RNA–Protein interactions for RNA: ENST00000398661.6

HMGCLL1-205, Transcript of 3-hydroxymethyl-3-methylglutaryl-CoA lyase like 1, humanhuman

TSL 2 BASIC

Gene HMGCLL1, Length 2,532 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1-205ENST00000398661 PSMD12O00232 456 aaPredicted RBP10.34□□□□□ -0.75
HMGCLL1-205ENST00000398661 PPEF2O14830 753 aa10.34□□□□□ -0.75
HMGCLL1-205ENST00000398661 TLR3O15455 904 aaKnown RBP10.34□□□□□ -0.75
HMGCLL1-205ENST00000398661 EXTL3O43909 919 aa10.34□□□□□ -0.75
HMGCLL1-205ENST00000398661 CNOT3O75175 753 aaKnown RBP10.34□□□□□ -0.75
HMGCLL1-205ENST00000398661 LYPLA1O75608 230 aaPredicted RBP10.34□□□□□ -0.75
HMGCLL1-205ENST00000398661 RFPL1O75677 317 aa10.34□□□□□ -0.75
HMGCLL1-205ENST00000398661 COX4I1P13073 169 aa10.34□□□□□ -0.75
HMGCLL1-205ENST00000398661 CD52P31358 61 aa10.34□□□□□ -0.75
HMGCLL1-205ENST00000398661 TXNL4AP83876 142 aaKnown RBP10.34□□□□□ -0.75
HMGCLL1-205ENST00000398661 KCNC4Q03721 635 aa10.34□□□□□ -0.75
HMGCLL1-205ENST00000398661 IRF5Q13568 498 aa10.34□□□□□ -0.75
HMGCLL1-205ENST00000398661 PDE1CQ14123 709 aaPredicted RBP10.34□□□□□ -0.75
HMGCLL1-205ENST00000398661 ARCQ7LC44 396 aa10.34□□□□□ -0.75
HMGCLL1-205ENST00000398661 GPR141Q7Z602 305 aa10.34□□□□□ -0.75
HMGCLL1-205ENST00000398661 PPM1NQ8N819 430 aa10.34□□□□□ -0.75
HMGCLL1-205ENST00000398661 ARRDC4Q8NCT1 418 aa10.34□□□□□ -0.75
HMGCLL1-205ENST00000398661 PPP1R14CQ8TAE6 165 aa10.34□□□□□ -0.75
HMGCLL1-205ENST00000398661 STARD8Q92502 1023 aa10.34□□□□□ -0.75
HMGCLL1-205ENST00000398661 EME1Q96AY2 570 aa10.34□□□□□ -0.75
HMGCLL1-205ENST00000398661 C18orf25Q96B23 403 aaPredicted RBP10.34□□□□□ -0.75
HMGCLL1-205ENST00000398661 THAP11Q96EK4 314 aa10.34□□□□□ -0.75
HMGCLL1-205ENST00000398661 ZMAT2Q96NC0 199 aaKnown RBP10.34□□□□□ -0.75
HMGCLL1-205ENST00000398661 C11orf70Q9BRQ4 267 aa10.34□□□□□ -0.75
HMGCLL1-205ENST00000398661 PTPRHQ9HD43 1115 aa10.34□□□□□ -0.75
HMGCLL1-205ENST00000398661 EPS15L1Q9UBC2 864 aa10.34□□□□□ -0.75
HMGCLL1-205ENST00000398661 CDH7Q9ULB5 785 aa10.34□□□□□ -0.75
HMGCLL1-205ENST00000398661 MYRFQ9Y2G1 1151 aa10.34□□□□□ -0.75
HMGCLL1-205ENST00000398661 CNTNAP2Q9UHC6 1331 aa10.34□□□□□ -0.75
HMGCLL1-205ENST00000398661 LACTBL1A8MY62 500 aa10.33□□□□□ -0.76
HMGCLL1-205ENST00000398661 NDUFB5O43674 189 aa10.33□□□□□ -0.76
HMGCLL1-205ENST00000398661 BMP10O95393 424 aa10.33□□□□□ -0.76
HMGCLL1-205ENST00000398661 VNN1O95497 513 aa10.33□□□□□ -0.76
HMGCLL1-205ENST00000398661 IDH3AP50213 366 aa10.33□□□□□ -0.76
HMGCLL1-205ENST00000398661 EFNA5P52803 228 aa10.33□□□□□ -0.76
HMGCLL1-205ENST00000398661 RPS3AP61247 264 aaKnown RBP10.33□□□□□ -0.76
HMGCLL1-205ENST00000398661 SEPT6Q14141 434 aa10.33□□□□□ -0.76
HMGCLL1-205ENST00000398661 KRT39Q6A163 491 aa10.33□□□□□ -0.76
HMGCLL1-205ENST00000398661 C16orf87Q6PH81 154 aa10.33□□□□□ -0.76
HMGCLL1-205ENST00000398661 MPZL3Q6UWV2 235 aa10.33□□□□□ -0.76
HMGCLL1-205ENST00000398661 RNF180Q86T96 592 aa10.33□□□□□ -0.76
HMGCLL1-205ENST00000398661 CTAGE3PQ8IX95 158 aa10.33□□□□□ -0.76
HMGCLL1-205ENST00000398661 C12orf56Q8IXR9 622 aa10.33□□□□□ -0.76
HMGCLL1-205ENST00000398661 TBC1D15Q8TC07 691 aa10.33□□□□□ -0.76
HMGCLL1-205ENST00000398661 KBTBD7Q8WVZ9 684 aa10.33□□□□□ -0.76
HMGCLL1-205ENST00000398661 FBXL18Q96ME1 805 aa10.33□□□□□ -0.76
HMGCLL1-205ENST00000398661 RTKNQ9BST9 563 aa10.33□□□□□ -0.76
HMGCLL1-205ENST00000398661 XRN2Q9H0D6 950 aaKnown RBP eCLIP10.33□□□□□ -0.76
HMGCLL1-205ENST00000398661 HIPK3Q9H422 1215 aa10.33□□□□□ -0.76
HMGCLL1-205ENST00000398661 APOBEC3GQ9HC16 384 aaKnown RBP10.33□□□□□ -0.76
HMGCLL1-205ENST00000398661 CNOT11Q9UKZ1 510 aaKnown RBP10.33□□□□□ -0.76
HMGCLL1-205ENST00000398661 ZNF701M0R085 212 aaPredicted RBP10.33□□□□□ -0.76
HMGCLL1-205ENST00000398661 HCRTO43612 131 aa10.33□□□□□ -0.76
HMGCLL1-205ENST00000398661 C8BP07358 591 aa10.33□□□□□ -0.76
HMGCLL1-205ENST00000398661 MYL4P12829 197 aa10.33□□□□□ -0.76
HMGCLL1-205ENST00000398661 DARSP14868 501 aaKnown RBP10.33□□□□□ -0.76
HMGCLL1-205ENST00000398661 NELFEP18615 380 aaKnown RBP10.33□□□□□ -0.76
HMGCLL1-205ENST00000398661 NCF2P19878 526 aaPredicted RBP10.33□□□□□ -0.76
HMGCLL1-205ENST00000398661 PTPN7P35236 360 aa10.33□□□□□ -0.76
HMGCLL1-205ENST00000398661 RAP1GAPP47736 663 aa10.33□□□□□ -0.76
HMGCLL1-205ENST00000398661 ESRRGP62508 458 aa10.33□□□□□ -0.76
HMGCLL1-205ENST00000398661 FLOT2Q14254 428 aa10.33□□□□□ -0.76
HMGCLL1-205ENST00000398661 INAQ16352 499 aa10.33□□□□□ -0.76
HMGCLL1-205ENST00000398661 SLC10A6Q3KNW5 377 aa10.33□□□□□ -0.76
HMGCLL1-205ENST00000398661 TFDP3Q5H9I0 405 aa10.33□□□□□ -0.76
HMGCLL1-205ENST00000398661 ZNF618Q5T7W0 954 aa10.33□□□□□ -0.76
HMGCLL1-205ENST00000398661 JADE1Q6IE81 842 aa10.33□□□□□ -0.76
HMGCLL1-205ENST00000398661 MAVSQ7Z434 540 aa10.33□□□□□ -0.76
HMGCLL1-205ENST00000398661 SLC7A5P1Q8MH63 180 aa10.33□□□□□ -0.76
HMGCLL1-205ENST00000398661 PHTF2Q8N3S3 785 aa10.33□□□□□ -0.76
HMGCLL1-205ENST00000398661 GLT1D1Q96MS3 346 aa10.33□□□□□ -0.76
HMGCLL1-205ENST00000398661 SERPINI1Q99574 410 aa10.33□□□□□ -0.76
HMGCLL1-205ENST00000398661 TMEM134Q9H6X4 195 aa10.33□□□□□ -0.76
HMGCLL1-205ENST00000398661 ANLNQ9NQW6 1124 aa10.33□□□□□ -0.76
HMGCLL1-205ENST00000398661 STARD7Q9NQZ5 370 aa10.33□□□□□ -0.76
HMGCLL1-205ENST00000398661 DNAJC28Q9NX36 388 aa10.33□□□□□ -0.76
HMGCLL1-205ENST00000398661 GIN1Q9NXP7 522 aa10.33□□□□□ -0.76
HMGCLL1-205ENST00000398661 SCHIP1Q9P0W5 487 aaPredicted RBP10.33□□□□□ -0.76
HMGCLL1-205ENST00000398661 NXF1Q9UBU9 619 aaKnown RBP10.33□□□□□ -0.76
HMGCLL1-205ENST00000398661 GNPTGQ9UJJ9 305 aa10.33□□□□□ -0.76
HMGCLL1-205ENST00000398661 PRPF19Q9UMS4 504 aaKnown RBP10.33□□□□□ -0.76
HMGCLL1-205ENST00000398661 COQ4Q9Y3A0 265 aa10.33□□□□□ -0.76
HMGCLL1-205ENST00000398661 PRSS51A0A1B0GVH4 220 aa10.32□□□□□ -0.76
HMGCLL1-205ENST00000398661 ARHGEF37A1IGU5 675 aa10.32□□□□□ -0.76
HMGCLL1-205ENST00000398661 RRN3P2A6NIE6 340 aa10.32□□□□□ -0.76
HMGCLL1-205ENST00000398661 MGEA5O60502 916 aa10.32□□□□□ -0.76
HMGCLL1-205ENST00000398661 SPAG6O75602 509 aa10.32□□□□□ -0.76
HMGCLL1-205ENST00000398661 SULT1C4O75897 302 aa10.32□□□□□ -0.76
HMGCLL1-205ENST00000398661 ESRRBO95718 433 aa10.32□□□□□ -0.76
HMGCLL1-205ENST00000398661 CFHP08603 1231 aa10.32□□□□□ -0.76
HMGCLL1-205ENST00000398661 INHBBP09529 407 aa10.32□□□□□ -0.76
HMGCLL1-205ENST00000398661 CCL5P13501 91 aa10.32□□□□□ -0.76
HMGCLL1-205ENST00000398661 CDH8P55286 799 aa10.32□□□□□ -0.76
HMGCLL1-205ENST00000398661 MYL6P60660 151 aa10.32□□□□□ -0.76
HMGCLL1-205ENST00000398661 CTBSQ01459 385 aa10.32□□□□□ -0.76
HMGCLL1-205ENST00000398661 ZBED5Q49AG3 693 aa10.32□□□□□ -0.76
HMGCLL1-205ENST00000398661 TEDDM1Q5T9Z0 273 aa10.32□□□□□ -0.76
HMGCLL1-205ENST00000398661 LGSNQ5TDP6 509 aa10.32□□□□□ -0.76
HMGCLL1-205ENST00000398661 METTL21CQ5VZV1 264 aa10.32□□□□□ -0.76
HMGCLL1-205ENST00000398661 EGFLAMQ63HQ2 1017 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms