RNA–Protein interactions for RNA: ENST00000395860.6

VCPKMT-202, Transcript of valosin containing protein lysine methyltransferase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VCPKMT, Length 1,761 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-202ENST00000395860 FDFT1P37268 417 aa20.86■□□□□ 0.93
VCPKMT-202ENST00000395860 IFI35P80217 286 aaPredicted RBP20.86■□□□□ 0.93
VCPKMT-202ENST00000395860 FAM78AQ5JUQ0 283 aa20.86■□□□□ 0.93
VCPKMT-202ENST00000395860 CXorf57Q6NSI4 855 aaKnown RBP20.86■□□□□ 0.93
VCPKMT-202ENST00000395860 HOOK3Q86VS8 718 aa20.86■□□□□ 0.93
VCPKMT-202ENST00000395860 MFN1Q8IWA4 741 aa20.86■□□□□ 0.93
VCPKMT-202ENST00000395860 CCDC117Q8IWD4 279 aaPredicted RBP20.86■□□□□ 0.93
VCPKMT-202ENST00000395860 OR7D4Q8NG98 312 aa20.86■□□□□ 0.93
VCPKMT-202ENST00000395860 NSMCE1Q8WV22 266 aa20.86■□□□□ 0.93
VCPKMT-202ENST00000395860 PRCCQ92733 491 aaPredicted RBP20.86■□□□□ 0.93
VCPKMT-202ENST00000395860 SMARCD2Q92925 531 aa20.86■□□□□ 0.93
VCPKMT-202ENST00000395860 ASB16Q96NS5 453 aa20.86■□□□□ 0.93
VCPKMT-202ENST00000395860 AGAP3Q96P47 875 aa20.86■□□□□ 0.93
VCPKMT-202ENST00000395860 S1PR5Q9H228 398 aa20.86■□□□□ 0.93
VCPKMT-202ENST00000395860 PLK2Q9NYY3 685 aa20.86■□□□□ 0.93
VCPKMT-202ENST00000395860 SMAPO00193 183 aa20.85■□□□□ 0.93
VCPKMT-202ENST00000395860 SLC9A3R1O14745 358 aaPredicted RBP20.85■□□□□ 0.93
VCPKMT-202ENST00000395860 ZBTB24O43167 697 aaPredicted RBP20.85■□□□□ 0.93
VCPKMT-202ENST00000395860 HOXD9P28356 352 aaPredicted RBP20.85■□□□□ 0.93
VCPKMT-202ENST00000395860 ETFBP38117 255 aa20.85■□□□□ 0.93
VCPKMT-202ENST00000395860 IL10RBQ08334 325 aa20.85■□□□□ 0.93
VCPKMT-202ENST00000395860 RNF219Q5W0B1 726 aaPredicted RBP20.85■□□□□ 0.93
VCPKMT-202ENST00000395860 ITPRIPL1Q6GPH6 555 aa20.85■□□□□ 0.93
VCPKMT-202ENST00000395860 ZNF783Q6ZMS7 281 aa20.85■□□□□ 0.93
VCPKMT-202ENST00000395860 MICALL1Q8N3F8 863 aa20.85■□□□□ 0.93
VCPKMT-202ENST00000395860 NAT8LQ8N9F0 302 aa20.85■□□□□ 0.93
VCPKMT-202ENST00000395860 OTUB2Q96DC9 234 aa20.85■□□□□ 0.93
VCPKMT-202ENST00000395860 IL12RB2Q99665 862 aa20.85■□□□□ 0.93
VCPKMT-202ENST00000395860 SPON2Q9BUD6 331 aa20.85■□□□□ 0.93
VCPKMT-202ENST00000395860 MUC3BQ9H195 1237 aa20.85■□□□□ 0.93
VCPKMT-202ENST00000395860 MYOFQ9NZM1 2061 aa20.85■□□□□ 0.93
VCPKMT-202ENST00000395860 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP20.85■□□□□ 0.93
VCPKMT-202ENST00000395860 E7EVH7 732 aa20.85■□□□□ 0.93
VCPKMT-202ENST00000395860 CHADO15335 359 aa20.85■□□□□ 0.93
VCPKMT-202ENST00000395860 VIPR2P41587 438 aa20.85■□□□□ 0.93
VCPKMT-202ENST00000395860 NUMBP49757 651 aa20.85■□□□□ 0.93
VCPKMT-202ENST00000395860 KCNJ11Q14654 390 aa20.85■□□□□ 0.93
VCPKMT-202ENST00000395860 PARP6Q2NL67 630 aa20.85■□□□□ 0.93
VCPKMT-202ENST00000395860 SYCP2LQ5T4T6 812 aa20.85■□□□□ 0.93
VCPKMT-202ENST00000395860 ANKRD22Q5VYY1 191 aa20.85■□□□□ 0.93
VCPKMT-202ENST00000395860 MAML1Q92585 1016 aa20.85■□□□□ 0.93
VCPKMT-202ENST00000395860 FATE1Q969F0 183 aa20.85■□□□□ 0.93
VCPKMT-202ENST00000395860 PABPC5Q96DU9 382 aaKnown RBP20.85■□□□□ 0.93
VCPKMT-202ENST00000395860 TEKT5Q96M29 485 aa20.85■□□□□ 0.93
VCPKMT-202ENST00000395860 RIPOR3Q96MK2 946 aa20.85■□□□□ 0.93
VCPKMT-202ENST00000395860 FAM161BQ96MY7 647 aa20.85■□□□□ 0.93
VCPKMT-202ENST00000395860 ATP13A1Q9HD20 1204 aa20.85■□□□□ 0.93
VCPKMT-202ENST00000395860 IGSF9Q9P2J2 1179 aa20.85■□□□□ 0.93
VCPKMT-202ENST00000395860 RSPH14Q9UHP6 348 aa20.85■□□□□ 0.93
VCPKMT-202ENST00000395860 CDH7Q9ULB5 785 aa20.85■□□□□ 0.93
VCPKMT-202ENST00000395860 HPCAL4Q9UM19 191 aa20.85■□□□□ 0.93
VCPKMT-202ENST00000395860 WNT6Q9Y6F9 365 aa20.85■□□□□ 0.93
VCPKMT-202ENST00000395860 DENND4AQ7Z401 1863 aa20.84■□□□□ 0.93
VCPKMT-202ENST00000395860 F5H423 210 aaPredicted RBP20.84■□□□□ 0.93
VCPKMT-202ENST00000395860 PSMB4P28070 264 aa20.84■□□□□ 0.93
VCPKMT-202ENST00000395860 RENBPP51606 427 aa20.84■□□□□ 0.93
VCPKMT-202ENST00000395860 OXCT1P55809 520 aa20.84■□□□□ 0.93
VCPKMT-202ENST00000395860 DHX9Q08211 1270 aaKnown RBP20.84■□□□□ 0.93
VCPKMT-202ENST00000395860 HNRNPDQ14103 355 aaKnown RBP20.84■□□□□ 0.93
VCPKMT-202ENST00000395860 FSCBQ5H9T9 825 aa20.84■□□□□ 0.93
VCPKMT-202ENST00000395860 CCDC25Q86WR0 208 aa20.84■□□□□ 0.93
VCPKMT-202ENST00000395860 ZCCHC9Q8N567 271 aaKnown RBP20.84■□□□□ 0.93
VCPKMT-202ENST00000395860 EXOC4Q96A65 974 aa20.84■□□□□ 0.93
VCPKMT-202ENST00000395860 GAS2L1Q99501 681 aaPredicted RBP20.84■□□□□ 0.93
VCPKMT-202ENST00000395860 FOXP3Q9BZS1 431 aa20.84■□□□□ 0.93
VCPKMT-202ENST00000395860 TSPYL1Q9H0U9 437 aa20.84■□□□□ 0.93
VCPKMT-202ENST00000395860 LINC00597Q9H2U6 94 aa20.84■□□□□ 0.93
VCPKMT-202ENST00000395860 RBM22Q9NW64 420 aaKnown RBP eCLIP20.84■□□□□ 0.93
VCPKMT-202ENST00000395860 TCRBV7S3A2A0A539 114 aa20.83■□□□□ 0.93
VCPKMT-202ENST00000395860 GOLGA8MH3BSY2 632 aa20.83■□□□□ 0.93
VCPKMT-202ENST00000395860 SOX1O00570 391 aaPredicted RBP20.83■□□□□ 0.93
VCPKMT-202ENST00000395860 KDELR3O43731 214 aa20.83■□□□□ 0.93
VCPKMT-202ENST00000395860 PRAMEF11O60813 436 aa20.83■□□□□ 0.93
VCPKMT-202ENST00000395860 APRTP07741 180 aa20.83■□□□□ 0.93
VCPKMT-202ENST00000395860 LMAN1P49257 510 aa20.83■□□□□ 0.93
VCPKMT-202ENST00000395860 SEMA5AQ13591 1074 aa20.83■□□□□ 0.93
VCPKMT-202ENST00000395860 MARC1Q5VT66 337 aa20.83■□□□□ 0.93
VCPKMT-202ENST00000395860 FYB2Q5VWT5 728 aa20.83■□□□□ 0.93
VCPKMT-202ENST00000395860 TMEM25Q86YD3 366 aa20.83■□□□□ 0.93
VCPKMT-202ENST00000395860 KIAA1958Q8N8K9 716 aa20.83■□□□□ 0.93
VCPKMT-202ENST00000395860 WFDC5Q8TCV5 224 aa20.83■□□□□ 0.93
VCPKMT-202ENST00000395860 BPIFB1Q8TDL5 484 aa20.83■□□□□ 0.93
VCPKMT-202ENST00000395860 IRF7Q92985 503 aa20.83■□□□□ 0.93
VCPKMT-202ENST00000395860 RSPRY1Q96DX4 576 aa20.83■□□□□ 0.93
VCPKMT-202ENST00000395860 PWWP2AQ96N64 755 aa20.83■□□□□ 0.93
VCPKMT-202ENST00000395860 LRRC3BQ96PB8 259 aa20.83■□□□□ 0.93
VCPKMT-202ENST00000395860 GBA3Q9H227 469 aa20.83■□□□□ 0.93
VCPKMT-202ENST00000395860 SPHK2Q9NRA0 654 aa20.83■□□□□ 0.93
VCPKMT-202ENST00000395860 DUS2Q9NX74 493 aaKnown RBP20.83■□□□□ 0.93
VCPKMT-202ENST00000395860 TTLL3Q9Y4R7 772 aa20.83■□□□□ 0.93
VCPKMT-202ENST00000395860 DOCK8Q8NF50 2099 aa20.82■□□□□ 0.92
VCPKMT-202ENST00000395860 TMEM63AO94886 807 aa20.82■□□□□ 0.92
VCPKMT-202ENST00000395860 PEX11BO96011 259 aa20.82■□□□□ 0.92
VCPKMT-202ENST00000395860 NFKB1P19838 968 aa20.82■□□□□ 0.92
VCPKMT-202ENST00000395860 CD68P34810 354 aaPredicted RBP20.82■□□□□ 0.92
VCPKMT-202ENST00000395860 LTBRP36941 435 aa20.82■□□□□ 0.92
VCPKMT-202ENST00000395860 MTHFRP42898 656 aa20.82■□□□□ 0.92
VCPKMT-202ENST00000395860 HDXQ7Z353 690 aa20.82■□□□□ 0.92
VCPKMT-202ENST00000395860 TMC3Q7Z5M5 1100 aa20.82■□□□□ 0.92
VCPKMT-202ENST00000395860 CNTD1Q8N815 330 aa20.82■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms