RNA–Protein interactions for RNA: ENST00000395896.8

VPS13C-203, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13C, Length 14,579 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-203ENST00000395896 C8orf48Q96LL4 319 aa3.45□□□□□ -1.86
VPS13C-203ENST00000395896 PRPF18Q99633 342 aaKnown RBP3.45□□□□□ -1.86
VPS13C-203ENST00000395896 ELAC2Q9BQ52 826 aaKnown RBP3.45□□□□□ -1.86
VPS13C-203ENST00000395896 TBC1D30Q9Y2I9 924 aa3.45□□□□□ -1.86
VPS13C-203ENST00000395896 SIPA1L1O43166 1804 aa3.45□□□□□ -1.86
VPS13C-203ENST00000395896 KLHL33A6NCF5 533 aa3.45□□□□□ -1.86
VPS13C-203ENST00000395896 PRPF4O43172 522 aaKnown RBP eCLIP3.45□□□□□ -1.86
VPS13C-203ENST00000395896 SLURP2P0DP57 97 aa3.45□□□□□ -1.86
VPS13C-203ENST00000395896 ELK3P41970 407 aa3.45□□□□□ -1.86
VPS13C-203ENST00000395896 CKAP5Q14008 2032 aa3.45□□□□□ -1.86
VPS13C-203ENST00000395896 PSMD5Q16401 504 aa3.45□□□□□ -1.86
VPS13C-203ENST00000395896 LONRF1Q17RB8 773 aa3.45□□□□□ -1.86
VPS13C-203ENST00000395896 CRELD2Q6UXH1 353 aaPredicted RBP3.45□□□□□ -1.86
VPS13C-203ENST00000395896 MYO1HQ8N1T3 1032 aa3.45□□□□□ -1.86
VPS13C-203ENST00000395896 NKAPQ8N5F7 415 aaKnown RBP3.45□□□□□ -1.86
VPS13C-203ENST00000395896 CEP70Q8NHQ1 597 aa3.45□□□□□ -1.86
VPS13C-203ENST00000395896 DDX1Q92499 740 aaKnown RBP3.45□□□□□ -1.86
VPS13C-203ENST00000395896 LRGUKQ96M69 825 aa3.45□□□□□ -1.86
VPS13C-203ENST00000395896 MRPL46Q9H2W6 279 aaKnown RBP3.45□□□□□ -1.86
VPS13C-203ENST00000395896 TASP1Q9H6P5 420 aa3.45□□□□□ -1.86
VPS13C-203ENST00000395896 BATF3Q9NR55 127 aa3.45□□□□□ -1.86
VPS13C-203ENST00000395896 KCNK4Q9NYG8 393 aa3.45□□□□□ -1.86
VPS13C-203ENST00000395896 PCDHA11Q9Y5I1 949 aa3.45□□□□□ -1.86
VPS13C-203ENST00000395896 A0A0G2JND7 137 aa3.45□□□□□ -1.86
VPS13C-203ENST00000395896 TMEM114B3SHH9 223 aa3.45□□□□□ -1.86
VPS13C-203ENST00000395896 ATP9BO43861 1147 aa3.45□□□□□ -1.86
VPS13C-203ENST00000395896 HDCP19113 662 aa3.45□□□□□ -1.86
VPS13C-203ENST00000395896 PPIDQ08752 370 aaKnown RBP3.45□□□□□ -1.86
VPS13C-203ENST00000395896 RARS2Q5T160 578 aaKnown RBP3.45□□□□□ -1.86
VPS13C-203ENST00000395896 SLC39A4Q6P5W5 647 aa3.45□□□□□ -1.86
VPS13C-203ENST00000395896 FAM228AQ86W67 206 aa3.45□□□□□ -1.86
VPS13C-203ENST00000395896 ECHDC2Q86YB7 292 aa3.45□□□□□ -1.86
VPS13C-203ENST00000395896 GIPC2Q8TF65 315 aa3.45□□□□□ -1.86
VPS13C-203ENST00000395896 ATL1Q8WXF7 558 aa3.45□□□□□ -1.86
VPS13C-203ENST00000395896 C19orf43Q9BQ61 176 aa3.45□□□□□ -1.86
VPS13C-203ENST00000395896 C11orf84Q9BUA3 381 aaPredicted RBP3.45□□□□□ -1.86
VPS13C-203ENST00000395896 RNF225M0QZC1 329 aaPredicted RBP3.45□□□□□ -1.86
VPS13C-203ENST00000395896 PMPCBO75439 489 aa3.45□□□□□ -1.86
VPS13C-203ENST00000395896 USP1O94782 785 aa3.45□□□□□ -1.86
VPS13C-203ENST00000395896 HAUS5O94927 633 aa3.45□□□□□ -1.86
VPS13C-203ENST00000395896 KLF1Q13351 362 aaPredicted RBP3.45□□□□□ -1.86
VPS13C-203ENST00000395896 XKR4Q5GH76 650 aa3.45□□□□□ -1.86
VPS13C-203ENST00000395896 SEL1L3Q68CR1 1132 aa3.45□□□□□ -1.86
VPS13C-203ENST00000395896 FAM183BPQ6ZVS7 135 aa3.45□□□□□ -1.86
VPS13C-203ENST00000395896 FUKQ8N0W3 1084 aa3.45□□□□□ -1.86
VPS13C-203ENST00000395896 FCRL2Q96LA5 508 aaPredicted RBP3.45□□□□□ -1.86
VPS13C-203ENST00000395896 SLC39A8Q9C0K1 460 aa3.45□□□□□ -1.86
VPS13C-203ENST00000395896 CCDC134Q9H6E4 229 aa3.45□□□□□ -1.86
VPS13C-203ENST00000395896 ANK1P16157 1881 aa3.45□□□□□ -1.86
VPS13C-203ENST00000395896 TRAV19A0A0A6YYK7 116 aa3.45□□□□□ -1.86
VPS13C-203ENST00000395896 CCT8L1PA6NM43 557 aa3.45□□□□□ -1.86
VPS13C-203ENST00000395896 TRIM49D1C9J1S8 452 aa3.45□□□□□ -1.86
VPS13C-203ENST00000395896 KCNK1O00180 336 aa3.45□□□□□ -1.86
VPS13C-203ENST00000395896 GJB1P08034 283 aa3.45□□□□□ -1.86
VPS13C-203ENST00000395896 POU4F1Q01851 419 aa3.45□□□□□ -1.86
VPS13C-203ENST00000395896 GUCY1A3Q02108 690 aa3.45□□□□□ -1.86
VPS13C-203ENST00000395896 MUM1Q2TAK8 710 aa3.45□□□□□ -1.86
VPS13C-203ENST00000395896 ZNF284Q2VY69 593 aa3.45□□□□□ -1.86
VPS13C-203ENST00000395896 NXNQ6DKJ4 435 aa3.45□□□□□ -1.86
VPS13C-203ENST00000395896 DDI1Q8WTU0 396 aa3.45□□□□□ -1.86
VPS13C-203ENST00000395896 NRBF2Q96F24 287 aa3.45□□□□□ -1.86
VPS13C-203ENST00000395896 DCLRE1BQ9H816 532 aa3.45□□□□□ -1.86
VPS13C-203ENST00000395896 PCDH18Q9HCL0 1135 aa3.45□□□□□ -1.86
VPS13C-203ENST00000395896 KLHL11Q9NVR0 708 aa3.45□□□□□ -1.86
VPS13C-203ENST00000395896 IGSF9Q9P2J2 1179 aa3.45□□□□□ -1.86
VPS13C-203ENST00000395896 UBA2Q9UBT2 640 aaPredicted RBP3.45□□□□□ -1.86
VPS13C-203ENST00000395896 HES2Q9Y543 173 aa3.45□□□□□ -1.86
VPS13C-203ENST00000395896 ROS1P08922 2347 aa3.45□□□□□ -1.86
VPS13C-203ENST00000395896 SLC12A8A0AV02 714 aa3.45□□□□□ -1.86
VPS13C-203ENST00000395896 RCCD1A6NED2 376 aa3.45□□□□□ -1.86
VPS13C-203ENST00000395896 TRIM13O60858 407 aa3.45□□□□□ -1.86
VPS13C-203ENST00000395896 SOCS5O75159 536 aa3.45□□□□□ -1.86
VPS13C-203ENST00000395896 GTF2H3Q13889 308 aa3.45□□□□□ -1.86
VPS13C-203ENST00000395896 ACCSLQ4AC99 568 aa3.45□□□□□ -1.86
VPS13C-203ENST00000395896 ANKRD20A2Q5SQ80 823 aa3.45□□□□□ -1.86
VPS13C-203ENST00000395896 ANKRD20A1Q5TYW2 823 aa3.45□□□□□ -1.86
VPS13C-203ENST00000395896 CNKSR3Q6P9H4 555 aa3.45□□□□□ -1.86
VPS13C-203ENST00000395896 SCML4Q8N228 414 aa3.45□□□□□ -1.86
VPS13C-203ENST00000395896 P2RY11Q96G91 374 aa3.45□□□□□ -1.86
VPS13C-203ENST00000395896 EFCAB1Q9HAE3 211 aa3.45□□□□□ -1.86
VPS13C-203ENST00000395896 C8orf4Q9NR00 106 aa3.45□□□□□ -1.86
VPS13C-203ENST00000395896 POLG2Q9UHN1 485 aa3.45□□□□□ -1.86
VPS13C-203ENST00000395896 VPS51Q9UID3 782 aa3.45□□□□□ -1.86
VPS13C-203ENST00000395896 ORC6Q9Y5N6 252 aa3.45□□□□□ -1.86
VPS13C-203ENST00000395896 ENO3P13929 434 aaPredicted RBP3.45□□□□□ -1.86
VPS13C-203ENST00000395896 TRMT5Q32P41 509 aaKnown RBP3.45□□□□□ -1.86
VPS13C-203ENST00000395896 OTOAQ7RTW8 1153 aa3.45□□□□□ -1.86
VPS13C-203ENST00000395896 CD101Q93033 1021 aa3.45□□□□□ -1.86
VPS13C-203ENST00000395896 AZIN2Q96A70 460 aa3.45□□□□□ -1.86
VPS13C-203ENST00000395896 ZFP42Q96MM3 310 aa3.45□□□□□ -1.86
VPS13C-203ENST00000395896 DEFB118Q96PH6 123 aa3.45□□□□□ -1.86
VPS13C-203ENST00000395896 QKIQ96PU8 341 aaKnown RBP eCLIP3.45□□□□□ -1.862e-6■■■■□ 25.8
VPS13C-203ENST00000395896 PPP1R10Q96QC0 940 aaKnown RBP3.45□□□□□ -1.86
VPS13C-203ENST00000395896 TRIM45Q9H8W5 580 aaPredicted RBP3.45□□□□□ -1.86
VPS13C-203ENST00000395896 NMRAL1Q9HBL8 299 aa3.45□□□□□ -1.86
VPS13C-203ENST00000395896 ETNK2Q9NVF9 386 aa3.45□□□□□ -1.86
VPS13C-203ENST00000395896 ARHGAP26Q9UNA1 814 aa3.45□□□□□ -1.86
VPS13C-203ENST00000395896 BACE2Q9Y5Z0 518 aa3.45□□□□□ -1.86
VPS13C-203ENST00000395896 LOC285556D6RIA3 1793 aa3.45□□□□□ -1.86
VPS13C-203ENST00000395896 TBKBP1A7MCY6 615 aa3.44□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms