RNA–Protein interactions for RNA: ENST00000399916.5

RUNX3-203, Transcript of runt related transcription factor 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene RUNX3, Length 4,340 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNX3-203ENST00000399916 HGH1Q9BTY7 390 aa13.98□□□□□ -0.17
RUNX3-203ENST00000399916 DNAJB4Q9UDY4 337 aa13.98□□□□□ -0.17
RUNX3-203ENST00000399916 GOLGA4Q13439 2230 aaKnown RBP13.98□□□□□ -0.17
RUNX3-203ENST00000399916 MEIS2O14770 477 aa13.97□□□□□ -0.17
RUNX3-203ENST00000399916 MRASO14807 208 aa13.97□□□□□ -0.17
RUNX3-203ENST00000399916 ICMTO60725 284 aa13.97□□□□□ -0.17
RUNX3-203ENST00000399916 PRELPP51888 382 aa13.97□□□□□ -0.17
RUNX3-203ENST00000399916 ARHGDIAP52565 204 aa13.97□□□□□ -0.17
RUNX3-203ENST00000399916 PSMC5P62195 406 aa13.97□□□□□ -0.17
RUNX3-203ENST00000399916 DMP1Q13316 513 aaPredicted RBP13.97□□□□□ -0.17
RUNX3-203ENST00000399916 HYIQ5T013 277 aa13.97□□□□□ -0.17
RUNX3-203ENST00000399916 Q6ZNX1 250 aa13.97□□□□□ -0.17
RUNX3-203ENST00000399916 ZDHHC14Q8IZN3 488 aa13.97□□□□□ -0.17
RUNX3-203ENST00000399916 DTX3Q8N9I9 347 aa13.97□□□□□ -0.17
RUNX3-203ENST00000399916 FAM149B1Q96BN6 582 aa13.97□□□□□ -0.17
RUNX3-203ENST00000399916 CCDC17Q96LX7 622 aa13.97□□□□□ -0.17
RUNX3-203ENST00000399916 ACSS3Q9H6R3 686 aa13.97□□□□□ -0.17
RUNX3-203ENST00000399916 FRMPD4Q14CM0 1322 aa13.97□□□□□ -0.17
RUNX3-203ENST00000399916 FSCN2O14926 492 aa13.97□□□□□ -0.17
RUNX3-203ENST00000399916 GH2P01242 217 aa13.97□□□□□ -0.17
RUNX3-203ENST00000399916 NPR1P16066 1061 aa13.97□□□□□ -0.17
RUNX3-203ENST00000399916 KRR1Q13601 381 aaKnown RBP13.97□□□□□ -0.17
RUNX3-203ENST00000399916 TFDP2Q14188 446 aa13.97□□□□□ -0.17
RUNX3-203ENST00000399916 SEMA3AQ14563 771 aa13.97□□□□□ -0.17
RUNX3-203ENST00000399916 GRIN3AQ8TCU5 1115 aa13.97□□□□□ -0.17
RUNX3-203ENST00000399916 SNX19Q92543 992 aa13.97□□□□□ -0.17
RUNX3-203ENST00000399916 LPGAT1Q92604 370 aa13.97□□□□□ -0.17
RUNX3-203ENST00000399916 TOPORSQ9NS56 1045 aaPredicted RBP13.97□□□□□ -0.17
RUNX3-203ENST00000399916 PAQR5Q9NXK6 330 aaPredicted RBP13.97□□□□□ -0.17
RUNX3-203ENST00000399916 A0A0B4J269 797 aa13.97□□□□□ -0.17
RUNX3-203ENST00000399916 RGSL1A5PLK6 1076 aa13.97□□□□□ -0.17
RUNX3-203ENST00000399916 SH3BP5O60239 455 aa13.97□□□□□ -0.17
RUNX3-203ENST00000399916 SLITRK3O94933 977 aa13.97□□□□□ -0.17
RUNX3-203ENST00000399916 LDLRP01130 860 aa13.97□□□□□ -0.17
RUNX3-203ENST00000399916 SERPINB9P50453 376 aa13.97□□□□□ -0.17
RUNX3-203ENST00000399916 CLCQ05315 142 aa13.97□□□□□ -0.17
RUNX3-203ENST00000399916 CBWD2Q8IUF1 395 aa13.97□□□□□ -0.17
RUNX3-203ENST00000399916 CPNE9Q8IYJ1 553 aa13.97□□□□□ -0.17
RUNX3-203ENST00000399916 FAM9CQ8IZT9 166 aa13.97□□□□□ -0.17
RUNX3-203ENST00000399916 PHTF2Q8N3S3 785 aa13.97□□□□□ -0.17
RUNX3-203ENST00000399916 S100ZQ8WXG8 99 aa13.97□□□□□ -0.17
RUNX3-203ENST00000399916 MAGED4Q96JG8 741 aa13.97□□□□□ -0.17
RUNX3-203ENST00000399916 KMT5AQ9NQR1 393 aa13.97□□□□□ -0.17
RUNX3-203ENST00000399916 VPS4AQ9UN37 437 aa13.97□□□□□ -0.17
RUNX3-203ENST00000399916 EVPLLA8MZ36 301 aa13.96□□□□□ -0.17
RUNX3-203ENST00000399916 MYBPC1Q00872 1141 aa13.96□□□□□ -0.17
RUNX3-203ENST00000399916 CYP20A1Q6UW02 462 aa13.96□□□□□ -0.17
RUNX3-203ENST00000399916 C10orf107Q8IVU9 208 aa13.96□□□□□ -0.17
RUNX3-203ENST00000399916 METTL25Q8N6Q8 603 aa13.96□□□□□ -0.17
RUNX3-203ENST00000399916 C9orf16Q9BUW7 83 aa13.96□□□□□ -0.17
RUNX3-203ENST00000399916 ATP6AP2A0A1C7CYW4 349 aa13.96□□□□□ -0.17
RUNX3-203ENST00000399916 MEN1O00255 615 aa13.96□□□□□ -0.17
RUNX3-203ENST00000399916 EIF3DO15371 548 aaKnown RBP eCLIP13.96□□□□□ -0.17
RUNX3-203ENST00000399916 ATP6AP2O75787 350 aa13.96□□□□□ -0.17
RUNX3-203ENST00000399916 TOP3BO95985 862 aaKnown RBP13.96□□□□□ -0.17
RUNX3-203ENST00000399916 CALB1P05937 261 aa13.96□□□□□ -0.17
RUNX3-203ENST00000399916 CHRNA5P30532 468 aa13.96□□□□□ -0.17
RUNX3-203ENST00000399916 NAGLUP54802 743 aa13.96□□□□□ -0.17
RUNX3-203ENST00000399916 CD83Q01151 205 aa13.96□□□□□ -0.17
RUNX3-203ENST00000399916 CCNIQ14094 377 aa13.96□□□□□ -0.17
RUNX3-203ENST00000399916 CA9Q16790 459 aa13.96□□□□□ -0.17
RUNX3-203ENST00000399916 CCDC142Q17RM4 750 aa13.96□□□□□ -0.17
RUNX3-203ENST00000399916 HEATR6Q6AI08 1181 aaKnown RBP13.96□□□□□ -0.17
RUNX3-203ENST00000399916 HAUS6Q7Z4H7 955 aa13.96□□□□□ -0.17
RUNX3-203ENST00000399916 EPS8L1Q8TE68 723 aa13.96□□□□□ -0.17
RUNX3-203ENST00000399916 TRPC4APQ8TEL6 797 aa13.96□□□□□ -0.17
RUNX3-203ENST00000399916 RNF34Q969K3 372 aa13.96□□□□□ -0.17
RUNX3-203ENST00000399916 NARS2Q96I59 477 aaKnown RBP13.96□□□□□ -0.17
RUNX3-203ENST00000399916 B3GALT6Q96L58 329 aa13.96□□□□□ -0.17
RUNX3-203ENST00000399916 ZNF560Q96MR9 790 aa13.96□□□□□ -0.17
RUNX3-203ENST00000399916 COG4Q9H9E3 785 aa13.96□□□□□ -0.17
RUNX3-203ENST00000399916 DBNDD1Q9H9R9 158 aa13.96□□□□□ -0.17
RUNX3-203ENST00000399916 GPRC5CQ9NQ84 441 aa13.96□□□□□ -0.17
RUNX3-203ENST00000399916 ATPIF1Q9UII2 106 aa13.96□□□□□ -0.17
RUNX3-203ENST00000399916 RAD54BQ9Y620 910 aa13.96□□□□□ -0.17
RUNX3-203ENST00000399916 PPEF1O14829 653 aaPredicted RBP13.96□□□□□ -0.17
RUNX3-203ENST00000399916 ALOX15BO15296 676 aa13.96□□□□□ -0.17
RUNX3-203ENST00000399916 PROSCO94903 275 aa13.96□□□□□ -0.17
RUNX3-203ENST00000399916 NDUFB10O96000 172 aa13.96□□□□□ -0.17
RUNX3-203ENST00000399916 ABHD2P08910 425 aa13.96□□□□□ -0.17
RUNX3-203ENST00000399916 DLDP09622 509 aaKnown RBP13.96□□□□□ -0.17
RUNX3-203ENST00000399916 ADSSP30520 456 aa13.96□□□□□ -0.17
RUNX3-203ENST00000399916 COLEC12Q5KU26 742 aa13.96□□□□□ -0.17
RUNX3-203ENST00000399916 SPOCD1Q6ZMY3 1216 aa13.96□□□□□ -0.17
RUNX3-203ENST00000399916 MMAAQ8IVH4 418 aaKnown RBP13.96□□□□□ -0.17
RUNX3-203ENST00000399916 FEZF2Q8TBJ5 459 aa13.96□□□□□ -0.17
RUNX3-203ENST00000399916 CDK5RAP1Q96SZ6 601 aaKnown RBP13.96□□□□□ -0.17
RUNX3-203ENST00000399916 TXLNGYQ9BZA5 131 aa13.96□□□□□ -0.17
RUNX3-203ENST00000399916 TSR3Q9UJK0 312 aaKnown RBP13.96□□□□□ -0.17
RUNX3-203ENST00000399916 A0A088AWK7 358 aa13.96□□□□□ -0.18
RUNX3-203ENST00000399916 TMEM150BA6NC51 233 aa13.96□□□□□ -0.18
RUNX3-203ENST00000399916 BBOX1O75936 387 aa13.96□□□□□ -0.18
RUNX3-203ENST00000399916 PIGNO95427 931 aa13.96□□□□□ -0.18
RUNX3-203ENST00000399916 ZNF37AP17032 561 aaPredicted RBP13.96□□□□□ -0.18
RUNX3-203ENST00000399916 MUTP22033 750 aa13.96□□□□□ -0.18
RUNX3-203ENST00000399916 SHMT1P34896 483 aa13.96□□□□□ -0.18
RUNX3-203ENST00000399916 HMBOX1Q6NT76 420 aa13.96□□□□□ -0.18
RUNX3-203ENST00000399916 KCNT2Q6UVM3 1135 aa13.96□□□□□ -0.18
RUNX3-203ENST00000399916 PIWIL3Q7Z3Z3 882 aaKnown RBP13.96□□□□□ -0.18
RUNX3-203ENST00000399916 ALDH16A1Q8IZ83 802 aa13.96□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms