RNA–Protein interactions for RNA: ENST00000396033.6

ITGB1-202, Transcript of integrin subunit beta 1, humanhuman

APPRIS P2 TSL 5 BASIC

Gene ITGB1, Length 3,784 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-202ENST00000396033 PACS1Q6VY07 963 aa12.39□□□□□ -0.43
ITGB1-202ENST00000396033 FBXO22Q8NEZ5 403 aa12.39□□□□□ -0.43
ITGB1-202ENST00000396033 CERS2Q96G23 380 aa12.39□□□□□ -0.43
ITGB1-202ENST00000396033 OXCT2Q9BYC2 517 aaPredicted RBP12.39□□□□□ -0.43
ITGB1-202ENST00000396033 SLC13A1Q9BZW2 595 aa12.39□□□□□ -0.43
ITGB1-202ENST00000396033 VPS11Q9H270 941 aa12.39□□□□□ -0.43
ITGB1-202ENST00000396033 ABCF3Q9NUQ8 709 aa12.39□□□□□ -0.43
ITGB1-202ENST00000396033 KLHL14Q9P2G3 628 aa12.39□□□□□ -0.43
ITGB1-202ENST00000396033 SLC12A8A0AV02 714 aa12.39□□□□□ -0.43
ITGB1-202ENST00000396033 HMX2A2RU54 273 aa12.39□□□□□ -0.43
ITGB1-202ENST00000396033 ERVK-10P10266 1014 aa12.39□□□□□ -0.43
ITGB1-202ENST00000396033 PAPOLAP51003 745 aaKnown RBP12.39□□□□□ -0.43
ITGB1-202ENST00000396033 CERCAMQ5T4B2 595 aa12.39□□□□□ -0.43
ITGB1-202ENST00000396033 CDHR3Q6ZTQ4 885 aa12.39□□□□□ -0.43
ITGB1-202ENST00000396033 THOC1Q96FV9 657 aaKnown RBP12.39□□□□□ -0.43
ITGB1-202ENST00000396033 FCRL3Q96P31 734 aaPredicted RBP12.39□□□□□ -0.43
ITGB1-202ENST00000396033 PLCD4Q9BRC7 762 aa12.39□□□□□ -0.43
ITGB1-202ENST00000396033 ACTR5Q9H9F9 607 aaPredicted RBP12.39□□□□□ -0.43
ITGB1-202ENST00000396033 TXNDC16Q9P2K2 825 aa12.39□□□□□ -0.43
ITGB1-202ENST00000396033 GGT7Q9UJ14 662 aa12.39□□□□□ -0.43
ITGB1-202ENST00000396033 PSMD3O43242 534 aa12.38□□□□□ -0.43
ITGB1-202ENST00000396033 NEFHP12036 1026 aa12.38□□□□□ -0.43
ITGB1-202ENST00000396033 ETV4P43268 484 aa12.38□□□□□ -0.43
ITGB1-202ENST00000396033 AFMIDQ63HM1 303 aa12.38□□□□□ -0.43
ITGB1-202ENST00000396033 SERBP1Q8NC51 408 aaKnown RBP eCLIP12.38□□□□□ -0.43
ITGB1-202ENST00000396033 SPATA22Q8NHS9 363 aa12.38□□□□□ -0.43
ITGB1-202ENST00000396033 ZNF419Q96HQ0 510 aaPredicted RBP12.38□□□□□ -0.43
ITGB1-202ENST00000396033 BTN2A3PQ96KV6 586 aa12.38□□□□□ -0.43
ITGB1-202ENST00000396033 IL12RB2Q99665 862 aa12.38□□□□□ -0.43
ITGB1-202ENST00000396033 ZYG11BQ9C0D3 744 aa12.38□□□□□ -0.43
ITGB1-202ENST00000396033 AAR2Q9Y312 384 aaKnown RBP12.38□□□□□ -0.43
ITGB1-202ENST00000396033 SLC38A8A6NNN8 435 aa12.38□□□□□ -0.43
ITGB1-202ENST00000396033 WASH4PA8MWX3 477 aa12.38□□□□□ -0.43
ITGB1-202ENST00000396033 ADAM12O43184 909 aa12.38□□□□□ -0.43
ITGB1-202ENST00000396033 DHRS4L1P0CG22 281 aa12.38□□□□□ -0.43
ITGB1-202ENST00000396033 RPL17P18621 184 aaKnown RBP12.38□□□□□ -0.43
ITGB1-202ENST00000396033 CDH17Q12864 832 aa12.38□□□□□ -0.43
ITGB1-202ENST00000396033 LACTB2Q53H82 288 aaPredicted RBP12.38□□□□□ -0.43
ITGB1-202ENST00000396033 MANSC1Q9H8J5 431 aa12.38□□□□□ -0.43
ITGB1-202ENST00000396033 GLOD4Q9HC38 313 aa12.38□□□□□ -0.43
ITGB1-202ENST00000396033 COMMD8Q9NX08 183 aa12.38□□□□□ -0.43
ITGB1-202ENST00000396033 PRKAG3Q9UGI9 489 aa12.38□□□□□ -0.43
ITGB1-202ENST00000396033 PSAT1Q9Y617 370 aa12.38□□□□□ -0.43
ITGB1-202ENST00000396033 MICAL3Q7RTP6 2002 aa12.38□□□□□ -0.43
ITGB1-202ENST00000396033 USP1O94782 785 aa12.38□□□□□ -0.43
ITGB1-202ENST00000396033 RHOQP17081 205 aa12.38□□□□□ -0.43
ITGB1-202ENST00000396033 TPH1P17752 444 aa12.38□□□□□ -0.43
ITGB1-202ENST00000396033 ATF6P18850 670 aa12.38□□□□□ -0.43
ITGB1-202ENST00000396033 NPY2RP49146 381 aa12.38□□□□□ -0.43
ITGB1-202ENST00000396033 USP41Q3LFD5 358 aa12.38□□□□□ -0.43
ITGB1-202ENST00000396033 RAP1GAP2Q684P5 730 aa12.38□□□□□ -0.43
ITGB1-202ENST00000396033 LINC00523Q86TU6 105 aa12.38□□□□□ -0.43
ITGB1-202ENST00000396033 NDUFAF2Q8N183 169 aa12.38□□□□□ -0.43
ITGB1-202ENST00000396033 IL22Q9GZX6 179 aa12.38□□□□□ -0.43
ITGB1-202ENST00000396033 CCSER2Q9H7U1 834 aa12.38□□□□□ -0.43
ITGB1-202ENST00000396033 PRDM5Q9NQX1 630 aaPredicted RBP12.38□□□□□ -0.43
ITGB1-202ENST00000396033 RBM22Q9NW64 420 aaKnown RBP eCLIP12.38□□□□□ -0.433e-6■■■■■ 30.7
ITGB1-202ENST00000396033 MKS1Q9NXB0 559 aa12.38□□□□□ -0.43
ITGB1-202ENST00000396033 FNIP2Q9P278 1114 aa12.38□□□□□ -0.43
ITGB1-202ENST00000396033 IPO11Q9UI26 975 aaKnown RBP12.38□□□□□ -0.43
ITGB1-202ENST00000396033 NYNRINQ9P2P1 1898 aaKnown RBP12.37□□□□□ -0.43
ITGB1-202ENST00000396033 C2CD2LO14523 706 aa12.37□□□□□ -0.43
ITGB1-202ENST00000396033 CACNG3O60359 315 aa12.37□□□□□ -0.43
ITGB1-202ENST00000396033 TLR5O60602 858 aa12.37□□□□□ -0.43
ITGB1-202ENST00000396033 ANXA9O76027 345 aa12.37□□□□□ -0.43
ITGB1-202ENST00000396033 MT-CYBP00156 380 aaPredicted RBP12.37□□□□□ -0.43
ITGB1-202ENST00000396033 HLA-DQB2P05538 268 aa12.37□□□□□ -0.43
ITGB1-202ENST00000396033 CCNHP51946 323 aaPredicted RBP12.37□□□□□ -0.43
ITGB1-202ENST00000396033 CHSY1Q86X52 802 aa12.37□□□□□ -0.43
ITGB1-202ENST00000396033 LRRC49Q8IUZ0 686 aa12.37□□□□□ -0.43
ITGB1-202ENST00000396033 ZNF683Q8IZ20 524 aa12.37□□□□□ -0.43
ITGB1-202ENST00000396033 ZNF276Q8N554 614 aa12.37□□□□□ -0.43
ITGB1-202ENST00000396033 IPMKQ8NFU5 416 aa12.37□□□□□ -0.43
ITGB1-202ENST00000396033 FCRL5Q96RD9 977 aa12.37□□□□□ -0.43
ITGB1-202ENST00000396033 TBL1YQ9BQ87 522 aa12.37□□□□□ -0.43
ITGB1-202ENST00000396033 BEGAINQ9BUH8 593 aa12.37□□□□□ -0.43
ITGB1-202ENST00000396033 SLC24A3Q9HC58 644 aa12.37□□□□□ -0.43
ITGB1-202ENST00000396033 MTRRQ9UBK8 725 aa12.37□□□□□ -0.43
ITGB1-202ENST00000396033 PLLPQ9Y342 182 aa12.37□□□□□ -0.43
ITGB1-202ENST00000396033 AP3B1O00203 1094 aa12.37□□□□□ -0.43
ITGB1-202ENST00000396033 CNTN5O94779 1100 aa12.37□□□□□ -0.43
ITGB1-202ENST00000396033 SCTRP47872 440 aa12.37□□□□□ -0.43
ITGB1-202ENST00000396033 SERPINB4P48594 390 aa12.37□□□□□ -0.43
ITGB1-202ENST00000396033 IKBKEQ14164 716 aa12.37□□□□□ -0.43
ITGB1-202ENST00000396033 ANO4Q32M45 955 aa12.37□□□□□ -0.43
ITGB1-202ENST00000396033 C11orf91Q3C1V1 193 aa12.37□□□□□ -0.43
ITGB1-202ENST00000396033 ANKRD20A4Q4UJ75 823 aa12.37□□□□□ -0.43
ITGB1-202ENST00000396033 ALFQ53S48 1182 aa12.37□□□□□ -0.43
ITGB1-202ENST00000396033 SPOUT1Q5T280 376 aaKnown RBP12.37□□□□□ -0.43
ITGB1-202ENST00000396033 NAIF1Q69YI7 327 aaPredicted RBP12.37□□□□□ -0.43
ITGB1-202ENST00000396033 KIAA1841Q6NSI8 718 aa12.37□□□□□ -0.43
ITGB1-202ENST00000396033 TIFABQ6ZNK6 161 aa12.37□□□□□ -0.43
ITGB1-202ENST00000396033 OTOAQ7RTW8 1153 aa12.37□□□□□ -0.43
ITGB1-202ENST00000396033 TMEM135Q86UB9 458 aa12.37□□□□□ -0.43
ITGB1-202ENST00000396033 RMDN2Q96LZ7 410 aa12.37□□□□□ -0.43
ITGB1-202ENST00000396033 NOL6Q9H6R4 1146 aaKnown RBP12.37□□□□□ -0.43
ITGB1-202ENST00000396033 TMEM248Q9NWD8 314 aa12.37□□□□□ -0.43
ITGB1-202ENST00000396033 PPARGC1AQ9UBK2 798 aaKnown RBP12.37□□□□□ -0.43
ITGB1-202ENST00000396033 H0YHG0 523 aa12.37□□□□□ -0.43
ITGB1-202ENST00000396033 OR1D2P34982 312 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms