RNA–Protein interactions for RNA: ENST00000395823.2

HMGB1P10-201, Transcript of high mobility group box 1 pseudogene 10, humanhuman

BASIC

Gene HMGB1P10, Length 563 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P10-201ENST00000395823 ACSL1P33121 698 aa5.39□□□□□ -1.55
HMGB1P10-201ENST00000395823 KRT20P35900 424 aa5.39□□□□□ -1.55
HMGB1P10-201ENST00000395823 CLK3P49761 638 aaKnown RBP5.39□□□□□ -1.55
HMGB1P10-201ENST00000395823 RPL7AP62424 266 aaKnown RBP5.39□□□□□ -1.55
HMGB1P10-201ENST00000395823 RHAGQ02094 409 aa5.39□□□□□ -1.55
HMGB1P10-201ENST00000395823 ABHD18Q0P651 414 aa5.39□□□□□ -1.55
HMGB1P10-201ENST00000395823 EFEMP1Q12805 493 aa5.39□□□□□ -1.55
HMGB1P10-201ENST00000395823 TMEM115Q12893 351 aaPredicted RBP5.39□□□□□ -1.55
HMGB1P10-201ENST00000395823 ZNF169Q14929 603 aaPredicted RBP5.39□□□□□ -1.55
HMGB1P10-201ENST00000395823 KPNB1Q14974 876 aaKnown RBP5.39□□□□□ -1.55
HMGB1P10-201ENST00000395823 PTPAQ15257 358 aa5.39□□□□□ -1.55
HMGB1P10-201ENST00000395823 MED22Q15528 200 aa5.39□□□□□ -1.55
HMGB1P10-201ENST00000395823 IGFL4Q6B9Z1 124 aa5.39□□□□□ -1.55
HMGB1P10-201ENST00000395823 KLHL24Q6TFL4 600 aa5.39□□□□□ -1.55
HMGB1P10-201ENST00000395823 RANBP10Q6VN20 620 aa5.39□□□□□ -1.55
HMGB1P10-201ENST00000395823 TRIM72Q6ZMU5 477 aa5.39□□□□□ -1.55
HMGB1P10-201ENST00000395823 ZNF804AQ7Z570 1209 aa5.39□□□□□ -1.55
HMGB1P10-201ENST00000395823 RASAL3Q86YV0 1011 aa5.39□□□□□ -1.55
HMGB1P10-201ENST00000395823 RHPN2Q8IUC4 686 aa5.39□□□□□ -1.55
HMGB1P10-201ENST00000395823 SCAIQ8N9R8 606 aa5.39□□□□□ -1.55
HMGB1P10-201ENST00000395823 REPS1Q96D71 796 aa5.39□□□□□ -1.55
HMGB1P10-201ENST00000395823 FAM120BQ96EK7 910 aaKnown RBP5.39□□□□□ -1.55
HMGB1P10-201ENST00000395823 SAAL1Q96ER3 474 aa5.39□□□□□ -1.55
HMGB1P10-201ENST00000395823 ADAD1Q96M93 576 aaKnown RBP5.39□□□□□ -1.55
HMGB1P10-201ENST00000395823 CORO1CQ9ULV4 474 aaPredicted RBP5.39□□□□□ -1.55
HMGB1P10-201ENST00000395823 PCDHGB4Q9UN71 923 aa5.39□□□□□ -1.55
HMGB1P10-201ENST00000395823 KCNE2Q9Y6J6 123 aa5.39□□□□□ -1.55
HMGB1P10-201ENST00000395823 CAPN7Q9Y6W3 813 aa5.39□□□□□ -1.55
HMGB1P10-201ENST00000395823 SPATA31A5Q5VU36 1347 aa5.39□□□□□ -1.55
HMGB1P10-201ENST00000395823 SPATA31A6Q5VVP1 1343 aa5.39□□□□□ -1.55
HMGB1P10-201ENST00000395823 SPATA31A7Q8IWB4 1347 aa5.39□□□□□ -1.55
HMGB1P10-201ENST00000395823 COL4A3Q01955 1670 aa5.38□□□□□ -1.55
HMGB1P10-201ENST00000395823 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP5.38□□□□□ -1.55
HMGB1P10-201ENST00000395823 C17orf113A0A1B0GUU1 675 aa5.38□□□□□ -1.55
HMGB1P10-201ENST00000395823 TCRBV7S3A2A0A539 114 aa5.38□□□□□ -1.55
HMGB1P10-201ENST00000395823 PTGES3LE9PB15 166 aa5.38□□□□□ -1.55
HMGB1P10-201ENST00000395823 VILLO15195 856 aa5.38□□□□□ -1.55
HMGB1P10-201ENST00000395823 P4HA2O15460 535 aa5.38□□□□□ -1.55
HMGB1P10-201ENST00000395823 ORC4O43929 436 aa5.38□□□□□ -1.55
HMGB1P10-201ENST00000395823 HBP1O60381 514 aa5.38□□□□□ -1.55
HMGB1P10-201ENST00000395823 SEC14L2O76054 403 aa5.38□□□□□ -1.55
HMGB1P10-201ENST00000395823 ZNF202O95125 648 aa5.38□□□□□ -1.55
HMGB1P10-201ENST00000395823 CCNDBP1O95273 360 aa5.38□□□□□ -1.55
HMGB1P10-201ENST00000395823 ADRB2P07550 413 aa5.38□□□□□ -1.55
HMGB1P10-201ENST00000395823 PLA2G5P39877 138 aa5.38□□□□□ -1.55
HMGB1P10-201ENST00000395823 ARL1P40616 181 aaPredicted RBP5.38□□□□□ -1.55
HMGB1P10-201ENST00000395823 GARSP41250 739 aaKnown RBP5.38□□□□□ -1.55
HMGB1P10-201ENST00000395823 SOX2P48431 317 aa5.38□□□□□ -1.55
HMGB1P10-201ENST00000395823 CTCFP49711 727 aaPredicted RBP5.38□□□□□ -1.55
HMGB1P10-201ENST00000395823 EIF3BP55884 814 aaKnown RBP5.38□□□□□ -1.55
HMGB1P10-201ENST00000395823 NEXNQ0ZGT2 675 aa5.38□□□□□ -1.55
HMGB1P10-201ENST00000395823 BECN1Q14457 450 aa5.38□□□□□ -1.55
HMGB1P10-201ENST00000395823 WTAPQ15007 396 aa5.38□□□□□ -1.55
HMGB1P10-201ENST00000395823 RPE65Q16518 533 aa5.38□□□□□ -1.55
HMGB1P10-201ENST00000395823 RILPL1Q5EBL4 403 aa5.38□□□□□ -1.55
HMGB1P10-201ENST00000395823 ZKSCAN2Q63HK3 967 aa5.38□□□□□ -1.55
HMGB1P10-201ENST00000395823 TMEM65Q6PI78 240 aa5.38□□□□□ -1.55
HMGB1P10-201ENST00000395823 CYP20A1Q6UW02 462 aa5.38□□□□□ -1.55
HMGB1P10-201ENST00000395823 SLC29A4Q7RTT9 530 aa5.38□□□□□ -1.55
HMGB1P10-201ENST00000395823 OR52N4Q8NGI2 321 aa5.38□□□□□ -1.55
HMGB1P10-201ENST00000395823 HSPH1Q92598 858 aa5.38□□□□□ -1.55
HMGB1P10-201ENST00000395823 DAZAP1Q96EP5 407 aaKnown RBP5.38□□□□□ -1.55
HMGB1P10-201ENST00000395823 P2RY11Q96G91 374 aa5.38□□□□□ -1.55
HMGB1P10-201ENST00000395823 ASB2Q96Q27 587 aa5.38□□□□□ -1.55
HMGB1P10-201ENST00000395823 MXD3Q9BW11 206 aa5.38□□□□□ -1.55
HMGB1P10-201ENST00000395823 TRIM2Q9C040 744 aa5.38□□□□□ -1.55
HMGB1P10-201ENST00000395823 SYNCQ9H7C4 482 aa5.38□□□□□ -1.55
HMGB1P10-201ENST00000395823 MMRN2Q9H8L6 949 aa5.38□□□□□ -1.55
HMGB1P10-201ENST00000395823 MLXIPLQ9NP71 852 aa5.38□□□□□ -1.55
HMGB1P10-201ENST00000395823 C20orf141Q9NUB4 165 aa5.38□□□□□ -1.55
HMGB1P10-201ENST00000395823 HCFC1R1Q9NWW0 138 aa5.38□□□□□ -1.55
HMGB1P10-201ENST00000395823 IL1RAPL1Q9NZN1 696 aa5.38□□□□□ -1.55
HMGB1P10-201ENST00000395823 NLKQ9UBE8 527 aa5.38□□□□□ -1.55
HMGB1P10-201ENST00000395823 LIMA1Q9UHB6 759 aaKnown RBP5.38□□□□□ -1.55
HMGB1P10-201ENST00000395823 ADAM21Q9UKJ8 722 aa5.38□□□□□ -1.55
HMGB1P10-201ENST00000395823 LYVE1Q9Y5Y7 322 aa5.38□□□□□ -1.55
HMGB1P10-201ENST00000395823 A0A1W2PQF6 199 aa5.37□□□□□ -1.55
HMGB1P10-201ENST00000395823 SYNDIG1LA6NDD5 238 aa5.37□□□□□ -1.55
HMGB1P10-201ENST00000395823 B4DLN1 442 aa5.37□□□□□ -1.55
HMGB1P10-201ENST00000395823 H7C1Q1 480 aa5.37□□□□□ -1.55
HMGB1P10-201ENST00000395823 GCOM1H8Y6P7 765 aaPredicted RBP5.37□□□□□ -1.55
HMGB1P10-201ENST00000395823 USP12O75317 370 aa5.37□□□□□ -1.55
HMGB1P10-201ENST00000395823 SEC31AO94979 1220 aaKnown RBP5.37□□□□□ -1.55
HMGB1P10-201ENST00000395823 ADAP00813 363 aa5.37□□□□□ -1.55
HMGB1P10-201ENST00000395823 ENO1P06733 434 aaKnown RBP5.37□□□□□ -1.55
HMGB1P10-201ENST00000395823 GALTP07902 379 aa5.37□□□□□ -1.55
HMGB1P10-201ENST00000395823 CSH1P0DML2 217 aa5.37□□□□□ -1.55
HMGB1P10-201ENST00000395823 CSH2P0DML3 217 aa5.37□□□□□ -1.55
HMGB1P10-201ENST00000395823 OAZ1P54368 228 aa5.37□□□□□ -1.55
HMGB1P10-201ENST00000395823 OLR1P78380 273 aa5.37□□□□□ -1.55
HMGB1P10-201ENST00000395823 SIM1P81133 766 aaPredicted RBP5.37□□□□□ -1.55
HMGB1P10-201ENST00000395823 CCDC96Q2M329 555 aa5.37□□□□□ -1.55
HMGB1P10-201ENST00000395823 GLE1Q53GS7 698 aaKnown RBP5.37□□□□□ -1.55
HMGB1P10-201ENST00000395823 TTI2Q6NXR4 508 aa5.37□□□□□ -1.55
HMGB1P10-201ENST00000395823 AADACL2Q6P093 401 aa5.37□□□□□ -1.55
HMGB1P10-201ENST00000395823 CDC73Q6P1J9 531 aa5.37□□□□□ -1.55
HMGB1P10-201ENST00000395823 NCEH1Q6PIU2 408 aa5.37□□□□□ -1.55
HMGB1P10-201ENST00000395823 DHRS13Q6UX07 377 aa5.37□□□□□ -1.55
HMGB1P10-201ENST00000395823 Q6ZPA2 131 aa5.37□□□□□ -1.55
HMGB1P10-201ENST00000395823 RPAP2Q8IXW5 612 aaPredicted RBP5.37□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms