RNA–Protein interactions for RNA: ENST00000395898.3

VPS13C-204, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13C, Length 11,012 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-204ENST00000395898 HOXB6P17509 224 aaKnown RBP5.54□□□□□ -1.52
VPS13C-204ENST00000395898 RPL9P32969 192 aaKnown RBP5.54□□□□□ -1.52
VPS13C-204ENST00000395898 INAQ16352 499 aa5.54□□□□□ -1.52
VPS13C-204ENST00000395898 PCID2Q5JVF3 399 aa5.54□□□□□ -1.52
VPS13C-204ENST00000395898 FOXR2Q6PJQ5 311 aa5.54□□□□□ -1.52
VPS13C-204ENST00000395898 CCDC33Q8N5R6 958 aa5.54□□□□□ -1.52
VPS13C-204ENST00000395898 ATL1Q8WXF7 558 aa5.54□□□□□ -1.52
VPS13C-204ENST00000395898 PCDHGA4Q9Y5G9 962 aa5.54□□□□□ -1.52
VPS13C-204ENST00000395898 ZSCAN5CA6NGD5 496 aaPredicted RBP5.54□□□□□ -1.52
VPS13C-204ENST00000395898 WBP4O75554 376 aaKnown RBP5.54□□□□□ -1.52
VPS13C-204ENST00000395898 UBOX5O94941 541 aa5.54□□□□□ -1.52
VPS13C-204ENST00000395898 CES1P23141 567 aa5.54□□□□□ -1.52
VPS13C-204ENST00000395898 BDNFP23560 247 aa5.54□□□□□ -1.52
VPS13C-204ENST00000395898 TTKP33981 857 aa5.54□□□□□ -1.52
VPS13C-204ENST00000395898 ALFQ53S48 1182 aa5.54□□□□□ -1.52
VPS13C-204ENST00000395898 INO80DQ53TQ3 878 aaPredicted RBP5.54□□□□□ -1.52
VPS13C-204ENST00000395898 CELF3Q5SZQ8 465 aaKnown RBP5.54□□□□□ -1.52
VPS13C-204ENST00000395898 CES5AQ6NT32 575 aa5.54□□□□□ -1.52
VPS13C-204ENST00000395898 CDC73Q6P1J9 531 aa5.54□□□□□ -1.52
VPS13C-204ENST00000395898 LRRC74BQ6ZQY2 392 aa5.54□□□□□ -1.52
VPS13C-204ENST00000395898 NECAB2Q7Z6G3 386 aa5.54□□□□□ -1.52
VPS13C-204ENST00000395898 EXOC3L1Q86VI1 746 aa5.54□□□□□ -1.52
VPS13C-204ENST00000395898 CAMKK1Q8N5S9 505 aa5.54□□□□□ -1.52
VPS13C-204ENST00000395898 LPCAT1Q8NF37 534 aa5.54□□□□□ -1.52
VPS13C-204ENST00000395898 SPATA20Q8TB22 786 aa5.54□□□□□ -1.52
VPS13C-204ENST00000395898 UTP15Q8TED0 518 aaKnown RBP5.54□□□□□ -1.52
VPS13C-204ENST00000395898 MARCH2Q9P0N8 246 aa5.54□□□□□ -1.52
VPS13C-204ENST00000395898 COPG2Q9UBF2 871 aa5.54□□□□□ -1.52
VPS13C-204ENST00000395898 CDH9Q9ULB4 789 aa5.54□□□□□ -1.52
VPS13C-204ENST00000395898 GTF2A1LQ9UNN4 478 aa5.54□□□□□ -1.52
VPS13C-204ENST00000395898 ACTL7BQ9Y614 415 aa5.54□□□□□ -1.52
VPS13C-204ENST00000395898 PRKCIP41743 596 aa5.54□□□□□ -1.52
VPS13C-204ENST00000395898 NME5P56597 212 aa5.54□□□□□ -1.52
VPS13C-204ENST00000395898 SLC34A1Q06495 639 aa5.54□□□□□ -1.52
VPS13C-204ENST00000395898 COX10Q12887 443 aa5.54□□□□□ -1.52
VPS13C-204ENST00000395898 SLC9A5Q14940 896 aa5.54□□□□□ -1.52
VPS13C-204ENST00000395898 ZNF470Q6ECI4 717 aa5.54□□□□□ -1.52
VPS13C-204ENST00000395898 PAGE2Q7Z2X7 111 aa5.54□□□□□ -1.52
VPS13C-204ENST00000395898 FAM228AQ86W67 206 aa5.54□□□□□ -1.52
VPS13C-204ENST00000395898 PIWIL2Q8TC59 973 aaKnown RBP5.54□□□□□ -1.52
VPS13C-204ENST00000395898 DPF3Q92784 378 aa5.54□□□□□ -1.52
VPS13C-204ENST00000395898 CATSPER2Q96P56 530 aa5.54□□□□□ -1.52
VPS13C-204ENST00000395898 SLC25A23Q9BV35 468 aa5.54□□□□□ -1.52
VPS13C-204ENST00000395898 NRDE2Q9H7Z3 1164 aa5.54□□□□□ -1.52
VPS13C-204ENST00000395898 PCYOX1Q9UHG3 505 aa5.54□□□□□ -1.52
VPS13C-204ENST00000395898 ARIH1Q9Y4X5 557 aaPredicted RBP5.54□□□□□ -1.52
VPS13C-204ENST00000395898 COL5A2P05997 1499 aaPredicted RBP5.54□□□□□ -1.52
VPS13C-204ENST00000395898 MYH1P12882 1939 aa5.54□□□□□ -1.52
VPS13C-204ENST00000395898 MYH4Q9Y623 1939 aa5.54□□□□□ -1.52
VPS13C-204ENST00000395898 ADGRB1O14514 1584 aa5.54□□□□□ -1.52
VPS13C-204ENST00000395898 TRAV19A0A0A6YYK7 116 aa5.54□□□□□ -1.52
VPS13C-204ENST00000395898 ADCY6O43306 1168 aa5.54□□□□□ -1.52
VPS13C-204ENST00000395898 PEX1O43933 1283 aa5.54□□□□□ -1.52
VPS13C-204ENST00000395898 ATP6V1G2O95670 118 aa5.54□□□□□ -1.52
VPS13C-204ENST00000395898 ATN1P54259 1190 aaPredicted RBP5.54□□□□□ -1.52
VPS13C-204ENST00000395898 AIF1P55008 147 aa5.54□□□□□ -1.52
VPS13C-204ENST00000395898 SLC44A4Q53GD3 710 aa5.54□□□□□ -1.52
VPS13C-204ENST00000395898 PPP1R15BQ5SWA1 713 aa5.54□□□□□ -1.52
VPS13C-204ENST00000395898 HLA-DQA1Q5Y7H0 255 aa5.54□□□□□ -1.52
VPS13C-204ENST00000395898 IZUMO2Q6UXV1 221 aa5.54□□□□□ -1.52
VPS13C-204ENST00000395898 FIG4Q92562 907 aa5.54□□□□□ -1.52
VPS13C-204ENST00000395898 OXNAD1Q96HP4 312 aaPredicted RBP5.54□□□□□ -1.52
VPS13C-204ENST00000395898 MLPHQ9BV36 600 aaPredicted RBP5.54□□□□□ -1.52
VPS13C-204ENST00000395898 SPRTNQ9H040 489 aaPredicted RBP5.54□□□□□ -1.52
VPS13C-204ENST00000395898 RERGLQ9H628 205 aa5.54□□□□□ -1.52
VPS13C-204ENST00000395898 ATP13A3Q9H7F0 1226 aa5.54□□□□□ -1.52
VPS13C-204ENST00000395898 GDF3Q9NR23 364 aa5.54□□□□□ -1.52
VPS13C-204ENST00000395898 ARL15Q9NXU5 204 aa5.54□□□□□ -1.52
VPS13C-204ENST00000395898 SPEF2Q9C093 1822 aa5.54□□□□□ -1.52
VPS13C-204ENST00000395898 A0A0A0MRY4 1105 aa5.54□□□□□ -1.52
VPS13C-204ENST00000395898 EFCAB10A6NFE3 127 aa5.54□□□□□ -1.52
VPS13C-204ENST00000395898 HS6ST1O60243 411 aa5.54□□□□□ -1.52
VPS13C-204ENST00000395898 MAGEC1O60732 1142 aa5.54□□□□□ -1.52
VPS13C-204ENST00000395898 IL6P05231 212 aa5.54□□□□□ -1.52
VPS13C-204ENST00000395898 ATP4AP20648 1035 aa5.54□□□□□ -1.52
VPS13C-204ENST00000395898 TNFRSF8P28908 595 aa5.54□□□□□ -1.52
VPS13C-204ENST00000395898 TLX1P31314 330 aaPredicted RBP5.54□□□□□ -1.52
VPS13C-204ENST00000395898 NEK3P51956 506 aa5.54□□□□□ -1.52
VPS13C-204ENST00000395898 DPYSL3Q14195 570 aa5.54□□□□□ -1.52
VPS13C-204ENST00000395898 TRIQKQ629K1 86 aa5.54□□□□□ -1.52
VPS13C-204ENST00000395898 C1orf186Q6ZWK4 172 aa5.54□□□□□ -1.52
VPS13C-204ENST00000395898 LPCAT2Q7L5N7 544 aa5.54□□□□□ -1.52
VPS13C-204ENST00000395898 ADGRA1Q86SQ6 560 aa5.54□□□□□ -1.52
VPS13C-204ENST00000395898 NKAPQ8N5F7 415 aaKnown RBP5.54□□□□□ -1.52
VPS13C-204ENST00000395898 SPATA13Q96N96 652 aa5.54□□□□□ -1.52
VPS13C-204ENST00000395898 TRAPPC9Q96Q05 1148 aa5.54□□□□□ -1.52
VPS13C-204ENST00000395898 OMDQ99983 421 aa5.54□□□□□ -1.52
VPS13C-204ENST00000395898 ZNF112Q9UJU3 913 aa5.54□□□□□ -1.52
VPS13C-204ENST00000395898 RAB21Q9UL25 225 aa5.54□□□□□ -1.52
VPS13C-204ENST00000395898 VAV1P15498 845 aa5.54□□□□□ -1.52
VPS13C-204ENST00000395898 ZNF143P52747 638 aaPredicted RBP5.54□□□□□ -1.52
VPS13C-204ENST00000395898 DRG2P55039 364 aaKnown RBP5.54□□□□□ -1.52
VPS13C-204ENST00000395898 GTF2BQ00403 316 aa5.54□□□□□ -1.52
VPS13C-204ENST00000395898 NDUFAF6Q330K2 333 aa5.54□□□□□ -1.52
VPS13C-204ENST00000395898 SPANXN2Q5MJ10 180 aa5.54□□□□□ -1.52
VPS13C-204ENST00000395898 KRT77Q7Z794 578 aa5.54□□□□□ -1.52
VPS13C-204ENST00000395898 ITFG1Q8TB96 612 aa5.54□□□□□ -1.52
VPS13C-204ENST00000395898 MTMR8Q96EF0 704 aa5.54□□□□□ -1.52
VPS13C-204ENST00000395898 PGM2Q96G03 612 aa5.54□□□□□ -1.52
VPS13C-204ENST00000395898 PGLYRP2Q96PD5 576 aa5.54□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms