RNA–Protein interactions for RNA: ENST00000395794.2

CXCL12-205, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 1 (best) BASIC

Gene CXCL12, Length 1,052 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-205ENST00000395794 GRIA4P48058 902 aa14.09□□□□□ -0.15
CXCL12-205ENST00000395794 ZNF165P49910 485 aa14.09□□□□□ -0.15
CXCL12-205ENST00000395794 C21orf59P57076 290 aa14.09□□□□□ -0.15
CXCL12-205ENST00000395794 TPM4P67936 248 aa14.09□□□□□ -0.15
CXCL12-205ENST00000395794 SIM1P81133 766 aaPredicted RBP14.09□□□□□ -0.15
CXCL12-205ENST00000395794 SHC2P98077 582 aa14.09□□□□□ -0.15
CXCL12-205ENST00000395794 CCDC15Q0P6D6 951 aa14.09□□□□□ -0.15
CXCL12-205ENST00000395794 FOXC1Q12948 553 aa14.09□□□□□ -0.15
CXCL12-205ENST00000395794 SUZ12Q15022 739 aaKnown RBP14.09□□□□□ -0.15
CXCL12-205ENST00000395794 C15orf59Q2T9L4 293 aaPredicted RBP14.09□□□□□ -0.15
CXCL12-205ENST00000395794 HLA-BQ31612 363 aa14.09□□□□□ -0.15
CXCL12-205ENST00000395794 CCDC14Q49A88 953 aa14.09□□□□□ -0.15
CXCL12-205ENST00000395794 TBC1D3GQ6DHY5 549 aa14.09□□□□□ -0.15
CXCL12-205ENST00000395794 TBC1D3CQ6IPX1 549 aa14.09□□□□□ -0.15
CXCL12-205ENST00000395794 TRNP1Q6NT89 227 aa14.09□□□□□ -0.15
CXCL12-205ENST00000395794 RETSATQ6NUM9 610 aa14.09□□□□□ -0.15
CXCL12-205ENST00000395794 RWDD4Q6NW29 188 aaKnown RBP14.09□□□□□ -0.15
CXCL12-205ENST00000395794 PPP1R2P3Q6NXS1 205 aa14.09□□□□□ -0.15
CXCL12-205ENST00000395794 DNAJC24Q6P3W2 148 aa14.09□□□□□ -0.15
CXCL12-205ENST00000395794 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP14.09□□□□□ -0.15
CXCL12-205ENST00000395794 STRADAQ7RTN6 431 aa14.09□□□□□ -0.15
CXCL12-205ENST00000395794 BNIPLQ7Z465 357 aa14.09□□□□□ -0.15
CXCL12-205ENST00000395794 ZNF683Q8IZ20 524 aa14.09□□□□□ -0.15
CXCL12-205ENST00000395794 TBC1D3Q8IZP1 549 aaPredicted RBP14.09□□□□□ -0.15
CXCL12-205ENST00000395794 SH2D3CQ8N5H7 860 aa14.09□□□□□ -0.15
CXCL12-205ENST00000395794 AADATQ8N5Z0 425 aa14.09□□□□□ -0.15
CXCL12-205ENST00000395794 DCAF4L2Q8NA75 395 aa14.09□□□□□ -0.15
CXCL12-205ENST00000395794 OR52K2Q8NGK3 314 aa14.09□□□□□ -0.15
CXCL12-205ENST00000395794 C1orf216Q8TAB5 229 aa14.09□□□□□ -0.15
CXCL12-205ENST00000395794 PCDHB18PQ96TA0 734 aa14.09□□□□□ -0.15
CXCL12-205ENST00000395794 ACE2Q9BYF1 805 aaPredicted RBP14.09□□□□□ -0.15
CXCL12-205ENST00000395794 HSD3B7Q9H2F3 369 aa14.09□□□□□ -0.15
CXCL12-205ENST00000395794 TMPRSS4Q9NRS4 437 aa14.09□□□□□ -0.15
CXCL12-205ENST00000395794 PPARGC1AQ9UBK2 798 aaKnown RBP14.09□□□□□ -0.15
CXCL12-205ENST00000395794 OR12D3Q9UGF7 316 aa14.09□□□□□ -0.15
CXCL12-205ENST00000395794 SERGEFQ9UGK8 458 aa14.09□□□□□ -0.15
CXCL12-205ENST00000395794 VPS51Q9UID3 782 aa14.09□□□□□ -0.15
CXCL12-205ENST00000395794 MYO6Q9UM54 1294 aa14.09□□□□□ -0.15
CXCL12-205ENST00000395794 HS3ST2Q9Y278 367 aa14.09□□□□□ -0.15
CXCL12-205ENST00000395794 CEP192Q8TEP8 1941 aa14.09□□□□□ -0.15
CXCL12-205ENST00000395794 SPAARA0A1B0GVQ0 90 aa14.08□□□□□ -0.16
CXCL12-205ENST00000395794 CBX4O00257 560 aa14.08□□□□□ -0.16
CXCL12-205ENST00000395794 MCF2LO15068 1137 aa14.08□□□□□ -0.16
CXCL12-205ENST00000395794 SLC7A4O43246 635 aa14.08□□□□□ -0.16
CXCL12-205ENST00000395794 IGHV4-34P06331 123 aa14.08□□□□□ -0.16
CXCL12-205ENST00000395794 ZNF883P0CG24 379 aa14.08□□□□□ -0.16
CXCL12-205ENST00000395794 CD59P13987 128 aa14.08□□□□□ -0.16
CXCL12-205ENST00000395794 TNFAIP3P21580 790 aa14.08□□□□□ -0.16
CXCL12-205ENST00000395794 GPD1P21695 349 aa14.08□□□□□ -0.16
CXCL12-205ENST00000395794 ETFBP38117 255 aa14.08□□□□□ -0.16
CXCL12-205ENST00000395794 CCR5P51681 352 aa14.08□□□□□ -0.16
CXCL12-205ENST00000395794 ADPRHP54922 357 aa14.08□□□□□ -0.16
CXCL12-205ENST00000395794 RACK1P63244 317 aaKnown RBP14.08□□□□□ -0.16
CXCL12-205ENST00000395794 SLC45A4Q5BKX6 768 aa14.08□□□□□ -0.16
CXCL12-205ENST00000395794 Q6ZVU0 165 aa14.08□□□□□ -0.16
CXCL12-205ENST00000395794 APTXQ7Z2E3 356 aaKnown RBP14.08□□□□□ -0.16
CXCL12-205ENST00000395794 NAXDQ8IW45 347 aa14.08□□□□□ -0.16
CXCL12-205ENST00000395794 DRC7Q8IY82 874 aa14.08□□□□□ -0.16
CXCL12-205ENST00000395794 C3orf20Q8ND61 904 aa14.08□□□□□ -0.16
CXCL12-205ENST00000395794 JOSD2Q8TAC2 188 aa14.08□□□□□ -0.16
CXCL12-205ENST00000395794 SETD7Q8WTS6 366 aaKnown RBP14.08□□□□□ -0.16
CXCL12-205ENST00000395794 FAM172AQ8WUF8 416 aa14.08□□□□□ -0.16
CXCL12-205ENST00000395794 OSBPL2Q9H1P3 480 aa14.08□□□□□ -0.16
CXCL12-205ENST00000395794 KDM4CQ9H3R0 1056 aa14.08□□□□□ -0.16
CXCL12-205ENST00000395794 RETREG1Q9H6L5 497 aa14.08□□□□□ -0.16
CXCL12-205ENST00000395794 ATP13A1Q9HD20 1204 aa14.08□□□□□ -0.16
CXCL12-205ENST00000395794 RTN4Q9NQC3 1192 aaKnown RBP14.08□□□□□ -0.16
CXCL12-205ENST00000395794 DYRK4Q9NR20 520 aa14.08□□□□□ -0.16
CXCL12-205ENST00000395794 TM7SF3Q9NS93 570 aa14.08□□□□□ -0.16
CXCL12-205ENST00000395794 ANKRD6Q9Y2G4 727 aa14.08□□□□□ -0.16
CXCL12-205ENST00000395794 A0A0D9SEW6 157 aa14.07□□□□□ -0.16
CXCL12-205ENST00000395794 A0A1W2PPC4 97 aa14.07□□□□□ -0.16
CXCL12-205ENST00000395794 SIGLEC16A6NMB1 481 aa14.07□□□□□ -0.16
CXCL12-205ENST00000395794 SH3BP5O60239 455 aa14.07□□□□□ -0.16
CXCL12-205ENST00000395794 SNAP91O60641 907 aa14.07□□□□□ -0.16
CXCL12-205ENST00000395794 GJB3O75712 270 aa14.07□□□□□ -0.16
CXCL12-205ENST00000395794 SERPINC1P01008 464 aa14.07□□□□□ -0.16
CXCL12-205ENST00000395794 SRCP12931 536 aa14.07□□□□□ -0.16
CXCL12-205ENST00000395794 RFC1P35251 1148 aaPredicted RBP14.07□□□□□ -0.16
CXCL12-205ENST00000395794 GSCP56915 257 aaPredicted RBP14.07□□□□□ -0.16
CXCL12-205ENST00000395794 GNA12Q03113 381 aa14.07□□□□□ -0.16
CXCL12-205ENST00000395794 SLC20A2Q08357 652 aa14.07□□□□□ -0.16
CXCL12-205ENST00000395794 PTP4A2Q12974 167 aa14.07□□□□□ -0.16
CXCL12-205ENST00000395794 TRIP6Q15654 476 aaKnown RBP14.07□□□□□ -0.16
CXCL12-205ENST00000395794 KIF19Q2TAC6 998 aa14.07□□□□□ -0.16
CXCL12-205ENST00000395794 DCUN1D2Q6PH85 259 aa14.07□□□□□ -0.16
CXCL12-205ENST00000395794 PRPF39Q86UA1 669 aaKnown RBP14.07□□□□□ -0.16
CXCL12-205ENST00000395794 PIP4K2CQ8TBX8 421 aa14.07□□□□□ -0.16
CXCL12-205ENST00000395794 SLC39A7Q92504 469 aa14.07□□□□□ -0.16
CXCL12-205ENST00000395794 PSMB7Q99436 277 aa14.07□□□□□ -0.16
CXCL12-205ENST00000395794 IL21RQ9HBE5 538 aa14.07□□□□□ -0.16
CXCL12-205ENST00000395794 AASDHPPTQ9NRN7 309 aa14.07□□□□□ -0.16
CXCL12-205ENST00000395794 PPM1HQ9ULR3 514 aa14.07□□□□□ -0.16
CXCL12-205ENST00000395794 HPCAL4Q9UM19 191 aa14.07□□□□□ -0.16
CXCL12-205ENST00000395794 SNX11Q9Y5W9 270 aa14.07□□□□□ -0.16
CXCL12-205ENST00000395794 VILLO15195 856 aa14.06□□□□□ -0.16
CXCL12-205ENST00000395794 TEX33O43247 280 aa14.06□□□□□ -0.16
CXCL12-205ENST00000395794 DFNA5O60443 496 aa14.06□□□□□ -0.16
CXCL12-205ENST00000395794 TRIM16O95361 564 aa14.06□□□□□ -0.16
CXCL12-205ENST00000395794 GJB6O95452 261 aa14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms