RNA–Protein interactions for RNA: ENST00000395354.1

LMNB1-202, Transcript of lamin B1, humanhuman

TSL 1 (best) BASIC

Gene LMNB1, Length 1,572 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-202ENST00000395354 SLC22A12Q96S37 553 aa19.75■□□□□ 0.75
LMNB1-202ENST00000395354 VAT1Q99536 393 aa19.75■□□□□ 0.75
LMNB1-202ENST00000395354 CAPS2Q9BXY5 557 aa19.75■□□□□ 0.75
LMNB1-202ENST00000395354 SLC12A6Q9UHW9 1150 aa19.75■□□□□ 0.75
LMNB1-202ENST00000395354 ZMYM5Q9UJ78 669 aa19.75■□□□□ 0.75
LMNB1-202ENST00000395354 DNMT3LQ9UJW3 386 aa19.75■□□□□ 0.75
LMNB1-202ENST00000395354 SNX10Q9Y5X0 201 aa19.75■□□□□ 0.75
LMNB1-202ENST00000395354 WASH4PA8MWX3 477 aa19.74■□□□□ 0.75
LMNB1-202ENST00000395354 MBTPS2O43462 519 aa19.74■□□□□ 0.75
LMNB1-202ENST00000395354 CDH16O75309 829 aa19.74■□□□□ 0.75
LMNB1-202ENST00000395354 SPAG6O75602 509 aa19.74■□□□□ 0.75
LMNB1-202ENST00000395354 APOEP02649 317 aa19.74■□□□□ 0.75
LMNB1-202ENST00000395354 SARNPP82979 210 aaKnown RBP19.74■□□□□ 0.75
LMNB1-202ENST00000395354 RING1Q06587 406 aa19.74■□□□□ 0.75
LMNB1-202ENST00000395354 WASHC5Q12768 1159 aa19.74■□□□□ 0.75
LMNB1-202ENST00000395354 LONRF1Q17RB8 773 aa19.74■□□□□ 0.75
LMNB1-202ENST00000395354 PARP6Q2NL67 630 aa19.74■□□□□ 0.75
LMNB1-202ENST00000395354 BBS9Q3SYG4 887 aa19.74■□□□□ 0.75
LMNB1-202ENST00000395354 LEXMQ3ZCV2 418 aa19.74■□□□□ 0.75
LMNB1-202ENST00000395354 MSS51Q4VC12 460 aa19.74■□□□□ 0.75
LMNB1-202ENST00000395354 DNAJC21Q5F1R6 531 aaKnown RBP19.74■□□□□ 0.75
LMNB1-202ENST00000395354 POTEHQ6S545 545 aa19.74■□□□□ 0.75
LMNB1-202ENST00000395354 NPAS3Q8IXF0 933 aa19.74■□□□□ 0.75
LMNB1-202ENST00000395354 NPWQ8N729 165 aa19.74■□□□□ 0.75
LMNB1-202ENST00000395354 ATP6V0D2Q8N8Y2 350 aa19.74■□□□□ 0.75
LMNB1-202ENST00000395354 ZSWIM3Q96MP5 696 aa19.74■□□□□ 0.75
LMNB1-202ENST00000395354 SIK2Q9H0K1 926 aa19.74■□□□□ 0.75
LMNB1-202ENST00000395354 CNOT10Q9H9A5 744 aaKnown RBP19.74■□□□□ 0.75
LMNB1-202ENST00000395354 VPS37BQ9H9H4 285 aa19.74■□□□□ 0.75
LMNB1-202ENST00000395354 IGSF9Q9P2J2 1179 aa19.74■□□□□ 0.75
LMNB1-202ENST00000395354 DYNC1LI1Q9Y6G9 523 aaKnown RBP19.74■□□□□ 0.75
LMNB1-202ENST00000395354 OLFM2O95897 454 aa19.74■□□□□ 0.75
LMNB1-202ENST00000395354 CKMP06732 381 aa19.74■□□□□ 0.75
LMNB1-202ENST00000395354 APRTP07741 180 aa19.74■□□□□ 0.75
LMNB1-202ENST00000395354 AVPR1AP37288 418 aa19.74■□□□□ 0.75
LMNB1-202ENST00000395354 GARSP41250 739 aaKnown RBP19.74■□□□□ 0.75
LMNB1-202ENST00000395354 TAOK1Q7L7X3 1001 aa19.74■□□□□ 0.75
LMNB1-202ENST00000395354 MIB1Q86YT6 1006 aa19.74■□□□□ 0.75
LMNB1-202ENST00000395354 CMTM8Q8IZV2 173 aa19.74■□□□□ 0.75
LMNB1-202ENST00000395354 CCDC33Q8N5R6 958 aa19.74■□□□□ 0.75
LMNB1-202ENST00000395354 FBXO36Q8NEA4 188 aa19.74■□□□□ 0.75
LMNB1-202ENST00000395354 LRRN4Q8WUT4 740 aa19.74■□□□□ 0.75
LMNB1-202ENST00000395354 XAB2Q9HCS7 855 aaKnown RBP19.74■□□□□ 0.75
LMNB1-202ENST00000395354 DONSONQ9NYP3 566 aa19.74■□□□□ 0.75
LMNB1-202ENST00000395354 GDE1Q9NZC3 331 aa19.74■□□□□ 0.75
LMNB1-202ENST00000395354 MARCH2Q9P0N8 246 aa19.74■□□□□ 0.75
LMNB1-202ENST00000395354 TRHDEQ9UKU6 1024 aa19.74■□□□□ 0.75
LMNB1-202ENST00000395354 HS3ST4Q9Y661 456 aa19.74■□□□□ 0.75
LMNB1-202ENST00000395354 TEX264Q9Y6I9 313 aa19.74■□□□□ 0.75
LMNB1-202ENST00000395354 SMIM23A6NLE4 172 aa19.73■□□□□ 0.75
LMNB1-202ENST00000395354 IGLV3-27P01718 113 aa19.73■□□□□ 0.75
LMNB1-202ENST00000395354 MBL2P11226 248 aaPredicted RBP19.73■□□□□ 0.75
LMNB1-202ENST00000395354 MLNP12872 115 aa19.73■□□□□ 0.75
LMNB1-202ENST00000395354 MAGEA3P43357 314 aa19.73■□□□□ 0.75
LMNB1-202ENST00000395354 SLCO1A2P46721 670 aa19.73■□□□□ 0.75
LMNB1-202ENST00000395354 GPX6P59796 221 aa19.73■□□□□ 0.75
LMNB1-202ENST00000395354 ARTNQ5T4W7 220 aa19.73■□□□□ 0.75
LMNB1-202ENST00000395354 RWDD4Q6NW29 188 aaKnown RBP19.73■□□□□ 0.75
LMNB1-202ENST00000395354 LRRC49Q8IUZ0 686 aa19.73■□□□□ 0.75
LMNB1-202ENST00000395354 PALM2Q8IXS6 379 aa19.73■□□□□ 0.75
LMNB1-202ENST00000395354 BTN2A3PQ96KV6 586 aa19.73■□□□□ 0.75
LMNB1-202ENST00000395354 TSGA13Q96PP4 275 aa19.73■□□□□ 0.75
LMNB1-202ENST00000395354 PRDM6Q9NQX0 595 aa19.73■□□□□ 0.75
LMNB1-202ENST00000395354 PPARGC1AQ9UBK2 798 aaKnown RBP19.73■□□□□ 0.75
LMNB1-202ENST00000395354 SLC24A2Q9UI40 661 aa19.73■□□□□ 0.75
LMNB1-202ENST00000395354 CDH7Q9ULB5 785 aa19.73■□□□□ 0.75
LMNB1-202ENST00000395354 EXOC1LA0A1B0GW35 172 aa19.72■□□□□ 0.75
LMNB1-202ENST00000395354 E9PAM4 449 aa19.72■□□□□ 0.75
LMNB1-202ENST00000395354 GSTA2P09210 222 aa19.72■□□□□ 0.75
LMNB1-202ENST00000395354 GBP2P32456 591 aaPredicted RBP19.72■□□□□ 0.75
LMNB1-202ENST00000395354 HPDP32754 393 aaPredicted RBP19.72■□□□□ 0.75
LMNB1-202ENST00000395354 SLC7A9P82251 487 aa19.72■□□□□ 0.75
LMNB1-202ENST00000395354 NR1H3Q13133 447 aa19.72■□□□□ 0.75
LMNB1-202ENST00000395354 FAXCQ5TGI0 409 aa19.72■□□□□ 0.75
LMNB1-202ENST00000395354 CAND1Q86VP6 1230 aaKnown RBP19.72■□□□□ 0.75
LMNB1-202ENST00000395354 ANKMY2Q8IV38 441 aa19.72■□□□□ 0.75
LMNB1-202ENST00000395354 ZNF567Q8N184 647 aa19.72■□□□□ 0.75
LMNB1-202ENST00000395354 ZSCAN18Q8TBC5 510 aaPredicted RBP19.72■□□□□ 0.75
LMNB1-202ENST00000395354 MYADMQ96S97 322 aa19.72■□□□□ 0.75
LMNB1-202ENST00000395354 WDR83Q9BRX9 315 aaKnown RBP19.72■□□□□ 0.75
LMNB1-202ENST00000395354 EURLQ9NYK6 297 aa19.72■□□□□ 0.75
LMNB1-202ENST00000395354 HBS1LQ9Y450 684 aaKnown RBP19.72■□□□□ 0.75
LMNB1-202ENST00000395354 SLC12A8A0AV02 714 aa19.71■□□□□ 0.75
LMNB1-202ENST00000395354 CCNCP24863 283 aa19.71■□□□□ 0.75
LMNB1-202ENST00000395354 PTPN3P26045 913 aa19.71■□□□□ 0.75
LMNB1-202ENST00000395354 MDH1P40925 334 aaKnown RBP19.71■□□□□ 0.75
LMNB1-202ENST00000395354 ELK3P41970 407 aa19.71■□□□□ 0.75
LMNB1-202ENST00000395354 ATP1A2P50993 1020 aa19.71■□□□□ 0.75
LMNB1-202ENST00000395354 IFI35P80217 286 aaPredicted RBP19.71■□□□□ 0.75
LMNB1-202ENST00000395354 TFF2Q03403 129 aa19.71■□□□□ 0.75
LMNB1-202ENST00000395354 KLHL38Q2WGJ6 581 aa19.71■□□□□ 0.75
LMNB1-202ENST00000395354 HP1BP3Q5SSJ5 553 aaPredicted RBP19.71■□□□□ 0.75
LMNB1-202ENST00000395354 C3orf62Q6ZUJ4 267 aa19.71■□□□□ 0.75
LMNB1-202ENST00000395354 ARID3BQ8IVW6 561 aaPredicted RBP19.71■□□□□ 0.75
LMNB1-202ENST00000395354 RTL3Q8N8U3 475 aaKnown RBP19.71■□□□□ 0.75
LMNB1-202ENST00000395354 KLF16Q9BXK1 252 aaPredicted RBP19.71■□□□□ 0.75
LMNB1-202ENST00000395354 SMG9Q9H0W8 520 aaKnown RBP19.71■□□□□ 0.75
LMNB1-202ENST00000395354 GKN1Q9NS71 199 aa19.71■□□□□ 0.75
LMNB1-202ENST00000395354 SMPD4Q9NXE4 827 aa19.71■□□□□ 0.75
LMNB1-202ENST00000395354 SRRM3A6NNA2 597 aaPredicted RBP19.7■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms