RNA–Protein interactions for RNA: ENST00000399903.6

PTPRA-205, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 5 BASIC

Gene PTPRA, Length 3,337 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-205ENST00000399903 SETD3Q86TU7 594 aaPredicted RBP17.4■□□□□ 0.38
PTPRA-205ENST00000399903 CHST13Q8NET6 341 aa17.4■□□□□ 0.38
PTPRA-205ENST00000399903 CPXM1Q96SM3 734 aa17.4■□□□□ 0.38
PTPRA-205ENST00000399903 CDH19Q9H159 772 aa17.4■□□□□ 0.38
PTPRA-205ENST00000399903 INO80B-WBP1J3KQ70 363 aa17.39■□□□□ 0.38
PTPRA-205ENST00000399903 KDM1AO60341 852 aa17.39■□□□□ 0.38
PTPRA-205ENST00000399903 VAPBO95292 243 aa17.39■□□□□ 0.38
PTPRA-205ENST00000399903 C1QAP02745 245 aa17.39■□□□□ 0.38
PTPRA-205ENST00000399903 NR4A1P22736 598 aa17.39■□□□□ 0.38
PTPRA-205ENST00000399903 ACAT1P24752 427 aaKnown RBP17.39■□□□□ 0.38
PTPRA-205ENST00000399903 GRK2P25098 689 aa17.39■□□□□ 0.38
PTPRA-205ENST00000399903 PPARGP37231 505 aaPredicted RBP17.39■□□□□ 0.38
PTPRA-205ENST00000399903 YAP1P46937 504 aaKnown RBP17.39■□□□□ 0.38
PTPRA-205ENST00000399903 SNRPFP62306 86 aaKnown RBP17.39■□□□□ 0.38
PTPRA-205ENST00000399903 ITGA7Q13683 1181 aa17.39■□□□□ 0.38
PTPRA-205ENST00000399903 IKBKEQ14164 716 aa17.39■□□□□ 0.38
PTPRA-205ENST00000399903 NOMO1Q15155 1222 aa17.39■□□□□ 0.38
PTPRA-205ENST00000399903 LSM12Q3MHD2 195 aaKnown RBP17.39■□□□□ 0.38
PTPRA-205ENST00000399903 C9orf131Q5VYM1 1079 aa17.39■□□□□ 0.38
PTPRA-205ENST00000399903 IL31Q6EBC2 164 aa17.39■□□□□ 0.38
PTPRA-205ENST00000399903 DCDC5Q6ZRR9 648 aa17.39■□□□□ 0.38
PTPRA-205ENST00000399903 PLD6Q8N2A8 252 aaKnown RBP17.39■□□□□ 0.38
PTPRA-205ENST00000399903 UBA3Q8TBC4 463 aa17.39■□□□□ 0.38
PTPRA-205ENST00000399903 SCYL1Q96KG9 808 aa17.39■□□□□ 0.38
PTPRA-205ENST00000399903 INO80BQ9C086 356 aaPredicted RBP17.39■□□□□ 0.38
PTPRA-205ENST00000399903 CXorf21Q9HAI6 301 aa17.39■□□□□ 0.38
PTPRA-205ENST00000399903 CLK4Q9HAZ1 481 aaKnown RBP17.39■□□□□ 0.38
PTPRA-205ENST00000399903 H3BNH8 94 aa17.39■□□□□ 0.37
PTPRA-205ENST00000399903 MT-CO1P00395 513 aa17.39■□□□□ 0.37
PTPRA-205ENST00000399903 EEF1B2P24534 225 aaKnown RBP17.39■□□□□ 0.37
PTPRA-205ENST00000399903 PITRM1Q5JRX3 1037 aa17.39■□□□□ 0.37
PTPRA-205ENST00000399903 LRRC8EQ6NSJ5 796 aa17.39■□□□□ 0.37
PTPRA-205ENST00000399903 BORAQ6PGQ7 559 aa17.39■□□□□ 0.37
PTPRA-205ENST00000399903 OFCC1Q8IZS5 231 aa17.39■□□□□ 0.37
PTPRA-205ENST00000399903 SPATA33Q96N06 139 aa17.39■□□□□ 0.37
PTPRA-205ENST00000399903 PEBP4Q96S96 227 aa17.39■□□□□ 0.37
PTPRA-205ENST00000399903 APBA2Q99767 749 aa17.39■□□□□ 0.37
PTPRA-205ENST00000399903 RBPJLQ9UBG7 517 aa17.39■□□□□ 0.37
PTPRA-205ENST00000399903 GINS2Q9Y248 185 aa17.39■□□□□ 0.37
PTPRA-205ENST00000399903 NOL3O60936 208 aaKnown RBP17.39■□□□□ 0.37
PTPRA-205ENST00000399903 OR6B2Q6IFH4 312 aa17.39■□□□□ 0.37
PTPRA-205ENST00000399903 CHERPQ8IWX8 916 aaKnown RBP17.39■□□□□ 0.37
PTPRA-205ENST00000399903 TMEM192Q8IY95 271 aa17.39■□□□□ 0.37
PTPRA-205ENST00000399903 CCNYL1Q8N7R7 359 aa17.39■□□□□ 0.37
PTPRA-205ENST00000399903 BORCS5Q969J3 196 aa17.39■□□□□ 0.37
PTPRA-205ENST00000399903 POLR1BQ9H9Y6 1135 aa17.39■□□□□ 0.37
PTPRA-205ENST00000399903 PNPLA3Q9NST1 481 aa17.39■□□□□ 0.37
PTPRA-205ENST00000399903 SACM1LQ9NTJ5 587 aa17.39■□□□□ 0.37
PTPRA-205ENST00000399903 SFMBT1Q9UHJ3 866 aa17.39■□□□□ 0.37
PTPRA-205ENST00000399903 HES2Q9Y543 173 aa17.39■□□□□ 0.37
PTPRA-205ENST00000399903 MCM3APO60318 1980 aa17.38■□□□□ 0.37
PTPRA-205ENST00000399903 RNF103-CHMP3A0A140T963 221 aa17.38■□□□□ 0.37
PTPRA-205ENST00000399903 ZNF839A8K0R7 811 aa17.38■□□□□ 0.37
PTPRA-205ENST00000399903 IQCJ-SCHIP1C9J366 451 aaPredicted RBP17.38■□□□□ 0.37
PTPRA-205ENST00000399903 ZNF182P17025 639 aaPredicted RBP17.38■□□□□ 0.37
PTPRA-205ENST00000399903 HDCP19113 662 aa17.38■□□□□ 0.37
PTPRA-205ENST00000399903 MAP4P27816 1152 aaKnown RBP17.38■□□□□ 0.37
PTPRA-205ENST00000399903 TRIM16LQ309B1 348 aa17.38■□□□□ 0.37
PTPRA-205ENST00000399903 NANOGP8Q6NSW7 305 aa17.38■□□□□ 0.37
PTPRA-205ENST00000399903 C15orf39Q6ZRI6 1047 aa17.38■□□□□ 0.37
PTPRA-205ENST00000399903 RIOX2Q8IUF8 465 aa17.38■□□□□ 0.37
PTPRA-205ENST00000399903 RANBP9Q96S59 729 aa17.38■□□□□ 0.37
PTPRA-205ENST00000399903 ADARB2Q9NS39 739 aaKnown RBP17.38■□□□□ 0.37
PTPRA-205ENST00000399903 OLAHQ9NV23 265 aa17.38■□□□□ 0.37
PTPRA-205ENST00000399903 CYTH4Q9UIA0 394 aa17.38■□□□□ 0.37
PTPRA-205ENST00000399903 NDUFB5O43674 189 aa17.38■□□□□ 0.37
PTPRA-205ENST00000399903 ITGBL1O95965 494 aaPredicted RBP17.38■□□□□ 0.37
PTPRA-205ENST00000399903 LTFP02788 710 aa17.38■□□□□ 0.37
PTPRA-205ENST00000399903 PDGFRAP16234 1089 aa17.38■□□□□ 0.37
PTPRA-205ENST00000399903 YBX3P16989 372 aaKnown RBP eCLIP17.38■□□□□ 0.373e-7■■□□□ 13.1
PTPRA-205ENST00000399903 ZNF26P17031 533 aaPredicted RBP17.38■□□□□ 0.37
PTPRA-205ENST00000399903 GARTP22102 1010 aa17.38■□□□□ 0.37
PTPRA-205ENST00000399903 CA8P35219 290 aa17.38■□□□□ 0.37
PTPRA-205ENST00000399903 CTBSQ01459 385 aa17.38■□□□□ 0.37
PTPRA-205ENST00000399903 TFDP2Q14188 446 aa17.38■□□□□ 0.37
PTPRA-205ENST00000399903 PIGGQ5H8A4 983 aa17.38■□□□□ 0.37
PTPRA-205ENST00000399903 GK5Q6ZS86 529 aa17.38■□□□□ 0.37
PTPRA-205ENST00000399903 CCDC80Q76M96 950 aa17.38■□□□□ 0.37
PTPRA-205ENST00000399903 ARMCX6Q7L4S7 300 aa17.38■□□□□ 0.37
PTPRA-205ENST00000399903 HERC6Q8IVU3 1022 aa17.38■□□□□ 0.37
PTPRA-205ENST00000399903 FIBCD1Q8N539 461 aa17.38■□□□□ 0.37
PTPRA-205ENST00000399903 CDCA5Q96FF9 252 aa17.38■□□□□ 0.37
PTPRA-205ENST00000399903 MPHOSPH6Q99547 160 aaKnown RBP17.38■□□□□ 0.37
PTPRA-205ENST00000399903 IGSF9Q9P2J2 1179 aa17.38■□□□□ 0.37
PTPRA-205ENST00000399903 DCDC2Q9UHG0 476 aa17.38■□□□□ 0.37
PTPRA-205ENST00000399903 GOLGA8TH3BQL2 631 aa17.37■□□□□ 0.37
PTPRA-205ENST00000399903 CNMDO75829 334 aa17.37■□□□□ 0.37
PTPRA-205ENST00000399903 OXSR1O95747 527 aaPredicted RBP17.37■□□□□ 0.37
PTPRA-205ENST00000399903 TRUB2O95900 331 aaKnown RBP17.37■□□□□ 0.37
PTPRA-205ENST00000399903 MGAT1P26572 445 aa17.37■□□□□ 0.37
PTPRA-205ENST00000399903 PTPN7P35236 360 aa17.37■□□□□ 0.37
PTPRA-205ENST00000399903 ARL2P36404 184 aa17.37■□□□□ 0.37
PTPRA-205ENST00000399903 IRF9Q00978 393 aa17.37■□□□□ 0.37
PTPRA-205ENST00000399903 PFKPQ01813 784 aa17.37■□□□□ 0.37
PTPRA-205ENST00000399903 AARS2Q5JTZ9 985 aaKnown RBP17.37■□□□□ 0.37
PTPRA-205ENST00000399903 ZNF362Q5T0B9 420 aaPredicted RBP17.37■□□□□ 0.37
PTPRA-205ENST00000399903 SEPT1Q8WYJ6 367 aa17.37■□□□□ 0.37
PTPRA-205ENST00000399903 SIGLEC10Q96LC7 697 aa17.37■□□□□ 0.37
PTPRA-205ENST00000399903 FAM96AQ9H5X1 160 aa17.37■□□□□ 0.37
PTPRA-205ENST00000399903 STN1Q9H668 368 aaKnown RBP17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms