RNA–Protein interactions for RNA: ENST00000397099.1

SEC13-204, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 4

Gene SEC13, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-204ENST00000397099 MCOLN2Q8IZK6 566 aa14.3□□□□□ -0.12
SEC13-204ENST00000397099 SH2D3CQ8N5H7 860 aa14.3□□□□□ -0.12
SEC13-204ENST00000397099 GANCQ8TET4 914 aa14.3□□□□□ -0.12
SEC13-204ENST00000397099 FAM172AQ8WUF8 416 aa14.3□□□□□ -0.12
SEC13-204ENST00000397099 PTPRN2Q92932 1015 aa14.3□□□□□ -0.12
SEC13-204ENST00000397099 SKA1Q96BD8 255 aa14.3□□□□□ -0.12
SEC13-204ENST00000397099 EIF3CQ99613 913 aaKnown RBP14.3□□□□□ -0.12
SEC13-204ENST00000397099 OMDQ99983 421 aa14.3□□□□□ -0.12
SEC13-204ENST00000397099 CBX8Q9HC52 389 aa14.3□□□□□ -0.12
SEC13-204ENST00000397099 MCF2LO15068 1137 aa14.29□□□□□ -0.12
SEC13-204ENST00000397099 BCAT2O15382 392 aaPredicted RBP14.29□□□□□ -0.12
SEC13-204ENST00000397099 OPHN1O60890 802 aa14.29□□□□□ -0.12
SEC13-204ENST00000397099 MYBL1P10243 752 aa14.29□□□□□ -0.12
SEC13-204ENST00000397099 RHOQP17081 205 aa14.29□□□□□ -0.12
SEC13-204ENST00000397099 PMLP29590 882 aa14.29□□□□□ -0.12
SEC13-204ENST00000397099 ACSL1P33121 698 aa14.29□□□□□ -0.12
SEC13-204ENST00000397099 AFF3P51826 1226 aaKnown RBP14.29□□□□□ -0.12
SEC13-204ENST00000397099 UBASH3AP57075 661 aa14.29□□□□□ -0.12
SEC13-204ENST00000397099 FANCCQ00597 558 aa14.29□□□□□ -0.12
SEC13-204ENST00000397099 DLG2Q15700 870 aa14.29□□□□□ -0.12
SEC13-204ENST00000397099 CDO1Q16878 200 aa14.29□□□□□ -0.12
SEC13-204ENST00000397099 ALFQ53S48 1182 aa14.29□□□□□ -0.12
SEC13-204ENST00000397099 EFHC2Q5JST6 749 aa14.29□□□□□ -0.12
SEC13-204ENST00000397099 WDR59Q6PJI9 974 aa14.29□□□□□ -0.12
SEC13-204ENST00000397099 SLFN11Q7Z7L1 901 aa14.29□□□□□ -0.12
SEC13-204ENST00000397099 FAM124AQ86V42 546 aa14.29□□□□□ -0.12
SEC13-204ENST00000397099 MMAAQ8IVH4 418 aaKnown RBP14.29□□□□□ -0.12
SEC13-204ENST00000397099 DEFB124Q8NES8 71 aa14.29□□□□□ -0.12
SEC13-204ENST00000397099 OR2T34Q8NGX1 318 aa14.29□□□□□ -0.12
SEC13-204ENST00000397099 JOSD2Q8TAC2 188 aa14.29□□□□□ -0.12
SEC13-204ENST00000397099 FRS2Q8WU20 508 aa14.29□□□□□ -0.12
SEC13-204ENST00000397099 NAP1L5Q96NT1 182 aaPredicted RBP14.29□□□□□ -0.12
SEC13-204ENST00000397099 FAM129BQ96TA1 746 aa14.29□□□□□ -0.12
SEC13-204ENST00000397099 SYT11Q9BT88 431 aa14.29□□□□□ -0.12
SEC13-204ENST00000397099 CEP44Q9C0F1 390 aa14.29□□□□□ -0.12
SEC13-204ENST00000397099 TTYH3Q9C0H2 523 aa14.29□□□□□ -0.12
SEC13-204ENST00000397099 SLC32A1Q9H598 525 aa14.29□□□□□ -0.12
SEC13-204ENST00000397099 ANLNQ9NQW6 1124 aa14.29□□□□□ -0.12
SEC13-204ENST00000397099 DNAAF2Q9NVR5 837 aaKnown RBP14.29□□□□□ -0.12
SEC13-204ENST00000397099 ZBTB32Q9Y2Y4 487 aaPredicted RBP14.29□□□□□ -0.12
SEC13-204ENST00000397099 PCDH15Q96QU1 1955 aa14.29□□□□□ -0.12
SEC13-204ENST00000397099 TCRBV5S1A1TA0A578 114 aa14.28□□□□□ -0.12
SEC13-204ENST00000397099 I6L893 689 aaPredicted RBP14.28□□□□□ -0.12
SEC13-204ENST00000397099 MID1O15344 667 aa14.28□□□□□ -0.12
SEC13-204ENST00000397099 RNASEH2AO75792 299 aaKnown RBP14.28□□□□□ -0.12
SEC13-204ENST00000397099 CNTN5O94779 1100 aa14.28□□□□□ -0.12
SEC13-204ENST00000397099 CER1O95813 267 aa14.28□□□□□ -0.12
SEC13-204ENST00000397099 IL1BP01584 269 aa14.28□□□□□ -0.12
SEC13-204ENST00000397099 PLEKP08567 350 aaPredicted RBP14.28□□□□□ -0.12
SEC13-204ENST00000397099 CEACAM1P13688 526 aa14.28□□□□□ -0.12
SEC13-204ENST00000397099 CD27P26842 260 aa14.28□□□□□ -0.12
SEC13-204ENST00000397099 L1CAMP32004 1257 aa14.28□□□□□ -0.12
SEC13-204ENST00000397099 RECQLP46063 649 aaPredicted RBP14.28□□□□□ -0.12
SEC13-204ENST00000397099 STK19P49842 368 aaPredicted RBP14.28□□□□□ -0.12
SEC13-204ENST00000397099 CCR5P51681 352 aa14.28□□□□□ -0.12
SEC13-204ENST00000397099 HDAC4P56524 1084 aa14.28□□□□□ -0.12
SEC13-204ENST00000397099 GNA12Q03113 381 aa14.28□□□□□ -0.12
SEC13-204ENST00000397099 C15orf59Q2T9L4 293 aaPredicted RBP14.28□□□□□ -0.12
SEC13-204ENST00000397099 ZSCAN23Q3MJ62 389 aa14.28□□□□□ -0.12
SEC13-204ENST00000397099 PPP1R15BQ5SWA1 713 aa14.28□□□□□ -0.12
SEC13-204ENST00000397099 MANEALQ5VSG8 457 aa14.28□□□□□ -0.12
SEC13-204ENST00000397099 TFAP2DQ7Z6R9 452 aa14.28□□□□□ -0.12
SEC13-204ENST00000397099 LUZP1Q86V48 1076 aa14.28□□□□□ -0.12
SEC13-204ENST00000397099 ATP11CQ8NB49 1132 aa14.28□□□□□ -0.12
SEC13-204ENST00000397099 CHD5Q8TDI0 1954 aa14.28□□□□□ -0.12
SEC13-204ENST00000397099 FNIP1Q8TF40 1166 aa14.28□□□□□ -0.12
SEC13-204ENST00000397099 TBC1D31Q96DN5 1066 aa14.28□□□□□ -0.12
SEC13-204ENST00000397099 MIR1-1HGQ9H1L0 117 aa14.28□□□□□ -0.12
SEC13-204ENST00000397099 MAGEH1Q9H213 219 aa14.28□□□□□ -0.12
SEC13-204ENST00000397099 MRPL47Q9HD33 250 aaKnown RBP14.28□□□□□ -0.12
SEC13-204ENST00000397099 TMEM248Q9NWD8 314 aa14.28□□□□□ -0.12
SEC13-204ENST00000397099 MPP6Q9NZW5 540 aa14.28□□□□□ -0.12
SEC13-204ENST00000397099 VPS51Q9UID3 782 aa14.28□□□□□ -0.12
SEC13-204ENST00000397099 HPCAL4Q9UM19 191 aa14.28□□□□□ -0.12
SEC13-204ENST00000397099 SCINQ9Y6U3 715 aa14.28□□□□□ -0.12
SEC13-204ENST00000397099 ASCC3Q8N3C0 2202 aaKnown RBP14.27□□□□□ -0.12
SEC13-204ENST00000397099 ZSCAN5CA6NGD5 496 aaPredicted RBP14.27□□□□□ -0.13
SEC13-204ENST00000397099 DFNA5O60443 496 aa14.27□□□□□ -0.13
SEC13-204ENST00000397099 RTN2O75298 545 aa14.27□□□□□ -0.13
SEC13-204ENST00000397099 PRNPP04156 253 aa14.27□□□□□ -0.13
SEC13-204ENST00000397099 ZNF883P0CG24 379 aa14.27□□□□□ -0.13
SEC13-204ENST00000397099 MAOBP27338 520 aa14.27□□□□□ -0.13
SEC13-204ENST00000397099 GGCXP38435 758 aa14.27□□□□□ -0.13
SEC13-204ENST00000397099 GRIA4P48058 902 aa14.27□□□□□ -0.13
SEC13-204ENST00000397099 PSMD8P48556 350 aa14.27□□□□□ -0.13
SEC13-204ENST00000397099 IRAK1P51617 712 aa14.27□□□□□ -0.13
SEC13-204ENST00000397099 ZNF135P52742 658 aaPredicted RBP14.27□□□□□ -0.13
SEC13-204ENST00000397099 FOXC1Q12948 553 aa14.27□□□□□ -0.13
SEC13-204ENST00000397099 ST3GAL2Q16842 350 aa14.27□□□□□ -0.13
SEC13-204ENST00000397099 KIAA0895LQ68EN5 471 aa14.27□□□□□ -0.13
SEC13-204ENST00000397099 PLEKHA7Q6IQ23 1121 aa14.27□□□□□ -0.13
SEC13-204ENST00000397099 RWDD4Q6NW29 188 aaKnown RBP14.27□□□□□ -0.13
SEC13-204ENST00000397099 PLPP6Q8IY26 295 aa14.27□□□□□ -0.13
SEC13-204ENST00000397099 STK40Q8N2I9 435 aa14.27□□□□□ -0.13
SEC13-204ENST00000397099 MINDY1Q8N5J2 469 aa14.27□□□□□ -0.13
SEC13-204ENST00000397099 PCDH20Q8N6Y1 951 aaKnown RBP14.27□□□□□ -0.13
SEC13-204ENST00000397099 TMIEQ8NEW7 156 aa14.27□□□□□ -0.13
SEC13-204ENST00000397099 FAM131CQ96AQ9 280 aa14.27□□□□□ -0.13
SEC13-204ENST00000397099 MCEEQ96PE7 176 aa14.27□□□□□ -0.13
SEC13-204ENST00000397099 EPAS1Q99814 870 aa14.27□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms