RNA–Protein interactions for RNA: ENST00000397149.3

SMU1-201, Transcript of SMU1, DNA replication regulator and spliceosomal factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMU1, Length 7,122 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMU1-201ENST00000397149 INO80DQ53TQ3 878 aaPredicted RBP12.51□□□□□ -0.41
SMU1-201ENST00000397149 OGFRL1Q5TC84 451 aaPredicted RBP12.51□□□□□ -0.41
SMU1-201ENST00000397149 ARMC10Q8N2F6 343 aa12.51□□□□□ -0.41
SMU1-201ENST00000397149 PLEKHG4BQ96PX9 1271 aa12.51□□□□□ -0.41
SMU1-201ENST00000397149 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.51□□□□□ -0.41
SMU1-201ENST00000397149 ZNF224Q9NZL3 707 aa12.51□□□□□ -0.41
SMU1-201ENST00000397149 GULP1Q9UBP9 304 aa12.51□□□□□ -0.41
SMU1-201ENST00000397149 PFDN2Q9UHV9 154 aa12.51□□□□□ -0.41
SMU1-201ENST00000397149 MINPP1Q9UNW1 487 aa12.51□□□□□ -0.41
SMU1-201ENST00000397149 PCDHA11Q9Y5I1 949 aa12.51□□□□□ -0.41
SMU1-201ENST00000397149 CFAP65Q6ZU64 1925 aaKnown RBP12.51□□□□□ -0.41
SMU1-201ENST00000397149 ISM1B1AKI9 464 aa12.51□□□□□ -0.41
SMU1-201ENST00000397149 PGRMC2O15173 223 aa12.51□□□□□ -0.41
SMU1-201ENST00000397149 ALDH2P05091 517 aa12.51□□□□□ -0.41
SMU1-201ENST00000397149 MAGEA12P43365 314 aa12.51□□□□□ -0.41
SMU1-201ENST00000397149 CXorf57Q6NSI4 855 aaKnown RBP12.51□□□□□ -0.41
SMU1-201ENST00000397149 TRAPPC11Q7Z392 1133 aa12.51□□□□□ -0.41
SMU1-201ENST00000397149 TMEM8AQ9HCN3 771 aa12.51□□□□□ -0.41
SMU1-201ENST00000397149 PRMT7Q9NVM4 692 aaPredicted RBP12.51□□□□□ -0.41
SMU1-201ENST00000397149 MROH7-TTC4A0A0A0MT08 1334 aa12.51□□□□□ -0.41
SMU1-201ENST00000397149 NCAM2O15394 837 aa12.51□□□□□ -0.41
SMU1-201ENST00000397149 C9P02748 559 aa12.51□□□□□ -0.41
SMU1-201ENST00000397149 ANXA5P08758 320 aa12.51□□□□□ -0.41
SMU1-201ENST00000397149 PDHBP11177 359 aa12.51□□□□□ -0.41
SMU1-201ENST00000397149 UGT1A5P35504 534 aa12.51□□□□□ -0.41
SMU1-201ENST00000397149 TBX2Q13207 712 aaPredicted RBP12.51□□□□□ -0.41
SMU1-201ENST00000397149 DNASE1L3Q13609 305 aa12.51□□□□□ -0.41
SMU1-201ENST00000397149 MED22Q15528 200 aa12.51□□□□□ -0.41
SMU1-201ENST00000397149 SYNPOQ8N3V7 929 aa12.51□□□□□ -0.41
SMU1-201ENST00000397149 SUSD6Q92537 303 aa12.51□□□□□ -0.41
SMU1-201ENST00000397149 C1QTNF7Q9BXJ2 289 aa12.51□□□□□ -0.41
SMU1-201ENST00000397149 LMAN2LQ9H0V9 348 aa12.51□□□□□ -0.41
SMU1-201ENST00000397149 HACL1Q9UJ83 578 aa12.51□□□□□ -0.41
SMU1-201ENST00000397149 FFAR3O14843 346 aa12.5□□□□□ -0.41
SMU1-201ENST00000397149 GPR42O15529 346 aa12.5□□□□□ -0.41
SMU1-201ENST00000397149 OR10H3O60404 316 aa12.5□□□□□ -0.41
SMU1-201ENST00000397149 SEC24AO95486 1093 aa12.5□□□□□ -0.41
SMU1-201ENST00000397149 CYP4B1P13584 511 aa12.5□□□□□ -0.41
SMU1-201ENST00000397149 GNALP38405 381 aa12.5□□□□□ -0.41
SMU1-201ENST00000397149 CENPCQ03188 943 aa12.5□□□□□ -0.41
SMU1-201ENST00000397149 ACSM2AQ08AH3 577 aa12.5□□□□□ -0.41
SMU1-201ENST00000397149 CRY1Q16526 586 aa12.5□□□□□ -0.41
SMU1-201ENST00000397149 ACSM2BQ68CK6 577 aa12.5□□□□□ -0.41
SMU1-201ENST00000397149 SLC4A11Q8NBS3 891 aa12.5□□□□□ -0.41
SMU1-201ENST00000397149 CXorf40AQ8TE69 158 aa12.5□□□□□ -0.41
SMU1-201ENST00000397149 CEP295NLQ96MC4 621 aa12.5□□□□□ -0.41
SMU1-201ENST00000397149 APBA2Q99767 749 aa12.5□□□□□ -0.41
SMU1-201ENST00000397149 AIFM2Q9BRQ8 373 aa12.5□□□□□ -0.41
SMU1-201ENST00000397149 THAP2Q9H0W7 228 aa12.5□□□□□ -0.41
SMU1-201ENST00000397149 DCP1AQ9NPI6 582 aaPredicted RBP12.5□□□□□ -0.41
SMU1-201ENST00000397149 GPR108Q9NPR9 543 aa12.5□□□□□ -0.41
SMU1-201ENST00000397149 ENOPH1Q9UHY7 261 aa12.5□□□□□ -0.41
SMU1-201ENST00000397149 ABCA10Q8WWZ4 1543 aa12.5□□□□□ -0.41
SMU1-201ENST00000397149 THOC2Q8NI27 1593 aaKnown RBP12.5□□□□□ -0.41
SMU1-201ENST00000397149 TSPAN4O14817 238 aa12.5□□□□□ -0.41
SMU1-201ENST00000397149 INMTO95050 263 aa12.5□□□□□ -0.41
SMU1-201ENST00000397149 POLR2EP19388 210 aaKnown RBP12.5□□□□□ -0.41
SMU1-201ENST00000397149 PNPLA4P41247 253 aa12.5□□□□□ -0.41
SMU1-201ENST00000397149 ARFIP1P53367 373 aa12.5□□□□□ -0.41
SMU1-201ENST00000397149 CDC42P60953 191 aa12.5□□□□□ -0.41
SMU1-201ENST00000397149 GALNT3Q14435 633 aa12.5□□□□□ -0.41
SMU1-201ENST00000397149 CHERPQ8IWX8 916 aaKnown RBP12.5□□□□□ -0.41
SMU1-201ENST00000397149 TCAIMQ8N3R3 496 aa12.5□□□□□ -0.41
SMU1-201ENST00000397149 BRSK1Q8TDC3 778 aa12.5□□□□□ -0.41
SMU1-201ENST00000397149 SMPDL3BQ92485 455 aa12.5□□□□□ -0.41
SMU1-201ENST00000397149 LY9Q9HBG7 655 aa12.5□□□□□ -0.41
SMU1-201ENST00000397149 TCF7L2Q9NQB0 619 aa12.5□□□□□ -0.41
SMU1-201ENST00000397149 TMLHEQ9NVH6 421 aa12.5□□□□□ -0.41
SMU1-201ENST00000397149 GRIN2AQ12879 1464 aa12.5□□□□□ -0.41
SMU1-201ENST00000397149 SLC16A3O15427 465 aaKnown RBP12.5□□□□□ -0.41
SMU1-201ENST00000397149 SGPL1O95470 568 aa12.5□□□□□ -0.41
SMU1-201ENST00000397149 CALB2P22676 271 aa12.5□□□□□ -0.41
SMU1-201ENST00000397149 PFKPQ01813 784 aa12.5□□□□□ -0.41
SMU1-201ENST00000397149 EN1Q05925 392 aaPredicted RBP12.5□□□□□ -0.41
SMU1-201ENST00000397149 C4orf22Q6V702 233 aa12.5□□□□□ -0.41
SMU1-201ENST00000397149 ZNF579Q8NAF0 562 aaKnown RBP12.5□□□□□ -0.41
SMU1-201ENST00000397149 ENGASEQ8NFI3 743 aa12.5□□□□□ -0.41
SMU1-201ENST00000397149 DPF2Q92785 391 aa12.5□□□□□ -0.41
SMU1-201ENST00000397149 ZFP14Q9HCL3 533 aa12.5□□□□□ -0.41
SMU1-201ENST00000397149 EQTNQ9NQ60 294 aa12.5□□□□□ -0.41
SMU1-201ENST00000397149 PSME2Q9UL46 239 aa12.5□□□□□ -0.41
SMU1-201ENST00000397149 OTOL1A6NHN0 477 aaPredicted RBP12.5□□□□□ -0.41
SMU1-201ENST00000397149 MRASO14807 208 aa12.5□□□□□ -0.41
SMU1-201ENST00000397149 AKAP8O43823 692 aaKnown RBP12.5□□□□□ -0.41
SMU1-201ENST00000397149 ZNF7P17097 686 aaPredicted RBP12.5□□□□□ -0.41
SMU1-201ENST00000397149 CDC25CP30307 473 aa12.5□□□□□ -0.41
SMU1-201ENST00000397149 MASP1P48740 699 aa12.5□□□□□ -0.41
SMU1-201ENST00000397149 SPIBQ01892 262 aa12.5□□□□□ -0.41
SMU1-201ENST00000397149 MTA1Q13330 715 aa12.5□□□□□ -0.41
SMU1-201ENST00000397149 MSLNQ13421 630 aaPredicted RBP12.5□□□□□ -0.41
SMU1-201ENST00000397149 NR1D2Q14995 579 aa12.5□□□□□ -0.41
SMU1-201ENST00000397149 MARC1Q5VT66 337 aa12.5□□□□□ -0.41
SMU1-201ENST00000397149 CCNI2Q6ZMN8 369 aaPredicted RBP12.5□□□□□ -0.41
SMU1-201ENST00000397149 OAFQ86UD1 273 aa12.5□□□□□ -0.41
SMU1-201ENST00000397149 ITIH5Q86UX2 942 aa12.5□□□□□ -0.41
SMU1-201ENST00000397149 TTC29Q8NA56 475 aaPredicted RBP12.5□□□□□ -0.41
SMU1-201ENST00000397149 ZNF540Q8NDQ6 660 aa12.5□□□□□ -0.41
SMU1-201ENST00000397149 FERD3LQ96RJ6 166 aa12.5□□□□□ -0.41
SMU1-201ENST00000397149 PAFAH2Q99487 392 aa12.5□□□□□ -0.41
SMU1-201ENST00000397149 OPTCQ9UBM4 332 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms