□□□ -1.29
USP16-203ENST00000399975 ZC3H18Q86VM9 953 aaKnown RBP6.99□□□□□ -1.29
USP16-203ENST00000399975 HOOK3Q86VS8 718 aa6.99□□□□□ -1.29
USP16-203ENST00000399975 TP53INP2Q8IXH6 220 aa6.99□□□□□ -1.29
USP16-203ENST00000399975 CARNMT1Q8N4J0 409 aa6.99□□□□□ -1.29
USP16-203ENST00000399975 WFDC5Q8TCV5 224 aa6.99□□□□□ -1.29
USP16-203ENST00000399975 SPOCK2Q92563 424 aa6.99□□□□□ -1.29
USP16-203ENST00000399975 FGF14Q92915 247 aa6.99□□□□□ -1.29
USP16-203ENST00000399975 ISG20Q96AZ6 181 aaKnown RBP6.99□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 109.2 ms