RNA–Protein interactions for RNA: ENST00000397611.7

PTPRD-205, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 5 BASIC

Gene PTPRD, Length 8,242 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-205ENST00000397611 TTLL13PA6NNM8 815 aa5.55□□□□□ -1.52
PTPRD-205ENST00000397611 PHGDHO43175 533 aaKnown RBP5.55□□□□□ -1.52
PTPRD-205ENST00000397611 CBFA2T3O75081 653 aa5.55□□□□□ -1.52
PTPRD-205ENST00000397611 APRTP07741 180 aa5.55□□□□□ -1.52
PTPRD-205ENST00000397611 SLURP2P0DP57 97 aa5.55□□□□□ -1.52
PTPRD-205ENST00000397611 ANKRD22Q5VYY1 191 aa5.55□□□□□ -1.52
PTPRD-205ENST00000397611 AHI1Q8N157 1196 aa5.55□□□□□ -1.52
PTPRD-205ENST00000397611 PCDH19Q8TAB3 1148 aa5.55□□□□□ -1.52
PTPRD-205ENST00000397611 RXFP2Q8WXD0 754 aa5.55□□□□□ -1.52
PTPRD-205ENST00000397611 C11orf84Q9BUA3 381 aaPredicted RBP5.55□□□□□ -1.52
PTPRD-205ENST00000397611 MROH8Q9H579 483 aa5.55□□□□□ -1.52
PTPRD-205ENST00000397611 ZMPSTE24O75844 475 aa5.55□□□□□ -1.52
PTPRD-205ENST00000397611 FBXO21O94952 628 aa5.55□□□□□ -1.52
PTPRD-205ENST00000397611 UQCRBP14927 111 aa5.55□□□□□ -1.52
PTPRD-205ENST00000397611 PGAM1P18669 254 aa5.55□□□□□ -1.52
PTPRD-205ENST00000397611 IL1R2P27930 398 aa5.55□□□□□ -1.52
PTPRD-205ENST00000397611 GRIK2Q13002 908 aa5.55□□□□□ -1.52
PTPRD-205ENST00000397611 UBAP2LQ14157 1087 aaKnown RBP5.55□□□□□ -1.52
PTPRD-205ENST00000397611 TLK2Q86UE8 772 aa5.55□□□□□ -1.52
PTPRD-205ENST00000397611 PQLC3Q8N755 202 aa5.55□□□□□ -1.52
PTPRD-205ENST00000397611 ERAP1Q9NZ08 941 aa5.55□□□□□ -1.52
PTPRD-205ENST00000397611 JAK1P23458 1154 aa5.55□□□□□ -1.52
PTPRD-205ENST00000397611 PSMA4P25789 261 aaKnown RBP5.55□□□□□ -1.52
PTPRD-205ENST00000397611 NME5P56597 212 aa5.55□□□□□ -1.52
PTPRD-205ENST00000397611 FASTKD3Q14CZ7 662 aaKnown RBP5.55□□□□□ -1.52
PTPRD-205ENST00000397611 DCAF4L1Q3SXM0 396 aa5.55□□□□□ -1.52
PTPRD-205ENST00000397611 PACRGLQ8N7B6 248 aa5.55□□□□□ -1.52
PTPRD-205ENST00000397611 BHLHE22Q8NFJ8 381 aaPredicted RBP5.55□□□□□ -1.52
PTPRD-205ENST00000397611 RP9Q8TA86 221 aaKnown RBP5.55□□□□□ -1.52
PTPRD-205ENST00000397611 JOSD2Q8TAC2 188 aa5.55□□□□□ -1.52
PTPRD-205ENST00000397611 PEX13Q92968 403 aa5.55□□□□□ -1.52
PTPRD-205ENST00000397611 KLRG1Q96E93 195 aa5.55□□□□□ -1.52
PTPRD-205ENST00000397611 TRIM39Q9HCM9 518 aa5.55□□□□□ -1.52
PTPRD-205ENST00000397611 UBQLN1Q9UMX0 589 aaKnown RBP5.55□□□□□ -1.52
PTPRD-205ENST00000397611 AK5Q9Y6K8 562 aa5.55□□□□□ -1.52
PTPRD-205ENST00000397611 WASF2Q9Y6W5 498 aa5.55□□□□□ -1.52
PTPRD-205ENST00000397611 SIPA1L1O43166 1804 aa5.55□□□□□ -1.52
PTPRD-205ENST00000397611 ZNF701M0R085 212 aaPredicted RBP5.55□□□□□ -1.52
PTPRD-205ENST00000397611 IL4RP24394 825 aa5.55□□□□□ -1.52
PTPRD-205ENST00000397611 BCAT1P54687 386 aa5.55□□□□□ -1.52
PTPRD-205ENST00000397611 PRUNE1Q86TP1 453 aa5.55□□□□□ -1.52
PTPRD-205ENST00000397611 SLC51AQ86UW1 340 aa5.55□□□□□ -1.52
PTPRD-205ENST00000397611 MARVELD2Q8N4S9 558 aa5.55□□□□□ -1.52
PTPRD-205ENST00000397611 DUS3LQ96G46 650 aaKnown RBP5.55□□□□□ -1.52
PTPRD-205ENST00000397611 WNK4Q96J92 1243 aa5.55□□□□□ -1.52
PTPRD-205ENST00000397611 EXOSC4Q9NPD3 245 aaKnown RBP5.55□□□□□ -1.52
PTPRD-205ENST00000397611 PLA2G4CQ9UP65 541 aa5.55□□□□□ -1.52
PTPRD-205ENST00000397611 GSNP06396 782 aa5.55□□□□□ -1.52
PTPRD-205ENST00000397611 CDH3P22223 829 aa5.55□□□□□ -1.52
PTPRD-205ENST00000397611 IREB2P48200 963 aaKnown RBP5.55□□□□□ -1.52
PTPRD-205ENST00000397611 HIRAP54198 1017 aaPredicted RBP5.55□□□□□ -1.52
PTPRD-205ENST00000397611 PKNOX1P55347 436 aa5.55□□□□□ -1.52
PTPRD-205ENST00000397611 MTMR2Q13614 643 aa5.55□□□□□ -1.52
PTPRD-205ENST00000397611 FUT11Q495W5 492 aa5.55□□□□□ -1.52
PTPRD-205ENST00000397611 EGFLAMQ63HQ2 1017 aa5.55□□□□□ -1.52
PTPRD-205ENST00000397611 ANGPTL8Q6UXH0 198 aa5.55□□□□□ -1.52
PTPRD-205ENST00000397611 CYP2R1Q6VVX0 501 aa5.55□□□□□ -1.52
PTPRD-205ENST00000397611 TREML1Q86YW5 311 aa5.55□□□□□ -1.52
PTPRD-205ENST00000397611 SCML4Q8N228 414 aa5.55□□□□□ -1.52
PTPRD-205ENST00000397611 C7orf31Q8N865 590 aa5.55□□□□□ -1.52
PTPRD-205ENST00000397611 TNIP2Q8NFZ5 429 aa5.55□□□□□ -1.52
PTPRD-205ENST00000397611 CCDC126Q96EE4 140 aa5.55□□□□□ -1.52
PTPRD-205ENST00000397611 SGF29Q96ES7 293 aa5.55□□□□□ -1.52
PTPRD-205ENST00000397611 CLPTM1LQ96KA5 538 aa5.55□□□□□ -1.52
PTPRD-205ENST00000397611 TNIP3Q96KP6 325 aa5.55□□□□□ -1.52
PTPRD-205ENST00000397611 SPATA16Q9BXB7 569 aa5.55□□□□□ -1.52
PTPRD-205ENST00000397611 PRKD2Q9BZL6 878 aa5.55□□□□□ -1.52
PTPRD-205ENST00000397611 MTMR12Q9C0I1 747 aa5.55□□□□□ -1.52
PTPRD-205ENST00000397611 SLC17A7Q9P2U7 560 aa5.55□□□□□ -1.52
PTPRD-205ENST00000397611 AP4B1Q9Y6B7 739 aa5.55□□□□□ -1.52
PTPRD-205ENST00000397611 TADA2AO75478 443 aa5.54□□□□□ -1.52
PTPRD-205ENST00000397611 BANF1O75531 89 aa5.54□□□□□ -1.52
PTPRD-205ENST00000397611 CSPG5O95196 566 aa5.54□□□□□ -1.52
PTPRD-205ENST00000397611 POLBP06746 335 aa5.54□□□□□ -1.52
PTPRD-205ENST00000397611 MYL3P08590 195 aa5.54□□□□□ -1.52
PTPRD-205ENST00000397611 LIMK2P53671 638 aa5.54□□□□□ -1.52
PTPRD-205ENST00000397611 MSLNQ13421 630 aaPredicted RBP5.54□□□□□ -1.52
PTPRD-205ENST00000397611 MSS51Q4VC12 460 aa5.54□□□□□ -1.52
PTPRD-205ENST00000397611 CEP78Q5JTW2 689 aa5.54□□□□□ -1.52
PTPRD-205ENST00000397611 PACS1Q6VY07 963 aa5.54□□□□□ -1.52
PTPRD-205ENST00000397611 UNC5AQ6ZN44 842 aa5.54□□□□□ -1.52
PTPRD-205ENST00000397611 CLEC14AQ86T13 490 aa5.54□□□□□ -1.52
PTPRD-205ENST00000397611 KBTBD2Q8IY47 623 aa5.54□□□□□ -1.52
PTPRD-205ENST00000397611 RNF149Q8NC42 400 aa5.54□□□□□ -1.52
PTPRD-205ENST00000397611 GSTCDQ8NEC7 633 aa5.54□□□□□ -1.52
PTPRD-205ENST00000397611 PPP1R16BQ96T49 567 aa5.54□□□□□ -1.52
PTPRD-205ENST00000397611 TUBA8Q9NY65 449 aaPredicted RBP5.54□□□□□ -1.52
PTPRD-205ENST00000397611 NIPSNAP3AQ9UFN0 247 aaPredicted RBP5.54□□□□□ -1.52
PTPRD-205ENST00000397611 TBKBP1A7MCY6 615 aa5.54□□□□□ -1.52
PTPRD-205ENST00000397611 DENRO43583 198 aaKnown RBP5.54□□□□□ -1.52
PTPRD-205ENST00000397611 ZSCAN5DPP0CG00 497 aa5.54□□□□□ -1.52
PTPRD-205ENST00000397611 AXLP30530 894 aa5.54□□□□□ -1.52
PTPRD-205ENST00000397611 NPY2RP49146 381 aa5.54□□□□□ -1.52
PTPRD-205ENST00000397611 DMC1Q14565 340 aa5.54□□□□□ -1.52
PTPRD-205ENST00000397611 ANKRD52Q8NB46 1076 aa5.54□□□□□ -1.52
PTPRD-205ENST00000397611 DRAXINQ8NBI3 349 aaPredicted RBP5.54□□□□□ -1.52
PTPRD-205ENST00000397611 VPS39Q96JC1 886 aa5.54□□□□□ -1.52
PTPRD-205ENST00000397611 GPR25O00155 361 aa5.54□□□□□ -1.52
PTPRD-205ENST00000397611 CST3P01034 146 aaPredicted RBP5.54□□□□□ -1.52
PTPRD-205ENST00000397611 RALBP11234 206 aa5.54□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms