RNA–Protein interactions for RNA: ENST00000397417.6

IFT140-202, Transcript of intraflagellar transport 140, humanhuman

TSL 5

Gene IFT140, Length 4,023 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140-202ENST00000397417 TPRP12270 2363 aaKnown RBP11.36□□□□□ -0.59
IFT140-202ENST00000397417 C2CD4BA6NLJ0 364 aa11.36□□□□□ -0.59
IFT140-202ENST00000397417 F2P00734 622 aa11.36□□□□□ -0.59
IFT140-202ENST00000397417 PRKCGP05129 697 aa11.36□□□□□ -0.59
IFT140-202ENST00000397417 TUFMP49411 452 aaKnown RBP11.36□□□□□ -0.59
IFT140-202ENST00000397417 LRRC74AQ0VAA2 488 aa11.36□□□□□ -0.59
IFT140-202ENST00000397417 HSPA14Q0VDF9 509 aa11.36□□□□□ -0.59
IFT140-202ENST00000397417 QPCTQ16769 361 aa11.36□□□□□ -0.59
IFT140-202ENST00000397417 TTC23LQ6PF05 361 aa11.36□□□□□ -0.59
IFT140-202ENST00000397417 LINC00523Q86TU6 105 aa11.36□□□□□ -0.59
IFT140-202ENST00000397417 CATSPER2Q96P56 530 aa11.36□□□□□ -0.59
IFT140-202ENST00000397417 SLC40A1Q9NP59 571 aa11.36□□□□□ -0.59
IFT140-202ENST00000397417 ARHGEF4Q9NR80 690 aa11.36□□□□□ -0.59
IFT140-202ENST00000397417 PIGVQ9NUD9 493 aa11.36□□□□□ -0.59
IFT140-202ENST00000397417 UBA2Q9UBT2 640 aaPredicted RBP11.36□□□□□ -0.59
IFT140-202ENST00000397417 SLC25A13Q9UJS0 675 aa11.36□□□□□ -0.59
IFT140-202ENST00000397417 RNF112Q9ULX5 631 aa11.36□□□□□ -0.59
IFT140-202ENST00000397417 ASXL3Q9C0F0 2248 aa11.36□□□□□ -0.59
IFT140-202ENST00000397417 DDX60Q8IY21 1712 aaKnown RBP11.36□□□□□ -0.59
IFT140-202ENST00000397417 AMHP03971 560 aa11.36□□□□□ -0.59
IFT140-202ENST00000397417 SLC8A1P32418 973 aa11.36□□□□□ -0.59
IFT140-202ENST00000397417 USP41Q3LFD5 358 aa11.36□□□□□ -0.59
IFT140-202ENST00000397417 NEPROQ6NW34 567 aa11.36□□□□□ -0.59
IFT140-202ENST00000397417 C11orf74Q86VG3 221 aa11.36□□□□□ -0.59
IFT140-202ENST00000397417 RGS18Q9NS28 235 aa11.36□□□□□ -0.59
IFT140-202ENST00000397417 ZMYM5Q9UJ78 669 aa11.36□□□□□ -0.59
IFT140-202ENST00000397417 TBC1D3BA6NDS4 549 aa11.36□□□□□ -0.59
IFT140-202ENST00000397417 ZWINTO95229 277 aa11.36□□□□□ -0.59
IFT140-202ENST00000397417 MAP4P27816 1152 aaKnown RBP11.36□□□□□ -0.59
IFT140-202ENST00000397417 PEX5P50542 639 aa11.36□□□□□ -0.59
IFT140-202ENST00000397417 DLG2Q15700 870 aa11.36□□□□□ -0.59
IFT140-202ENST00000397417 LDLRAD1Q5T700 205 aa11.36□□□□□ -0.59
IFT140-202ENST00000397417 CST9Q5W186 159 aa11.36□□□□□ -0.59
IFT140-202ENST00000397417 ELMSAN1Q6PJG2 1045 aa11.36□□□□□ -0.59
IFT140-202ENST00000397417 CLEC20AQ6ZU45 233 aa11.36□□□□□ -0.59
IFT140-202ENST00000397417 ZDHHC17Q8IUH5 632 aa11.36□□□□□ -0.59
IFT140-202ENST00000397417 PARP9Q8IXQ6 854 aa11.36□□□□□ -0.59
IFT140-202ENST00000397417 N4BP2L2Q92802 583 aaPredicted RBP11.36□□□□□ -0.59
IFT140-202ENST00000397417 HDAC10Q969S8 669 aa11.36□□□□□ -0.59
IFT140-202ENST00000397417 ESAMQ96AP7 390 aa11.36□□□□□ -0.59
IFT140-202ENST00000397417 MTBPQ96DY7 904 aa11.36□□□□□ -0.59
IFT140-202ENST00000397417 ZBED3Q96IU2 234 aaPredicted RBP11.36□□□□□ -0.59
IFT140-202ENST00000397417 GBP5Q96PP8 586 aa11.36□□□□□ -0.59
IFT140-202ENST00000397417 TRIM54Q9BYV2 358 aa11.36□□□□□ -0.59
IFT140-202ENST00000397417 FOXP3Q9BZS1 431 aa11.36□□□□□ -0.59
IFT140-202ENST00000397417 CNGB3Q9NQW8 809 aa11.36□□□□□ -0.59
IFT140-202ENST00000397417 TBC1D13Q9NVG8 400 aa11.36□□□□□ -0.59
IFT140-202ENST00000397417 WWOXQ9NZC7 414 aa11.36□□□□□ -0.59
IFT140-202ENST00000397417 SHANK3Q9BYB0 1731 aa11.36□□□□□ -0.59
IFT140-202ENST00000397417 PER2O15055 1255 aa11.35□□□□□ -0.59
IFT140-202ENST00000397417 DCXO43602 365 aa11.35□□□□□ -0.59
IFT140-202ENST00000397417 CNMDO75829 334 aa11.35□□□□□ -0.59
IFT140-202ENST00000397417 TMEM63AO94886 807 aa11.35□□□□□ -0.59
IFT140-202ENST00000397417 METTL18O95568 372 aa11.35□□□□□ -0.59
IFT140-202ENST00000397417 HNRNPLP14866 589 aaKnown RBP eCLIP11.35□□□□□ -0.59
IFT140-202ENST00000397417 GP5P40197 560 aa11.35□□□□□ -0.59
IFT140-202ENST00000397417 ZNF460Q14592 562 aa11.35□□□□□ -0.59
IFT140-202ENST00000397417 ARHGAP15Q53QZ3 475 aa11.35□□□□□ -0.59
IFT140-202ENST00000397417 KRT80Q6KB66 452 aa11.35□□□□□ -0.59
IFT140-202ENST00000397417 CYP4X1Q8N118 509 aa11.35□□□□□ -0.59
IFT140-202ENST00000397417 MTFMTQ96DP5 389 aaKnown RBP11.35□□□□□ -0.59
IFT140-202ENST00000397417 TNKS2Q9H2K2 1166 aa11.35□□□□□ -0.59
IFT140-202ENST00000397417 ALG9Q9H6U8 611 aa11.35□□□□□ -0.59
IFT140-202ENST00000397417 MRPS23Q9Y3D9 190 aaKnown RBP11.35□□□□□ -0.59
IFT140-202ENST00000397417 SPAG6O75602 509 aa11.35□□□□□ -0.59
IFT140-202ENST00000397417 PDE5AO76074 875 aa11.35□□□□□ -0.59
IFT140-202ENST00000397417 MZF1P28698 734 aaPredicted RBP11.35□□□□□ -0.59
IFT140-202ENST00000397417 CDC25CP30307 473 aa11.35□□□□□ -0.59
IFT140-202ENST00000397417 WNT3AP56704 352 aa11.35□□□□□ -0.59
IFT140-202ENST00000397417 DSC2Q02487 901 aa11.35□□□□□ -0.59
IFT140-202ENST00000397417 SEMA5AQ13591 1074 aa11.35□□□□□ -0.59
IFT140-202ENST00000397417 STARD3Q14849 445 aa11.35□□□□□ -0.59
IFT140-202ENST00000397417 ARMC12Q5T9G4 340 aa11.35□□□□□ -0.59
IFT140-202ENST00000397417 RHBDF2Q6PJF5 856 aa11.35□□□□□ -0.59
IFT140-202ENST00000397417 TTC7BQ86TV6 843 aa11.35□□□□□ -0.59
IFT140-202ENST00000397417 TP53INP2Q8IXH6 220 aa11.35□□□□□ -0.59
IFT140-202ENST00000397417 ZNF296Q8WUU4 475 aaPredicted RBP11.35□□□□□ -0.59
IFT140-202ENST00000397417 KCTD4Q8WVF5 259 aa11.35□□□□□ -0.59
IFT140-202ENST00000397417 PIK3R5Q8WYR1 880 aa11.35□□□□□ -0.59
IFT140-202ENST00000397417 PRCCQ92733 491 aaPredicted RBP11.35□□□□□ -0.59
IFT140-202ENST00000397417 ART4Q93070 314 aa11.35□□□□□ -0.59
IFT140-202ENST00000397417 BORCS6Q96GS4 357 aa11.35□□□□□ -0.59
IFT140-202ENST00000397417 ACOX2Q99424 681 aa11.35□□□□□ -0.59
IFT140-202ENST00000397417 CLPBQ9H078 707 aa11.35□□□□□ -0.59
IFT140-202ENST00000397417 C9JVG2 144 aa11.35□□□□□ -0.59
IFT140-202ENST00000397417 RFX3P48380 749 aa11.35□□□□□ -0.59
IFT140-202ENST00000397417 USP4Q13107 963 aa11.35□□□□□ -0.59
IFT140-202ENST00000397417 HIC1Q14526 733 aa11.35□□□□□ -0.59
IFT140-202ENST00000397417 INTS6LQ5JSJ4 861 aaKnown RBP11.35□□□□□ -0.59
IFT140-202ENST00000397417 TMC5Q6UXY8 1006 aa11.35□□□□□ -0.59
IFT140-202ENST00000397417 MILR1Q7Z6M3 343 aa11.35□□□□□ -0.59
IFT140-202ENST00000397417 PSTKQ8IV42 348 aaKnown RBP11.35□□□□□ -0.59
IFT140-202ENST00000397417 C7orf61Q8IZ16 206 aa11.35□□□□□ -0.59
IFT140-202ENST00000397417 FLCNQ8NFG4 579 aa11.35□□□□□ -0.59
IFT140-202ENST00000397417 ZNF75CPQ92670 426 aaPredicted RBP11.35□□□□□ -0.59
IFT140-202ENST00000397417 ILKAPQ9H0C8 392 aaPredicted RBP11.35□□□□□ -0.59
IFT140-202ENST00000397417 SMG9Q9H0W8 520 aaKnown RBP11.35□□□□□ -0.59
IFT140-202ENST00000397417 ZDHHC4Q9NPG8 344 aa11.35□□□□□ -0.59
IFT140-202ENST00000397417 CYTH4Q9UIA0 394 aa11.35□□□□□ -0.59
IFT140-202ENST00000397417 HEATR9A2RTY3 570 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms