RNA–Protein interactions for RNA: ENST00000394991.7

SNCA-205, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNCA, Length 1,290 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-205ENST00000394991 PITX1P78337 314 aaPredicted RBP16.28■□□□□ 0.2
SNCA-205ENST00000394991 SKOR1P84550 965 aa16.28■□□□□ 0.2
SNCA-205ENST00000394991 SULT2A1Q06520 285 aa16.28■□□□□ 0.2
SNCA-205ENST00000394991 HS1BP3Q53T59 392 aa16.28■□□□□ 0.2
SNCA-205ENST00000394991 PIP5KL1Q5T9C9 394 aa16.28■□□□□ 0.2
SNCA-205ENST00000394991 FAM46CQ5VWP2 391 aa16.28■□□□□ 0.2
SNCA-205ENST00000394991 KIAA1614Q5VZ46 1190 aa16.28■□□□□ 0.2
SNCA-205ENST00000394991 Q6ZVU0 165 aa16.28■□□□□ 0.2
SNCA-205ENST00000394991 DSG4Q86SJ6 1040 aa16.28■□□□□ 0.2
SNCA-205ENST00000394991 SLC22A18ASQ8N1D0 253 aa16.28■□□□□ 0.2
SNCA-205ENST00000394991 OR52K2Q8NGK3 314 aa16.28■□□□□ 0.2
SNCA-205ENST00000394991 FAM149B1Q96BN6 582 aa16.28■□□□□ 0.2
SNCA-205ENST00000394991 ALG14Q96F25 216 aa16.28■□□□□ 0.2
SNCA-205ENST00000394991 PRMT1Q99873 361 aaKnown RBP16.28■□□□□ 0.2
SNCA-205ENST00000394991 DPH1Q9BZG8 443 aa16.28■□□□□ 0.2
SNCA-205ENST00000394991 OSBPL2Q9H1P3 480 aa16.28■□□□□ 0.2
SNCA-205ENST00000394991 TJP2Q9UDY2 1190 aa16.28■□□□□ 0.2
SNCA-205ENST00000394991 PCDHB4Q9Y5E5 795 aa16.28■□□□□ 0.2
SNCA-205ENST00000394991 FAM237AA0A1B0GTK4 181 aa16.27■□□□□ 0.2
SNCA-205ENST00000394991 A0A1W2PQU0 124 aa16.27■□□□□ 0.2
SNCA-205ENST00000394991 C1QTNF3-AMACRE9PGA6 284 aa16.27■□□□□ 0.2
SNCA-205ENST00000394991 F5H5T6 163 aa16.27■□□□□ 0.2
SNCA-205ENST00000394991 IGLV3-25P01717 112 aa16.27■□□□□ 0.2
SNCA-205ENST00000394991 GP1BAP07359 652 aa16.27■□□□□ 0.2
SNCA-205ENST00000394991 CTSLP07711 333 aa16.27■□□□□ 0.2
SNCA-205ENST00000394991 HSP90AA1P07900 732 aaKnown RBP16.27■□□□□ 0.2
SNCA-205ENST00000394991 RPL34P49207 117 aaKnown RBP16.27■□□□□ 0.2
SNCA-205ENST00000394991 VASPP50552 380 aaPredicted RBP16.27■□□□□ 0.2
SNCA-205ENST00000394991 IRAK1P51617 712 aa16.27■□□□□ 0.2
SNCA-205ENST00000394991 DLG2Q15700 870 aa16.27■□□□□ 0.2
SNCA-205ENST00000394991 ISXQ2M1V0 245 aa16.27■□□□□ 0.2
SNCA-205ENST00000394991 ZNF284Q2VY69 593 aa16.27■□□□□ 0.2
SNCA-205ENST00000394991 C3orf38Q5JPI3 329 aa16.27■□□□□ 0.2
SNCA-205ENST00000394991 IGF2-ASQ6U949 168 aa16.27■□□□□ 0.2
SNCA-205ENST00000394991 GCNT7Q6ZNI0 430 aa16.27■□□□□ 0.2
SNCA-205ENST00000394991 ERCC4Q92889 916 aaPredicted RBP16.27■□□□□ 0.2
SNCA-205ENST00000394991 SLC35C1Q96A29 364 aa16.27■□□□□ 0.2
SNCA-205ENST00000394991 MED8Q96G25 268 aa16.27■□□□□ 0.2
SNCA-205ENST00000394991 BTN2A3PQ96KV6 586 aa16.27■□□□□ 0.2
SNCA-205ENST00000394991 CALN1Q9BXU9 219 aa16.27■□□□□ 0.2
SNCA-205ENST00000394991 THSD1Q9NS62 852 aa16.27■□□□□ 0.2
SNCA-205ENST00000394991 NLGN3Q9NZ94 848 aa16.27■□□□□ 0.2
SNCA-205ENST00000394991 SATB2Q9UPW6 733 aa16.27■□□□□ 0.2
SNCA-205ENST00000394991 AHCTF1Q8WYP5 2266 aa16.26■□□□□ 0.19
SNCA-205ENST00000394991 PMS2P1A4D2B8 440 aa16.26■□□□□ 0.19
SNCA-205ENST00000394991 RNF103O00237 685 aa16.26■□□□□ 0.19
SNCA-205ENST00000394991 MCF2LO15068 1137 aa16.26■□□□□ 0.19
SNCA-205ENST00000394991 ALOX15BO15296 676 aa16.26■□□□□ 0.19
SNCA-205ENST00000394991 SLC16A3O15427 465 aaKnown RBP16.26■□□□□ 0.19
SNCA-205ENST00000394991 SLC28A2O43868 658 aa16.26■□□□□ 0.19
SNCA-205ENST00000394991 NEBLO76041 1014 aa16.26■□□□□ 0.19
SNCA-205ENST00000394991 WISP1O95388 367 aa16.26■□□□□ 0.19
SNCA-205ENST00000394991 CLDN2P57739 230 aa16.26■□□□□ 0.19
SNCA-205ENST00000394991 CENPCQ03188 943 aa16.26■□□□□ 0.19
SNCA-205ENST00000394991 KCNC4Q03721 635 aa16.26■□□□□ 0.19
SNCA-205ENST00000394991 EIF4EBP2Q13542 120 aaPredicted RBP16.26■□□□□ 0.19
SNCA-205ENST00000394991 STILQ15468 1287 aa16.26■□□□□ 0.19
SNCA-205ENST00000394991 ACCSLQ4AC99 568 aa16.26■□□□□ 0.19
SNCA-205ENST00000394991 ZNF542PQ5EBM4 170 aa16.26■□□□□ 0.19
SNCA-205ENST00000394991 KRBA2Q6ZNG9 492 aa16.26■□□□□ 0.19
SNCA-205ENST00000394991 BEND5Q7L4P6 421 aa16.26■□□□□ 0.19
SNCA-205ENST00000394991 IFI44Q8TCB0 444 aa16.26■□□□□ 0.19
SNCA-205ENST00000394991 MAPK15Q8TD08 544 aa16.26■□□□□ 0.19
SNCA-205ENST00000394991 ARRDC3Q96B67 414 aa16.26■□□□□ 0.19
SNCA-205ENST00000394991 PRR11Q96HE9 360 aaPredicted RBP16.26■□□□□ 0.19
SNCA-205ENST00000394991 ZFR2Q9UPR6 939 aaKnown RBP16.26■□□□□ 0.19
SNCA-205ENST00000394991 OR51B4Q9Y5P0 310 aa16.26■□□□□ 0.19
SNCA-205ENST00000394991 TLN1Q9Y490 2541 aaKnown RBP16.26■□□□□ 0.19
SNCA-205ENST00000394991 TCAF2A6NFQ2 919 aa16.25■□□□□ 0.19
SNCA-205ENST00000394991 KCNU1A8MYU2 1149 aa16.25■□□□□ 0.19
SNCA-205ENST00000394991 K7ENP7 123 aa16.25■□□□□ 0.19
SNCA-205ENST00000394991 K7ESM1 405 aa16.25■□□□□ 0.19
SNCA-205ENST00000394991 SCAMP1O15126 338 aa16.25■□□□□ 0.19
SNCA-205ENST00000394991 BNIP3LO60238 219 aa16.25■□□□□ 0.19
SNCA-205ENST00000394991 TRUB2O95900 331 aaKnown RBP16.25■□□□□ 0.19
SNCA-205ENST00000394991 ALPPL2P10696 532 aa16.25■□□□□ 0.19
SNCA-205ENST00000394991 TGM2P21980 687 aa16.25■□□□□ 0.19
SNCA-205ENST00000394991 HNRNPA2B1P22626 353 aaKnown RBP16.25■□□□□ 0.19
SNCA-205ENST00000394991 GPD2P43304 727 aa16.25■□□□□ 0.19
SNCA-205ENST00000394991 NUCB2P80303 420 aa16.25■□□□□ 0.19
SNCA-205ENST00000394991 INO80CQ6PI98 192 aaPredicted RBP16.25■□□□□ 0.19
SNCA-205ENST00000394991 ABI3BPQ7Z7G0 1075 aa16.25■□□□□ 0.19
SNCA-205ENST00000394991 HORMAD1Q86X24 394 aa16.25■□□□□ 0.19
SNCA-205ENST00000394991 SH2D3CQ8N5H7 860 aa16.25■□□□□ 0.19
SNCA-205ENST00000394991 ATP6V0D2Q8N8Y2 350 aa16.25■□□□□ 0.19
SNCA-205ENST00000394991 ATXN7L3BQ96GX2 97 aa16.25■□□□□ 0.19
SNCA-205ENST00000394991 ST7Q9NRC1 585 aa16.25■□□□□ 0.19
SNCA-205ENST00000394991 SLC25A13Q9UJS0 675 aa16.25■□□□□ 0.19
SNCA-205ENST00000394991 UBR5O95071 2799 aaPredicted RBP16.25■□□□□ 0.19
SNCA-205ENST00000394991 DOCK4Q8N1I0 1966 aa16.24■□□□□ 0.19
SNCA-205ENST00000394991 SCN8AQ9UQD0 1980 aa16.24■□□□□ 0.19
SNCA-205ENST00000394991 DOPEY2Q9Y3R5 2298 aa16.24■□□□□ 0.19
SNCA-205ENST00000394991 SART1O43290 800 aaKnown RBP16.24■□□□□ 0.19
SNCA-205ENST00000394991 ZNF18P17022 549 aa16.24■□□□□ 0.19
SNCA-205ENST00000394991 AKT2P31751 481 aa16.24■□□□□ 0.19
SNCA-205ENST00000394991 DUSP3P51452 185 aaPredicted RBP16.24■□□□□ 0.19
SNCA-205ENST00000394991 PMS1P54277 932 aaKnown RBP16.24■□□□□ 0.19
SNCA-205ENST00000394991 TTC39BQ5VTQ0 682 aaPredicted RBP16.24■□□□□ 0.19
SNCA-205ENST00000394991 SEL1L3Q68CR1 1132 aa16.24■□□□□ 0.19
SNCA-205ENST00000394991 OR6B2Q6IFH4 312 aa16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms