RNA–Protein interactions for RNA: ENST00000396861.5

GAPDH-205, Transcript of glyceraldehyde-3-phosphate dehydrogenase, humanhuman

APPRIS P1 TSL 5 BASIC

Gene GAPDH, Length 1,348 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Exosome, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPDH-205ENST00000396861 PCDHA13Q9Y5I0 950 aa13.21□□□□□ -0.29
GAPDH-205ENST00000396861 TTC34A8MYJ7 566 aa13.2□□□□□ -0.3
GAPDH-205ENST00000396861 EEF2KO00418 725 aaKnown RBP13.2□□□□□ -0.3
GAPDH-205ENST00000396861 SNAP91O60641 907 aa13.2□□□□□ -0.3
GAPDH-205ENST00000396861 GOT1P17174 413 aa13.2□□□□□ -0.3
GAPDH-205ENST00000396861 NDUFV2P19404 249 aa13.2□□□□□ -0.3
GAPDH-205ENST00000396861 GLDCP23378 1020 aa13.2□□□□□ -0.3
GAPDH-205ENST00000396861 HTR7P34969 479 aa13.2□□□□□ -0.3
GAPDH-205ENST00000396861 CNR2P34972 360 aa13.2□□□□□ -0.3
GAPDH-205ENST00000396861 VASPP50552 380 aaPredicted RBP13.2□□□□□ -0.3
GAPDH-205ENST00000396861 COPAP53621 1224 aa13.2□□□□□ -0.3
GAPDH-205ENST00000396861 TPI1P60174 286 aa13.2□□□□□ -0.3
GAPDH-205ENST00000396861 GNA12Q03113 381 aa13.2□□□□□ -0.3
GAPDH-205ENST00000396861 CAMK2GQ13555 558 aaPredicted RBP13.2□□□□□ -0.3
GAPDH-205ENST00000396861 STARD3Q14849 445 aa13.2□□□□□ -0.3
GAPDH-205ENST00000396861 TCEAL1Q15170 157 aa13.2□□□□□ -0.3
GAPDH-205ENST00000396861 SMTNL2Q2TAL5 461 aa13.2□□□□□ -0.3
GAPDH-205ENST00000396861 ZNF783Q6ZMS7 281 aa13.2□□□□□ -0.3
GAPDH-205ENST00000396861 PGBD3Q8N328 593 aa13.2□□□□□ -0.3
GAPDH-205ENST00000396861 SUMF1Q8NBK3 374 aa13.2□□□□□ -0.3
GAPDH-205ENST00000396861 RFFLQ8WZ73 363 aa13.2□□□□□ -0.3
GAPDH-205ENST00000396861 BAG1Q99933 345 aaPredicted RBP13.2□□□□□ -0.3
GAPDH-205ENST00000396861 MKRN2Q9H000 416 aaKnown RBP13.2□□□□□ -0.3
GAPDH-205ENST00000396861 NOL6Q9H6R4 1146 aaKnown RBP13.2□□□□□ -0.3
GAPDH-205ENST00000396861 PRSS16Q9NQE7 514 aa13.2□□□□□ -0.3
GAPDH-205ENST00000396861 BCCIPQ9P287 314 aaKnown RBP eCLIP13.2□□□□□ -0.3
GAPDH-205ENST00000396861 VPS51Q9UID3 782 aa13.2□□□□□ -0.3
GAPDH-205ENST00000396861 NUMA1Q14980 2115 aa13.2□□□□□ -0.3
GAPDH-205ENST00000396861 SHROOM3Q8TF72 1996 aa13.19□□□□□ -0.3
GAPDH-205ENST00000396861 TMEM110-MUSTN1A8MSY1 372 aa13.19□□□□□ -0.3
GAPDH-205ENST00000396861 SYNCRIPO60506 623 aaKnown RBP13.19□□□□□ -0.3
GAPDH-205ENST00000396861 ZMPSTE24O75844 475 aa13.19□□□□□ -0.3
GAPDH-205ENST00000396861 ACVRL1P37023 503 aa13.19□□□□□ -0.3
GAPDH-205ENST00000396861 TAS2R40P59535 323 aa13.19□□□□□ -0.3
GAPDH-205ENST00000396861 KRT83P78385 493 aa13.19□□□□□ -0.3
GAPDH-205ENST00000396861 MESDQ14696 234 aa13.19□□□□□ -0.3
GAPDH-205ENST00000396861 SPA17Q15506 151 aa13.19□□□□□ -0.3
GAPDH-205ENST00000396861 DPYSL2Q16555 572 aa13.19□□□□□ -0.3
GAPDH-205ENST00000396861 HNRNPA1L2Q32P51 320 aaKnown RBP13.19□□□□□ -0.3
GAPDH-205ENST00000396861 ATP13A4Q4VNC1 1196 aa13.19□□□□□ -0.3
GAPDH-205ENST00000396861 PPP6R3Q5H9R7 873 aaPredicted RBP13.19□□□□□ -0.3
GAPDH-205ENST00000396861 RTL3Q8N8U3 475 aaKnown RBP13.19□□□□□ -0.3
GAPDH-205ENST00000396861 DCAF4L2Q8NA75 395 aa13.19□□□□□ -0.3
GAPDH-205ENST00000396861 TEKT4Q8WW24 435 aa13.19□□□□□ -0.3
GAPDH-205ENST00000396861 GAB3Q8WWW8 586 aa13.19□□□□□ -0.3
GAPDH-205ENST00000396861 HSPH1Q92598 858 aa13.19□□□□□ -0.3
GAPDH-205ENST00000396861 PTPRN2Q92932 1015 aa13.19□□□□□ -0.3
GAPDH-205ENST00000396861 ARHGEF2Q92974 986 aaKnown RBP13.19□□□□□ -0.3
GAPDH-205ENST00000396861 MRGPRX1Q96LB2 322 aa13.19□□□□□ -0.3
GAPDH-205ENST00000396861 SPON2Q9BUD6 331 aa13.19□□□□□ -0.3
GAPDH-205ENST00000396861 C2orf49Q9BVC5 232 aaPredicted RBP13.19□□□□□ -0.3
GAPDH-205ENST00000396861 ACE2Q9BYF1 805 aaPredicted RBP13.19□□□□□ -0.3
GAPDH-205ENST00000396861 EPC1Q9H2F5 836 aa13.19□□□□□ -0.3
GAPDH-205ENST00000396861 CATSPERBQ9H7T0 1116 aa13.19□□□□□ -0.3
GAPDH-205ENST00000396861 CWC15Q9P013 229 aaKnown RBP13.19□□□□□ -0.3
GAPDH-205ENST00000396861 LCMT1Q9UIC8 334 aa13.19□□□□□ -0.3
GAPDH-205ENST00000396861 SLC25A13Q9UJS0 675 aa13.19□□□□□ -0.3
GAPDH-205ENST00000396861 INVSQ9Y283 1065 aa13.19□□□□□ -0.3
GAPDH-205ENST00000396861 REXO2Q9Y3B8 237 aaKnown RBP13.19□□□□□ -0.3
GAPDH-205ENST00000396861 TNRC6BQ9UPQ9 1833 aaKnown RBP13.19□□□□□ -0.3
GAPDH-205ENST00000396861 RCCD1A6NED2 376 aa13.18□□□□□ -0.3
GAPDH-205ENST00000396861 DCLK1O15075 740 aa13.18□□□□□ -0.3
GAPDH-205ENST00000396861 FGF10O15520 208 aaPredicted RBP13.18□□□□□ -0.3
GAPDH-205ENST00000396861 SIN3BO75182 1162 aa13.18□□□□□ -0.3
GAPDH-205ENST00000396861 RPP40O75818 363 aaKnown RBP13.18□□□□□ -0.3
GAPDH-205ENST00000396861 MT-CO1P00395 513 aa13.18□□□□□ -0.3
GAPDH-205ENST00000396861 SRCP12931 536 aa13.18□□□□□ -0.3
GAPDH-205ENST00000396861 ERCC2P18074 760 aa13.18□□□□□ -0.3
GAPDH-205ENST00000396861 MAN1A1P33908 653 aa13.18□□□□□ -0.3
GAPDH-205ENST00000396861 NNMTP40261 264 aa13.18□□□□□ -0.3
GAPDH-205ENST00000396861 ARHGAP25P42331 645 aa13.18□□□□□ -0.3
GAPDH-205ENST00000396861 SSR1P43307 286 aaKnown RBP13.18□□□□□ -0.3
GAPDH-205ENST00000396861 HCAR3P49019 387 aa13.18□□□□□ -0.3
GAPDH-205ENST00000396861 HADHQ16836 314 aaKnown RBP13.18□□□□□ -0.3
GAPDH-205ENST00000396861 C9orf64Q5T6V5 341 aa13.18□□□□□ -0.3
GAPDH-205ENST00000396861 RFX8Q6ZV50 586 aa13.18□□□□□ -0.3
GAPDH-205ENST00000396861 POLNQ7Z5Q5 900 aa13.18□□□□□ -0.3
GAPDH-205ENST00000396861 TMPRSS6Q8IU80 811 aa13.18□□□□□ -0.3
GAPDH-205ENST00000396861 LRRC8AQ8IWT6 810 aa13.18□□□□□ -0.3
GAPDH-205ENST00000396861 SH2D3CQ8N5H7 860 aa13.18□□□□□ -0.3
GAPDH-205ENST00000396861 FRMD1Q8N878 549 aa13.18□□□□□ -0.3
GAPDH-205ENST00000396861 ACRBPQ8NEB7 543 aa13.18□□□□□ -0.3
GAPDH-205ENST00000396861 OR2T3Q8NH03 318 aa13.18□□□□□ -0.3
GAPDH-205ENST00000396861 FRS2Q8WU20 508 aa13.18□□□□□ -0.3
GAPDH-205ENST00000396861 RLN3Q8WXF3 142 aa13.18□□□□□ -0.3
GAPDH-205ENST00000396861 MAGEH1Q9H213 219 aa13.18□□□□□ -0.3
GAPDH-205ENST00000396861 PRDM16Q9HAZ2 1276 aa13.18□□□□□ -0.3
GAPDH-205ENST00000396861 PCDH18Q9HCL0 1135 aa13.18□□□□□ -0.3
GAPDH-205ENST00000396861 ATP13A1Q9HD20 1204 aa13.18□□□□□ -0.3
GAPDH-205ENST00000396861 CD93Q9NPY3 652 aa13.18□□□□□ -0.3
GAPDH-205ENST00000396861 STAU2Q9NUL3 570 aaKnown RBP eCLIP13.18□□□□□ -0.3
GAPDH-205ENST00000396861 HS3ST2Q9Y278 367 aa13.18□□□□□ -0.3
GAPDH-205ENST00000396861 EDDM13A0A1B0GTR0 161 aa13.17□□□□□ -0.3
GAPDH-205ENST00000396861 TARSL2A2RTX5 802 aaKnown RBP13.17□□□□□ -0.3
GAPDH-205ENST00000396861 CBX4O00257 560 aa13.17□□□□□ -0.3
GAPDH-205ENST00000396861 DAPK3O43293 454 aa13.17□□□□□ -0.3
GAPDH-205ENST00000396861 SMAD6O43541 496 aaKnown RBP13.17□□□□□ -0.3
GAPDH-205ENST00000396861 ATP9BO43861 1147 aa13.17□□□□□ -0.3
GAPDH-205ENST00000396861 RAMP2O60895 175 aa13.17□□□□□ -0.3
GAPDH-205ENST00000396861 CD160O95971 181 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms