RNA–Protein interactions for RNA: ENST00000396366.6

FXN-203, Transcript of frataxin, humanhuman

TSL 2 BASIC

Gene FXN, Length 922 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXN-203ENST00000396366 RDXP35241 583 aaKnown RBP18.78■□□□□ 0.6
FXN-203ENST00000396366 STAT1P42224 750 aa18.78■□□□□ 0.6
FXN-203ENST00000396366 GRIA4P48058 902 aa18.78■□□□□ 0.6
FXN-203ENST00000396366 VASPP50552 380 aaPredicted RBP18.78■□□□□ 0.6
FXN-203ENST00000396366 ADPRHP54922 357 aa18.78■□□□□ 0.6
FXN-203ENST00000396366 TEAD4Q15561 434 aa18.78■□□□□ 0.6
FXN-203ENST00000396366 C15orf59Q2T9L4 293 aaPredicted RBP18.78■□□□□ 0.6
FXN-203ENST00000396366 CCDC14Q49A88 953 aa18.78■□□□□ 0.6
FXN-203ENST00000396366 LINGO4Q6UY18 593 aa18.78■□□□□ 0.6
FXN-203ENST00000396366 CHCHD4Q8N4Q1 142 aa18.78■□□□□ 0.6
FXN-203ENST00000396366 SH2D3CQ8N5H7 860 aa18.78■□□□□ 0.6
FXN-203ENST00000396366 PNPLA1Q8N8W4 532 aa18.78■□□□□ 0.6
FXN-203ENST00000396366 MSANTD4Q8NCY6 345 aa18.78■□□□□ 0.6
FXN-203ENST00000396366 RXFP2Q8WXD0 754 aa18.78■□□□□ 0.6
FXN-203ENST00000396366 SPAG5Q96R06 1193 aa18.78■□□□□ 0.6
FXN-203ENST00000396366 PPP1R9BQ96SB3 815 aa18.78■□□□□ 0.6
FXN-203ENST00000396366 PCOLCE2Q9UKZ9 415 aa18.78■□□□□ 0.6
FXN-203ENST00000396366 PPM1HQ9ULR3 514 aa18.78■□□□□ 0.6
FXN-203ENST00000396366 PCDHB9Q9Y5E1 797 aa18.78■□□□□ 0.6
FXN-203ENST00000396366 DOCK4Q8N1I0 1966 aa18.78■□□□□ 0.6
FXN-203ENST00000396366 CABIN1Q9Y6J0 2220 aa18.77■□□□□ 0.6
FXN-203ENST00000396366 WDFY3Q8IZQ1 3526 aa18.77■□□□□ 0.6
FXN-203ENST00000396366 DOCK9Q9BZ29 2069 aa18.77■□□□□ 0.6
FXN-203ENST00000396366 IGLV3-10A0A075B6K4 115 aa18.77■□□□□ 0.6
FXN-203ENST00000396366 TBC1D3DA0A087WVF3 549 aa18.77■□□□□ 0.6
FXN-203ENST00000396366 TBC1D3IA0A087WXS9 549 aa18.77■□□□□ 0.6
FXN-203ENST00000396366 TBC1D3EA0A087X179 549 aa18.77■□□□□ 0.6
FXN-203ENST00000396366 TBC1D3KA0A087X1G2 549 aa18.77■□□□□ 0.6
FXN-203ENST00000396366 TBC1D3FA6NER0 549 aaPredicted RBP18.77■□□□□ 0.6
FXN-203ENST00000396366 LRRC10BA6NIK2 292 aa18.77■□□□□ 0.6
FXN-203ENST00000396366 LGALS16A8MUM7 142 aa18.77■□□□□ 0.6
FXN-203ENST00000396366 TBC1D3LB9A6J9 549 aa18.77■□□□□ 0.6
FXN-203ENST00000396366 H0Y8X5 98 aa18.77■□□□□ 0.6
FXN-203ENST00000396366 RNF103O00237 685 aa18.77■□□□□ 0.6
FXN-203ENST00000396366 SMAD6O43541 496 aaKnown RBP18.77■□□□□ 0.6
FXN-203ENST00000396366 ENDOD1O94919 500 aa18.77■□□□□ 0.6
FXN-203ENST00000396366 WNT1P04628 370 aa18.77■□□□□ 0.6
FXN-203ENST00000396366 TBC1D3HP0C7X1 549 aa18.77■□□□□ 0.6
FXN-203ENST00000396366 ZNF883P0CG24 379 aa18.77■□□□□ 0.6
FXN-203ENST00000396366 UNGP13051 313 aaPredicted RBP18.77■□□□□ 0.6
FXN-203ENST00000396366 ATP1A3P13637 1013 aa18.77■□□□□ 0.6
FXN-203ENST00000396366 CDK11BP21127 795 aaKnown RBP18.77■□□□□ 0.6
FXN-203ENST00000396366 PPP2CBP62714 309 aa18.77■□□□□ 0.6
FXN-203ENST00000396366 PPP2CAP67775 309 aa18.77■□□□□ 0.6
FXN-203ENST00000396366 UBXN1Q04323 297 aa18.77■□□□□ 0.6
FXN-203ENST00000396366 SFSWAPQ12872 951 aaKnown RBP18.77■□□□□ 0.6
FXN-203ENST00000396366 PTP4A2Q12974 167 aa18.77■□□□□ 0.6
FXN-203ENST00000396366 CDO1Q16878 200 aa18.77■□□□□ 0.6
FXN-203ENST00000396366 TBC1D3GQ6DHY5 549 aa18.77■□□□□ 0.6
FXN-203ENST00000396366 TBC1D3CQ6IPX1 549 aa18.77■□□□□ 0.6
FXN-203ENST00000396366 LRSAM1Q6UWE0 723 aa18.77■□□□□ 0.6
FXN-203ENST00000396366 LRRC31Q6UY01 552 aa18.77■□□□□ 0.6
FXN-203ENST00000396366 TBC1D3Q8IZP1 549 aaPredicted RBP18.77■□□□□ 0.6
FXN-203ENST00000396366 NEK11Q8NG66 645 aa18.77■□□□□ 0.6
FXN-203ENST00000396366 OR7D4Q8NG98 312 aa18.77■□□□□ 0.6
FXN-203ENST00000396366 OR8D1Q8WZ84 308 aa18.77■□□□□ 0.6
FXN-203ENST00000396366 TMEM121BQ9BXQ6 578 aaPredicted RBP18.77■□□□□ 0.6
FXN-203ENST00000396366 ZNF212Q9UDV6 495 aa18.77■□□□□ 0.6
FXN-203ENST00000396366 VPS51Q9UID3 782 aa18.77■□□□□ 0.6
FXN-203ENST00000396366 BTBD3Q9Y2F9 522 aa18.77■□□□□ 0.6
FXN-203ENST00000396366 PAXBP1Q9Y5B6 917 aa18.77■□□□□ 0.6
FXN-203ENST00000396366 TP53BP1Q12888 1972 aaPredicted RBP18.77■□□□□ 0.59
FXN-203ENST00000396366 GOLGA6L22H0YM25 854 aa18.76■□□□□ 0.59
FXN-203ENST00000396366 MCF2LO15068 1137 aa18.76■□□□□ 0.59
FXN-203ENST00000396366 RRM1P23921 792 aa18.76■□□□□ 0.59
FXN-203ENST00000396366 OR1E1P30953 314 aa18.76■□□□□ 0.59
FXN-203ENST00000396366 CTSKP43235 329 aa18.76■□□□□ 0.59
FXN-203ENST00000396366 RACK1P63244 317 aaKnown RBP18.76■□□□□ 0.59
FXN-203ENST00000396366 IL9RQ01113 521 aa18.76■□□□□ 0.59
FXN-203ENST00000396366 CNTN1Q12860 1018 aa18.76■□□□□ 0.59
FXN-203ENST00000396366 HNRNPDQ14103 355 aaKnown RBP18.76■□□□□ 0.59
FXN-203ENST00000396366 CCDC183Q5T5S1 534 aa18.76■□□□□ 0.59
FXN-203ENST00000396366 UNQ6494/PRO21346Q6UXR6 183 aa18.76■□□□□ 0.59
FXN-203ENST00000396366 DBX2Q6ZNG2 339 aa18.76■□□□□ 0.59
FXN-203ENST00000396366 ARCQ7LC44 396 aa18.76■□□□□ 0.59
FXN-203ENST00000396366 ADAT2Q7Z6V5 191 aaKnown RBP18.76■□□□□ 0.59
FXN-203ENST00000396366 SETD3Q86TU7 594 aaPredicted RBP18.76■□□□□ 0.59
FXN-203ENST00000396366 SLCO6A1Q86UG4 719 aa18.76■□□□□ 0.59
FXN-203ENST00000396366 ATP11CQ8NB49 1132 aa18.76■□□□□ 0.59
FXN-203ENST00000396366 PIP4K2CQ8TBX8 421 aa18.76■□□□□ 0.59
FXN-203ENST00000396366 HAPLN3Q96S86 360 aa18.76■□□□□ 0.59
FXN-203ENST00000396366 TMEM63CQ9P1W3 806 aa18.76■□□□□ 0.59
FXN-203ENST00000396366 HS3ST2Q9Y278 367 aa18.76■□□□□ 0.59
FXN-203ENST00000396366 IGF2RP11717 2491 aa18.76■□□□□ 0.59
FXN-203ENST00000396366 PROS1P07225 676 aa18.75■□□□□ 0.59
FXN-203ENST00000396366 CTSLP07711 333 aa18.75■□□□□ 0.59
FXN-203ENST00000396366 FTH1P19P0C7X4 201 aa18.75■□□□□ 0.59
FXN-203ENST00000396366 MAT2AP31153 395 aaKnown RBP18.75■□□□□ 0.59
FXN-203ENST00000396366 CCR5P51681 352 aa18.75■□□□□ 0.59
FXN-203ENST00000396366 KRT83P78385 493 aa18.75■□□□□ 0.59
FXN-203ENST00000396366 TYRO3Q06418 890 aa18.75■□□□□ 0.59
FXN-203ENST00000396366 CLEC16AQ2KHT3 1053 aa18.75■□□□□ 0.59
FXN-203ENST00000396366 AOPEPQ8N6M6 819 aa18.75■□□□□ 0.59
FXN-203ENST00000396366 OR2A12Q8NGT7 310 aa18.75■□□□□ 0.59
FXN-203ENST00000396366 RHBDD1Q8TEB9 315 aa18.75■□□□□ 0.59
FXN-203ENST00000396366 FAM131CQ96AQ9 280 aa18.75■□□□□ 0.59
FXN-203ENST00000396366 SPON2Q9BUD6 331 aa18.75■□□□□ 0.59
FXN-203ENST00000396366 AASDHPPTQ9NRN7 309 aa18.75■□□□□ 0.59
FXN-203ENST00000396366 ACTL7AQ9Y615 435 aa18.75■□□□□ 0.59
FXN-203ENST00000396366 C2CD4BA6NLJ0 364 aa18.74■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms