RNA–Protein interactions for RNA: ENST00000399079.7

HLA-DQB1-202, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,501 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-202ENST00000399079 DNTTP04053 509 aa14.43□□□□□ -0.1
HLA-DQB1-202ENST00000399079 CYP1A2P05177 515 aa14.43□□□□□ -0.1
HLA-DQB1-202ENST00000399079 SRCP12931 536 aa14.43□□□□□ -0.1
HLA-DQB1-202ENST00000399079 ITPKAP23677 461 aa14.43□□□□□ -0.1
HLA-DQB1-202ENST00000399079 ACVRL1P37023 503 aa14.43□□□□□ -0.1
HLA-DQB1-202ENST00000399079 AIF1P55008 147 aa14.43□□□□□ -0.1
HLA-DQB1-202ENST00000399079 KRT83P78385 493 aa14.43□□□□□ -0.1
HLA-DQB1-202ENST00000399079 ZNF33AQ06730 810 aa14.43□□□□□ -0.1
HLA-DQB1-202ENST00000399079 CSRP2Q16527 193 aa14.43□□□□□ -0.1
HLA-DQB1-202ENST00000399079 SLC18A3Q16572 532 aa14.43□□□□□ -0.1
HLA-DQB1-202ENST00000399079 TSR1Q2NL82 804 aaKnown RBP14.43□□□□□ -0.1
HLA-DQB1-202ENST00000399079 ZNF776Q68DI1 518 aaPredicted RBP14.43□□□□□ -0.1
HLA-DQB1-202ENST00000399079 SLC36A4Q6YBV0 504 aa14.43□□□□□ -0.1
HLA-DQB1-202ENST00000399079 PRR23CQ6ZRP0 262 aa14.43□□□□□ -0.1
HLA-DQB1-202ENST00000399079 Q6ZVU0 165 aa14.43□□□□□ -0.1
HLA-DQB1-202ENST00000399079 CYP2U1Q7Z449 544 aa14.43□□□□□ -0.1
HLA-DQB1-202ENST00000399079 DCAF4L2Q8NA75 395 aa14.43□□□□□ -0.1
HLA-DQB1-202ENST00000399079 ATP11CQ8NB49 1132 aa14.43□□□□□ -0.1
HLA-DQB1-202ENST00000399079 PIGKQ92643 395 aa14.43□□□□□ -0.1
HLA-DQB1-202ENST00000399079 SNRNP25Q9BV90 132 aaKnown RBP14.43□□□□□ -0.1
HLA-DQB1-202ENST00000399079 NUP85Q9BW27 656 aa14.43□□□□□ -0.1
HLA-DQB1-202ENST00000399079 GPR174Q9BXC1 333 aa14.43□□□□□ -0.1
HLA-DQB1-202ENST00000399079 DEF6Q9H4E7 631 aa14.43□□□□□ -0.1
HLA-DQB1-202ENST00000399079 FBRSQ9HAH7 460 aa14.43□□□□□ -0.1
HLA-DQB1-202ENST00000399079 ATP13A1Q9HD20 1204 aa14.43□□□□□ -0.1
HLA-DQB1-202ENST00000399079 RXFP3Q9NSD7 469 aa14.43□□□□□ -0.1
HLA-DQB1-202ENST00000399079 AP4E1Q9UPM8 1137 aa14.43□□□□□ -0.1
HLA-DQB1-202ENST00000399079 HS3ST2Q9Y278 367 aa14.43□□□□□ -0.1
HLA-DQB1-202ENST00000399079 ACTL7AQ9Y615 435 aa14.43□□□□□ -0.1
HLA-DQB1-202ENST00000399079 RALGAPA1Q6GYQ0 2036 aa14.43□□□□□ -0.1
HLA-DQB1-202ENST00000399079 SPTBN4Q9H254 2564 aa14.42□□□□□ -0.1
HLA-DQB1-202ENST00000399079 SSU72P8A0A1W2PR75 194 aa14.42□□□□□ -0.1
HLA-DQB1-202ENST00000399079 AKR1B15C9JRZ8 316 aaPredicted RBP14.42□□□□□ -0.1
HLA-DQB1-202ENST00000399079 BNIP3LO60238 219 aa14.42□□□□□ -0.1
HLA-DQB1-202ENST00000399079 PRPSAP2O60256 369 aa14.42□□□□□ -0.1
HLA-DQB1-202ENST00000399079 GDF9O60383 454 aa14.42□□□□□ -0.1
HLA-DQB1-202ENST00000399079 ZMPSTE24O75844 475 aa14.42□□□□□ -0.1
HLA-DQB1-202ENST00000399079 IGLV3-19P01714 112 aa14.42□□□□□ -0.1
HLA-DQB1-202ENST00000399079 ZNF806P0C7X5 589 aa14.42□□□□□ -0.1
HLA-DQB1-202ENST00000399079 C7P10643 843 aa14.42□□□□□ -0.1
HLA-DQB1-202ENST00000399079 ACSL1P33121 698 aa14.42□□□□□ -0.1
HLA-DQB1-202ENST00000399079 MAPKAPK2P49137 400 aa14.42□□□□□ -0.1
HLA-DQB1-202ENST00000399079 CST6Q15828 149 aa14.42□□□□□ -0.1
HLA-DQB1-202ENST00000399079 SPDYCQ5MJ68 293 aa14.42□□□□□ -0.1
HLA-DQB1-202ENST00000399079 ERMARDQ5T6L9 678 aa14.42□□□□□ -0.1
HLA-DQB1-202ENST00000399079 LYSMD4Q5XG99 296 aa14.42□□□□□ -0.1
HLA-DQB1-202ENST00000399079 IL31Q6EBC2 164 aa14.42□□□□□ -0.1
HLA-DQB1-202ENST00000399079 GPR161Q8N6U8 529 aaKnown RBP14.42□□□□□ -0.1
HLA-DQB1-202ENST00000399079 HSPA12BQ96MM6 686 aa14.42□□□□□ -0.1
HLA-DQB1-202ENST00000399079 EPAS1Q99814 870 aa14.42□□□□□ -0.1
HLA-DQB1-202ENST00000399079 DHX35Q9H5Z1 703 aaKnown RBP14.42□□□□□ -0.1
HLA-DQB1-202ENST00000399079 NHEJ1Q9H9Q4 299 aaPredicted RBP14.42□□□□□ -0.1
HLA-DQB1-202ENST00000399079 SPTLC3Q9NUV7 552 aa14.42□□□□□ -0.1
HLA-DQB1-202ENST00000399079 SERGEFQ9UGK8 458 aa14.42□□□□□ -0.1
HLA-DQB1-202ENST00000399079 ANAPC7Q9UJX3 599 aa14.42□□□□□ -0.1
HLA-DQB1-202ENST00000399079 CEP250Q9BV73 2442 aa14.42□□□□□ -0.1
HLA-DQB1-202ENST00000399079 NUMA1Q14980 2115 aa14.42□□□□□ -0.1
HLA-DQB1-202ENST00000399079 MID1O15344 667 aa14.41□□□□□ -0.1
HLA-DQB1-202ENST00000399079 AKR1B10O60218 316 aa14.41□□□□□ -0.1
HLA-DQB1-202ENST00000399079 RNASEH1O60930 286 aaKnown RBP14.41□□□□□ -0.1
HLA-DQB1-202ENST00000399079 IL1R2P27930 398 aa14.41□□□□□ -0.1
HLA-DQB1-202ENST00000399079 PSMD8P48556 350 aa14.41□□□□□ -0.1
HLA-DQB1-202ENST00000399079 VASPP50552 380 aaPredicted RBP14.41□□□□□ -0.1
HLA-DQB1-202ENST00000399079 ZNF75DP51815 510 aa14.41□□□□□ -0.1
HLA-DQB1-202ENST00000399079 METAP1P53582 386 aa14.41□□□□□ -0.1
HLA-DQB1-202ENST00000399079 ARF5P84085 180 aa14.41□□□□□ -0.1
HLA-DQB1-202ENST00000399079 ZBTB16Q05516 673 aa14.41□□□□□ -0.1
HLA-DQB1-202ENST00000399079 KCNT1Q5JUK3 1230 aa14.41□□□□□ -0.1
HLA-DQB1-202ENST00000399079 ZNF783Q6ZMS7 281 aa14.41□□□□□ -0.1
HLA-DQB1-202ENST00000399079 CNGA4Q8IV77 575 aa14.41□□□□□ -0.1
HLA-DQB1-202ENST00000399079 TC2NQ8N9U0 490 aa14.41□□□□□ -0.1
HLA-DQB1-202ENST00000399079 ARHGEF2Q92974 986 aaKnown RBP14.41□□□□□ -0.1
HLA-DQB1-202ENST00000399079 ZNF419Q96HQ0 510 aaPredicted RBP14.41□□□□□ -0.1
HLA-DQB1-202ENST00000399079 ACE2Q9BYF1 805 aaPredicted RBP14.41□□□□□ -0.1
HLA-DQB1-202ENST00000399079 NOL6Q9H6R4 1146 aaKnown RBP14.41□□□□□ -0.1
HLA-DQB1-202ENST00000399079 SARDHQ9UL12 918 aa14.41□□□□□ -0.1
HLA-DQB1-202ENST00000399079 NUP205Q92621 2012 aa14.41□□□□□ -0.1
HLA-DQB1-202ENST00000399079 RAMP2O60895 175 aa14.41□□□□□ -0.1
HLA-DQB1-202ENST00000399079 IL1BP01584 269 aa14.41□□□□□ -0.1
HLA-DQB1-202ENST00000399079 MAOBP27338 520 aa14.41□□□□□ -0.1
HLA-DQB1-202ENST00000399079 OXTRP30559 389 aa14.41□□□□□ -0.1
HLA-DQB1-202ENST00000399079 SLC8A1P32418 973 aa14.41□□□□□ -0.1
HLA-DQB1-202ENST00000399079 TPI1P60174 286 aa14.41□□□□□ -0.1
HLA-DQB1-202ENST00000399079 ELAVL3Q14576 367 aaKnown RBP14.41□□□□□ -0.1
HLA-DQB1-202ENST00000399079 POLD3Q15054 466 aaPredicted RBP14.41□□□□□ -0.1
HLA-DQB1-202ENST00000399079 SMTNL2Q2TAL5 461 aa14.41□□□□□ -0.1
HLA-DQB1-202ENST00000399079 TTC31Q49AM3 519 aaPredicted RBP14.41□□□□□ -0.1
HLA-DQB1-202ENST00000399079 PPP6R3Q5H9R7 873 aaPredicted RBP14.41□□□□□ -0.1
HLA-DQB1-202ENST00000399079 TXNRD3NBQ6F5E7 133 aa14.41□□□□□ -0.1
HLA-DQB1-202ENST00000399079 LEKR1Q6ZMV7 388 aa14.41□□□□□ -0.1
HLA-DQB1-202ENST00000399079 SYT12Q8IV01 421 aa14.41□□□□□ -0.1
HLA-DQB1-202ENST00000399079 RTL3Q8N8U3 475 aaKnown RBP14.41□□□□□ -0.1
HLA-DQB1-202ENST00000399079 GANCQ8TET4 914 aa14.41□□□□□ -0.1
HLA-DQB1-202ENST00000399079 CCDC42Q96M95 316 aa14.41□□□□□ -0.1
HLA-DQB1-202ENST00000399079 KCTD15Q96SI1 283 aaPredicted RBP14.41□□□□□ -0.1
HLA-DQB1-202ENST00000399079 TNKS2Q9H2K2 1166 aa14.41□□□□□ -0.1
HLA-DQB1-202ENST00000399079 PABPC3Q9H361 631 aaKnown RBP14.41□□□□□ -0.1
HLA-DQB1-202ENST00000399079 RETREG1Q9H6L5 497 aa14.41□□□□□ -0.1
HLA-DQB1-202ENST00000399079 ZWILCHQ9H900 591 aa14.41□□□□□ -0.1
HLA-DQB1-202ENST00000399079 VPS45Q9NRW7 570 aa14.41□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms