RNA–Protein interactions for RNA: ENST00000398431.2

TFF3-202, Transcript of trefoil factor 3, humanhuman

TSL 3

Gene TFF3, Length 452 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFF3-202ENST00000398431 CDK17Q00537 523 aa12.37□□□□□ -0.43
TFF3-202ENST00000398431 INSM1Q01101 510 aaPredicted RBP12.37□□□□□ -0.43
TFF3-202ENST00000398431 APBA1Q02410 837 aa12.37□□□□□ -0.43
TFF3-202ENST00000398431 OVGP1Q12889 678 aa12.37□□□□□ -0.43
TFF3-202ENST00000398431 STAT4Q14765 748 aa12.37□□□□□ -0.43
TFF3-202ENST00000398431 POM121L1PQ3SYA9 428 aa12.37□□□□□ -0.43
TFF3-202ENST00000398431 ARTNQ5T4W7 220 aa12.37□□□□□ -0.43
TFF3-202ENST00000398431 Q6ZVU0 165 aa12.37□□□□□ -0.43
TFF3-202ENST00000398431 SH2D3CQ8N5H7 860 aa12.37□□□□□ -0.43
TFF3-202ENST00000398431 TMEM145Q8NBT3 493 aa12.37□□□□□ -0.43
TFF3-202ENST00000398431 OR8D1Q8WZ84 308 aa12.37□□□□□ -0.43
TFF3-202ENST00000398431 UBL7Q96S82 380 aaPredicted RBP12.37□□□□□ -0.43
TFF3-202ENST00000398431 PSMB7Q99436 277 aa12.37□□□□□ -0.43
TFF3-202ENST00000398431 ANLNQ9NQW6 1124 aa12.37□□□□□ -0.43
TFF3-202ENST00000398431 ASNSD1Q9NWL6 643 aa12.37□□□□□ -0.43
TFF3-202ENST00000398431 DDIT4Q9NX09 232 aa12.37□□□□□ -0.43
TFF3-202ENST00000398431 VANGL2Q9ULK5 521 aa12.37□□□□□ -0.43
TFF3-202ENST00000398431 TBC1D30Q9Y2I9 924 aa12.37□□□□□ -0.43
TFF3-202ENST00000398431 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.37□□□□□ -0.43
TFF3-202ENST00000398431 HS3ST4Q9Y661 456 aa12.37□□□□□ -0.43
TFF3-202ENST00000398431 AK5Q9Y6K8 562 aa12.37□□□□□ -0.43
TFF3-202ENST00000398431 GCN1Q92616 2671 aaKnown RBP12.37□□□□□ -0.43
TFF3-202ENST00000398431 SYNJ2BP-COX16A0A087WUM0 186 aa12.36□□□□□ -0.43
TFF3-202ENST00000398431 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP12.36□□□□□ -0.43
TFF3-202ENST00000398431 GOLGA6L4A6NEF3 574 aa12.36□□□□□ -0.43
TFF3-202ENST00000398431 PRAMEF26H0Y7S4 382 aa12.36□□□□□ -0.43
TFF3-202ENST00000398431 ALOX15BO15296 676 aa12.36□□□□□ -0.43
TFF3-202ENST00000398431 MAGEC1O60732 1142 aa12.36□□□□□ -0.43
TFF3-202ENST00000398431 GRAP2O75791 330 aa12.36□□□□□ -0.43
TFF3-202ENST00000398431 CNTN5O94779 1100 aa12.36□□□□□ -0.43
TFF3-202ENST00000398431 GNA14O95837 355 aa12.36□□□□□ -0.43
TFF3-202ENST00000398431 CTSLP07711 333 aa12.36□□□□□ -0.43
TFF3-202ENST00000398431 SLC2A3P11169 496 aa12.36□□□□□ -0.43
TFF3-202ENST00000398431 SLC9A1P19634 815 aa12.36□□□□□ -0.43
TFF3-202ENST00000398431 GNA15P30679 374 aa12.36□□□□□ -0.43
TFF3-202ENST00000398431 NUDT1P36639 197 aa12.36□□□□□ -0.43
TFF3-202ENST00000398431 GGCXP38435 758 aa12.36□□□□□ -0.43
TFF3-202ENST00000398431 OXCT1P55809 520 aa12.36□□□□□ -0.43
TFF3-202ENST00000398431 ZNF177Q13360 481 aaPredicted RBP12.36□□□□□ -0.43
TFF3-202ENST00000398431 ACCSLQ4AC99 568 aa12.36□□□□□ -0.43
TFF3-202ENST00000398431 EFHC1Q5JVL4 640 aa12.36□□□□□ -0.43
TFF3-202ENST00000398431 RABGAP1LQ5R372 815 aa12.36□□□□□ -0.43
TFF3-202ENST00000398431 PIP5KL1Q5T9C9 394 aa12.36□□□□□ -0.43
TFF3-202ENST00000398431 TTC39BQ5VTQ0 682 aaPredicted RBP12.36□□□□□ -0.43
TFF3-202ENST00000398431 OTUD1Q5VV17 481 aaPredicted RBP12.36□□□□□ -0.43
TFF3-202ENST00000398431 FAM46CQ5VWP2 391 aa12.36□□□□□ -0.43
TFF3-202ENST00000398431 CLEC17AQ6ZS10 378 aa12.36□□□□□ -0.43
TFF3-202ENST00000398431 ZNF683Q8IZ20 524 aa12.36□□□□□ -0.43
TFF3-202ENST00000398431 DCBLD1Q8N8Z6 715 aa12.36□□□□□ -0.43
TFF3-202ENST00000398431 SNIP1Q8TAD8 396 aaKnown RBP12.36□□□□□ -0.43
TFF3-202ENST00000398431 KLK6Q92876 244 aa12.36□□□□□ -0.43
TFF3-202ENST00000398431 ARRDC3Q96B67 414 aa12.36□□□□□ -0.43
TFF3-202ENST00000398431 KLHDC7BQ96G42 594 aa12.36□□□□□ -0.43
TFF3-202ENST00000398431 RPRD1AQ96P16 312 aaPredicted RBP12.36□□□□□ -0.43
TFF3-202ENST00000398431 GBP4Q96PP9 640 aa12.36□□□□□ -0.43
TFF3-202ENST00000398431 CRACR2AQ9BSW2 395 aa12.36□□□□□ -0.43
TFF3-202ENST00000398431 UCKL1Q9NWZ5 548 aa12.36□□□□□ -0.43
TFF3-202ENST00000398431 COX16Q9P0S2 106 aa12.36□□□□□ -0.43
TFF3-202ENST00000398431 CTNND2Q9UQB3 1225 aa12.36□□□□□ -0.43
TFF3-202ENST00000398431 BICDL2A1A5D9 508 aa12.35□□□□□ -0.43
TFF3-202ENST00000398431 K7ERQ8 282 aa12.35□□□□□ -0.43
TFF3-202ENST00000398431 SLC31A1O15431 190 aa12.35□□□□□ -0.43
TFF3-202ENST00000398431 SNAP91O60641 907 aa12.35□□□□□ -0.43
TFF3-202ENST00000398431 RNGTTO60942 597 aaKnown RBP12.35□□□□□ -0.43
TFF3-202ENST00000398431 PAGE1O75459 146 aa12.35□□□□□ -0.43
TFF3-202ENST00000398431 ZIC2O95409 532 aaPredicted RBP12.35□□□□□ -0.43
TFF3-202ENST00000398431 SRCP12931 536 aa12.35□□□□□ -0.43
TFF3-202ENST00000398431 TFE3P19532 575 aaPredicted RBP12.35□□□□□ -0.43
TFF3-202ENST00000398431 GLDCP23378 1020 aa12.35□□□□□ -0.43
TFF3-202ENST00000398431 DGKAP23743 735 aa12.35□□□□□ -0.43
TFF3-202ENST00000398431 ZNF211Q13398 564 aaPredicted RBP12.35□□□□□ -0.43
TFF3-202ENST00000398431 ZNF284Q2VY69 593 aa12.35□□□□□ -0.43
TFF3-202ENST00000398431 ALFQ53S48 1182 aa12.35□□□□□ -0.43
TFF3-202ENST00000398431 TRIM65Q6PJ69 517 aa12.35□□□□□ -0.43
TFF3-202ENST00000398431 OLFML1Q6UWY5 402 aa12.35□□□□□ -0.43
TFF3-202ENST00000398431 FAM183BPQ6ZVS7 135 aa12.35□□□□□ -0.43
TFF3-202ENST00000398431 ENOSF1Q7L5Y1 443 aa12.35□□□□□ -0.43
TFF3-202ENST00000398431 DSG4Q86SJ6 1040 aa12.35□□□□□ -0.43
TFF3-202ENST00000398431 OR2A12Q8NGT7 310 aa12.35□□□□□ -0.43
TFF3-202ENST00000398431 SLC39A7Q92504 469 aa12.35□□□□□ -0.43
TFF3-202ENST00000398431 FGF11Q92914 225 aa12.35□□□□□ -0.43
TFF3-202ENST00000398431 PPP1R13BQ96KQ4 1090 aa12.35□□□□□ -0.43
TFF3-202ENST00000398431 PPP1R9BQ96SB3 815 aa12.35□□□□□ -0.43
TFF3-202ENST00000398431 FAM204AQ9H8W3 233 aa12.35□□□□□ -0.43
TFF3-202ENST00000398431 PREBQ9HCU5 417 aa12.35□□□□□ -0.43
TFF3-202ENST00000398431 KLHL11Q9NVR0 708 aa12.35□□□□□ -0.43
TFF3-202ENST00000398431 HOOK1Q9UJC3 728 aaKnown RBP12.35□□□□□ -0.43
TFF3-202ENST00000398431 SLC25A13Q9UJS0 675 aa12.35□□□□□ -0.43
TFF3-202ENST00000398431 PCDHGC3Q9UN70 934 aa12.35□□□□□ -0.43
TFF3-202ENST00000398431 ZFR2Q9UPR6 939 aaKnown RBP12.35□□□□□ -0.43
TFF3-202ENST00000398431 CLCA2Q9UQC9 943 aa12.35□□□□□ -0.43
TFF3-202ENST00000398431 HS3ST2Q9Y278 367 aa12.35□□□□□ -0.43
TFF3-202ENST00000398431 SNX10Q9Y5X0 201 aa12.35□□□□□ -0.43
TFF3-202ENST00000398431 A0A1W2PQU0 124 aa12.34□□□□□ -0.43
TFF3-202ENST00000398431 EIF4E1BA6NMX2 242 aaKnown RBP12.34□□□□□ -0.43
TFF3-202ENST00000398431 C1QTNF3-AMACRE9PGA6 284 aa12.34□□□□□ -0.43
TFF3-202ENST00000398431 TK2O00142 265 aa12.34□□□□□ -0.43
TFF3-202ENST00000398431 BIN1O00499 593 aa12.34□□□□□ -0.43
TFF3-202ENST00000398431 ATXN7O15265 892 aaPredicted RBP12.34□□□□□ -0.43
TFF3-202ENST00000398431 SMAD6O43541 496 aaKnown RBP12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms