RNA–Protein interactions for RNA: ENST00000397163.7

CAPN3-206, Transcript of calpain 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CAPN3, Length 3,228 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-206ENST00000397163 WDR41Q9HAD4 459 aa9.35□□□□□ -0.91
CAPN3-206ENST00000397163 GBA2Q9HCG7 927 aaPredicted RBP9.35□□□□□ -0.91
CAPN3-206ENST00000397163 MFHAS1Q9Y4C4 1052 aa9.35□□□□□ -0.91
CAPN3-206ENST00000397163 A0A096LPK6 155 aa9.34□□□□□ -0.91
CAPN3-206ENST00000397163 POLBP06746 335 aa9.34□□□□□ -0.91
CAPN3-206ENST00000397163 TFE3P19532 575 aaPredicted RBP9.34□□□□□ -0.91
CAPN3-206ENST00000397163 SPRP35270 261 aaPredicted RBP9.34□□□□□ -0.91
CAPN3-206ENST00000397163 NR2C2P49116 596 aa9.34□□□□□ -0.91
CAPN3-206ENST00000397163 GTF2A2P52657 109 aa9.34□□□□□ -0.91
CAPN3-206ENST00000397163 DLG2Q15700 870 aa9.34□□□□□ -0.91
CAPN3-206ENST00000397163 GRTP1Q5TC63 336 aa9.34□□□□□ -0.91
CAPN3-206ENST00000397163 FAM160B1Q5W0V3 765 aa9.34□□□□□ -0.91
CAPN3-206ENST00000397163 SEL1L3Q68CR1 1132 aa9.34□□□□□ -0.91
CAPN3-206ENST00000397163 JADE1Q6IE81 842 aa9.34□□□□□ -0.91
CAPN3-206ENST00000397163 STRA8Q7Z7C7 330 aa9.34□□□□□ -0.91
CAPN3-206ENST00000397163 TICAM1Q8IUC6 712 aa9.34□□□□□ -0.91
CAPN3-206ENST00000397163 TSPAN14Q8NG11 270 aa9.34□□□□□ -0.91
CAPN3-206ENST00000397163 ARNTL2Q8WYA1 636 aa9.34□□□□□ -0.91
CAPN3-206ENST00000397163 DLG3Q92796 817 aa9.34□□□□□ -0.91
CAPN3-206ENST00000397163 CASP10Q92851 521 aa9.34□□□□□ -0.91
CAPN3-206ENST00000397163 PPP1R14BQ96C90 147 aa9.34□□□□□ -0.91
CAPN3-206ENST00000397163 HPDLQ96IR7 371 aa9.34□□□□□ -0.91
CAPN3-206ENST00000397163 MAML3Q96JK9 1138 aa9.34□□□□□ -0.91
CAPN3-206ENST00000397163 AGAP3Q96P47 875 aa9.34□□□□□ -0.91
CAPN3-206ENST00000397163 CPNE1Q99829 537 aa9.34□□□□□ -0.91
CAPN3-206ENST00000397163 CAB39LQ9H9S4 337 aa9.34□□□□□ -0.91
CAPN3-206ENST00000397163 CYP3A43Q9HB55 503 aa9.34□□□□□ -0.91
CAPN3-206ENST00000397163 DTLQ9NZJ0 730 aa9.34□□□□□ -0.91
CAPN3-206ENST00000397163 A8MU76 341 aa9.34□□□□□ -0.91
CAPN3-206ENST00000397163 LACTBL1A8MY62 500 aa9.34□□□□□ -0.91
CAPN3-206ENST00000397163 TMEM114B3SHH9 223 aa9.34□□□□□ -0.91
CAPN3-206ENST00000397163 DPYSL4O14531 572 aa9.34□□□□□ -0.91
CAPN3-206ENST00000397163 IL18RAPO95256 599 aa9.34□□□□□ -0.91
CAPN3-206ENST00000397163 LTFP02788 710 aa9.34□□□□□ -0.91
CAPN3-206ENST00000397163 GJB1P08034 283 aa9.34□□□□□ -0.91
CAPN3-206ENST00000397163 IRF9Q00978 393 aa9.34□□□□□ -0.91
CAPN3-206ENST00000397163 DMPKQ09013 629 aa9.34□□□□□ -0.91
CAPN3-206ENST00000397163 TMEM198Q66K66 360 aa9.34□□□□□ -0.91
CAPN3-206ENST00000397163 PMF1Q6P1K2 205 aa9.34□□□□□ -0.91
CAPN3-206ENST00000397163 CLVS1Q8IUQ0 354 aaPredicted RBP9.34□□□□□ -0.91
CAPN3-206ENST00000397163 PGAM4Q8N0Y7 254 aa9.34□□□□□ -0.91
CAPN3-206ENST00000397163 FAM156AQ8NDB6 213 aa9.34□□□□□ -0.91
CAPN3-206ENST00000397163 ZSCAN18Q8TBC5 510 aaPredicted RBP9.34□□□□□ -0.91
CAPN3-206ENST00000397163 IRGQQ8WZA9 623 aa9.34□□□□□ -0.91
CAPN3-206ENST00000397163 MARK4Q96L34 752 aa9.34□□□□□ -0.91
CAPN3-206ENST00000397163 NAT9Q9BTE0 207 aa9.34□□□□□ -0.91
CAPN3-206ENST00000397163 CDT1Q9H211 546 aa9.34□□□□□ -0.91
CAPN3-206ENST00000397163 SEMA6AQ9H2E6 1030 aa9.34□□□□□ -0.91
CAPN3-206ENST00000397163 FAM49BQ9NUQ9 324 aa9.34□□□□□ -0.91
CAPN3-206ENST00000397163 MTMR10Q9NXD2 777 aa9.34□□□□□ -0.91
CAPN3-206ENST00000397163 GGA3Q9NZ52 723 aa9.34□□□□□ -0.91
CAPN3-206ENST00000397163 SUN2Q9UH99 717 aa9.34□□□□□ -0.91
CAPN3-206ENST00000397163 PGAP2Q9UHJ9 254 aa9.34□□□□□ -0.91
CAPN3-206ENST00000397163 ZNF214Q9UL59 606 aaPredicted RBP9.34□□□□□ -0.91
CAPN3-206ENST00000397163 MAGED2Q9UNF1 606 aaPredicted RBP9.34□□□□□ -0.91
CAPN3-206ENST00000397163 AP4E1Q9UPM8 1137 aa9.34□□□□□ -0.91
CAPN3-206ENST00000397163 DOCK5Q9H7D0 1870 aa9.34□□□□□ -0.91
CAPN3-206ENST00000397163 PALM2-AKAP2B1ALY0 433 aaPredicted RBP9.33□□□□□ -0.92
CAPN3-206ENST00000397163 G3V2L1 256 aa9.33□□□□□ -0.92
CAPN3-206ENST00000397163 ACKR2O00590 384 aa9.33□□□□□ -0.92
CAPN3-206ENST00000397163 WNT10BO00744 389 aa9.33□□□□□ -0.92
CAPN3-206ENST00000397163 HDAC3O15379 428 aa9.33□□□□□ -0.92
CAPN3-206ENST00000397163 RNASEH2AO75792 299 aaKnown RBP9.33□□□□□ -0.92
CAPN3-206ENST00000397163 UBA1P22314 1058 aaKnown RBP9.33□□□□□ -0.92
CAPN3-206ENST00000397163 PSMB4P28070 264 aa9.33□□□□□ -0.92
CAPN3-206ENST00000397163 PPARGP37231 505 aaPredicted RBP9.33□□□□□ -0.92
CAPN3-206ENST00000397163 SLC6A3Q01959 620 aa9.33□□□□□ -0.92
CAPN3-206ENST00000397163 MXD4Q14582 209 aaPredicted RBP9.33□□□□□ -0.92
CAPN3-206ENST00000397163 TMEM132BQ14DG7 1078 aa9.33□□□□□ -0.92
CAPN3-206ENST00000397163 BORAQ6PGQ7 559 aa9.33□□□□□ -0.92
CAPN3-206ENST00000397163 LCLAT1Q6UWP7 414 aa9.33□□□□□ -0.92
CAPN3-206ENST00000397163 SETD3Q86TU7 594 aaPredicted RBP9.33□□□□□ -0.92
CAPN3-206ENST00000397163 NLGN2Q8NFZ4 835 aa9.33□□□□□ -0.92
CAPN3-206ENST00000397163 ZNF669Q96BR6 464 aaPredicted RBP9.33□□□□□ -0.92
CAPN3-206ENST00000397163 DHRS1Q96LJ7 313 aa9.33□□□□□ -0.92
CAPN3-206ENST00000397163 KLHL32Q96NJ5 620 aa9.33□□□□□ -0.92
CAPN3-206ENST00000397163 CSPG4P5Q96PW8 444 aa9.33□□□□□ -0.92
CAPN3-206ENST00000397163 NT5C1AQ9BXI3 368 aa9.33□□□□□ -0.92
CAPN3-206ENST00000397163 B3GNT5Q9BYG0 378 aa9.33□□□□□ -0.92
CAPN3-206ENST00000397163 C2orf40Q9H1Z8 148 aa9.33□□□□□ -0.92
CAPN3-206ENST00000397163 EFCAB1Q9HAE3 211 aa9.33□□□□□ -0.92
CAPN3-206ENST00000397163 PLGRKTQ9HBL7 147 aa9.33□□□□□ -0.92
CAPN3-206ENST00000397163 NMRAL1Q9HBL8 299 aa9.33□□□□□ -0.92
CAPN3-206ENST00000397163 TRPC7Q9HCX4 862 aa9.33□□□□□ -0.92
CAPN3-206ENST00000397163 SLC38A7Q9NVC3 462 aa9.33□□□□□ -0.92
CAPN3-206ENST00000397163 ADA2Q9NZK5 511 aa9.33□□□□□ -0.92
CAPN3-206ENST00000397163 EPS15L1Q9UBC2 864 aa9.33□□□□□ -0.92
CAPN3-206ENST00000397163 PRSS51A0A1B0GVH4 220 aa9.33□□□□□ -0.92
CAPN3-206ENST00000397163 ARHGEF37A1IGU5 675 aa9.33□□□□□ -0.92
CAPN3-206ENST00000397163 RNF103O00237 685 aa9.33□□□□□ -0.92
CAPN3-206ENST00000397163 BCAS2O75934 225 aaPredicted RBP9.33□□□□□ -0.92
CAPN3-206ENST00000397163 PIGNO95427 931 aa9.33□□□□□ -0.92
CAPN3-206ENST00000397163 SAT1P21673 171 aa9.33□□□□□ -0.92
CAPN3-206ENST00000397163 CCR10P46092 362 aa9.33□□□□□ -0.92
CAPN3-206ENST00000397163 DPYSL2Q16555 572 aa9.33□□□□□ -0.92
CAPN3-206ENST00000397163 KRT80Q6KB66 452 aa9.33□□□□□ -0.92
CAPN3-206ENST00000397163 HACE1Q8IYU2 909 aa9.33□□□□□ -0.92
CAPN3-206ENST00000397163 CCNYQ8ND76 341 aa9.33□□□□□ -0.92
CAPN3-206ENST00000397163 CLIP3Q96DZ5 547 aa9.33□□□□□ -0.92
CAPN3-206ENST00000397163 COX4I2Q96KJ9 171 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms